Evolution strategies applied to the problem of line profile decomposition in QSO spectra

We describe the decomposition of QSO absorption line ensembles applying an evolutionary forward modelling technique. The modelling is optimized using an evolution strategy (ES) based on a novel concept of completely derandomized self-adaption. The algorithm is described in detail. Its global optimization performance in decomposing a series of simulated test spectra is compared to that of classical deterministic algorithms. Our comparison demonstrates that the ES is a highly competitive algorithm capable to calculate the optimal decomposition without requiring any particular initialization.Comment: 9 pages, 5 figures, accepted for publication in Astron. Astrophys., corrected figure misplacements, full resolution manuscript can be obtained at http://www.hs.uni-hamburg.de/EN/Ins/Per/Quast

Fragment distribution of thermal decomposition for PS and PET with QMD calculations by considering the excited and charged model molecules

金沢大学理工研究域物質化学系Simulations by a quantum molecular dynamics (QMD) (MD with MO) method were demonstrated on the thermal decomposition of PS and PET polymers using the model molecules at the ground state including excited and positive charged states. For the excited and positive charged model molecules, we adopted CH3CHC6H5CH3 and CH3OCOC6H4COOCH3 of PS and PET monomers, respectively at the singlet and triplet states in single excitation, and at (+2) positive charged state by semiempirical AM1 MO method. Geometry and energy optimized results of the excited and positive charged models by MO calculations were used as the initial MD step of QMD calculations. In the QMD calculations, we controlled the total energy of the system using Nosé-Hoover thermostats in the total energy range of 0.69-0.95 eV, and the sampling position data with a time step of 0.5 fs were carried out up to 5000 steps at 60 different initial conditions. The calculated neutral, positive and negative charged fragment distributions of PS and PET models with 0.82 eV energy control were obtained as (93.5, 2.3, and 4.3%), and (87.8, 5.3, and 6.9%) to the total fragments, respectively. The ratios seem to correspond well to the values observed experimentally in SIMS. Crown Copyright © 2008

Dynamic and static behaviors of CH4 and CO2 in small and large cavities of hydrate

We investigated the static structures and dynamic behaviors for guest molecules (CH4 and CO2) in small and large cavities which are composed of 20 and 24 water molecules, respectively, by B3LYP/6-311++G(d,p) level calculations in GAUSSIAN 09, and using quantum molecular dynamics (QMD) (NVT MD with semiempirical MO PM3 method). For the static calculations, the guest CO2 and CH4 molecules are around at the center of small and large cavities with weak H-bond formations of HOH⋯O 2C and H2O⋯H4C van der Waals interaction systems. Calculated carbon NMR chemical shifts of the CH4 in the gas-state and in the small and large cavities reflected the C-13 experimental tendency, while the calculated carbon NMR chemical shifts of the CO2 in the three states almost correspond to the experimental value in the gas-state. For QMD calculations, we used a cluster model containing 73 water molecules, and examined dynamic behavior of guest molecules in the shell cluster model of 39 water molecules which own small and large cavities. The dynamic behavior of guest molecules are simulated from the trajectory distribution of molecular center of the mass due to the translational motion, and also analyzed using librational motions of guest molecules in the cavities. © 2012 Elsevier B.V. All rights reserved

XPS Spectral Simulation of Chitosan in Thermal Decomposition Process,

金沢大学大学院自然科学研究科物質情報解

Simulation of SIMS for monomer and dimer of lignin under the assumption of thermal decomposition using QMD method,

金沢大学理工研究域物質化学系The thermal decomposition of the monomer and dimer of lignin has been simulated by a quantum molecular dynamics (DMD) method. In the calculation, we controlled the total energy of the system using Nóse-Hoover thermostats in the total energy range of 0.69-0.95 eV, and the sampling position data with a time step of 0.5 fs were carried out up to 3000 (1.5 ps) or 5000 (2.5 ps) steps in ab initio and semiempirical MO methods, respectively. We obtained the thermally decomposed fragments with positive, neutral and negative charges from SCF MO calculation at each data of the last MD step, and simulated the fragment distribution of the monomer and dimer lignins from the last step in 30-40 runs. Simulated mass numbers of positively and negatively charged fragments for lignin monomer and dimer showed considerably good accordance with the experimental results in TOF-SIMS observed by Saito and co-workers. © 2008 Elsevier B.V. All rights reserved

X-Ray Photoelectron Spectral Analysis for Carbon Allotropes,

金沢大学大学院自然科学研究科物質情報解