Potential of MODIS EVI and surface temperature for directly estimating per-pixel ecosystem C fluxes

We tested the potential of estimating per-pixel gross primary production (GPP) directly from the MODIS enhanced vegetation index (EVI) and respiration directly from MODIS surface temperature (MOD11). Carbon flux data were obtained from 10 eddy covariance tower sites representing a wide range of North American vegetations. The correlation between across-site tower GPP and EVI was comparable (r = 0.77) to that between tower GPP and MOD17-GPP (r = 0.73), suggesting that EVI could be used to provide reasonably accurate direct estimates of GPP on a truly per-pixel basis. There was also a strong relationship (r2 = 0.67) between respiration and surface temperature of dense vegetation, suggesting that estimation of net ecosystem exchange (NEE) may be possible with relatively simple pixel based models, at least for some vegetation types

Linking Remotely Sensed Carbon and Water Use Efficiencies with In Situ Soil Properties

The capacity of terrestrial ecosystems to sequester carbon dioxide (CO2 ) from the atmosphere is expected to be altered by climate change and CO2 fertilization, but this projection is limited by our understanding of how the soil system interacts with plants. Understanding the soil–vegetation interactions is essential to assess the magnitude and response of terrestrial ecosystems to the changing climate. Here, we used soil profile and satellite data to explore the role that soil properties play in regulating water and carbon use by plants. Data obtained for 19 terrestrial ecosystem sites in a warm temperate and humid climate were used to investigate the relationship between remotely sensed data and soil physical and chemical properties. Classification and regression tree results showed that in situ soil carbon isotope (δ 13C), and soil order were significant predictors (r2 = 0.39, mean absolute error (MAE) = 0 of 0.175 gC/KgH2O) of remotely sensed water use efficiency (WUE) based on the Moderate Resolution Imaging Spectroradiometer (MODIS). Soil extractable calcium (Ca), and land cover type were significant predictors of remotely sensed carbon use efficiency (CUE) based on MODIS and Landsat data-(r2 = 0.64–0.78, MAE = 0.04–0.06). We used gross primary productivity (GPP) derived from solar-induced fluorescence (SIF) data, based on the Orbiting Carbon Observatory-2 (OCO-2), to calculate WUE and CUE (referred to as WUESIF and CUESIF, respectively) for our study sites. The regression tree analysis revealed that soil organic matter and soil extractable magnesium (Mg), δ 13C, and soil silt content were the important predictors of both WUESIF (r2 = 0.19, MAE = 0.64 gC/KgH2O) and CUESIF (r2 = 0.45, MAE = 0.1), respectively. Our results revealed the importance of soil extractable Ca, soil carbon (S13C is a facet of soil carbon content), and soil organic matter predicting CUE and WUE. Insights gained from this study highlighted the importance of biotic and abiotic factors regulating plant and soil interactions. These types of data are timely and critical for accurate predictions of how terrestrial ecosystems respond to climate change

Detecting Recent Crop Phenology Dynamics in Corn and Soybean Cropping Systems of Kentucky

Accurate phenological information is essential for monitoring crop development, predicting crop yield, and enhancing resilience to cope with climate change. This study employed a curve-change-based dynamic threshold approach on NDVI (Normalized Differential Vegetation Index) time series to detect the planting and harvesting dates for corn and soybean in Kentucky, a typical climatic transition zone, from 2000 to 2018. We compared satellite-based estimates with ground observations and performed trend analyses of crop phenological stages over the study period to analyze their relationships with climate change and crop yields. Our results showed that corn and soybean planting dates were delayed by 0.01 and 0.07 days/year, respectively. Corn harvesting dates were also delayed at a rate of 0.67 days/year, while advanced soybean harvesting occurred at a rate of 0.05 days/year. The growing season length has increased considerably at a rate of 0.66 days/year for corn and was shortened by 0.12 days/year for soybean. Sensitivity analysis showed that planting dates were more sensitive to the early season temperature, while harvesting dates were significantly correlated with temperature over the entire growing season. In terms of the changing climatic factors, only the increased summer precipitation was statistically related to the delayed corn harvesting dates in Kentucky. Further analysis showed that the increased corn yield was significantly correlated with the delayed harvesting dates (1.37 Bu/acre per day) and extended growing season length (1.67 Bu/acre per day). Our results suggested that seasonal climate change (e.g., summer precipitation) was the main factor influencing crop phenological trends, particularly corn harvesting in Kentucky over the study period. We also highlighted the critical role of changing crop phenology in constraining crop production, which needs further efforts for optimizing crop management practices

On the use of MODIS EVI to assess gross primary productivity of North American ecosystems

[1] Carbon flux models based on light use efficiency (LUE), such as the MOD17 algorithm, have proved difficult to parameterize because of uncertainties in the LUE term, which is usually estimated from meteorological variables available only at large spatial scales. In search of simpler models based entirely on remote‐sensing data, we examined direct relationships between the enhanced vegetation index (EVI) and gross primary productivity (GPP) measured at nine eddy covariance flux tower sites across North America. When data from the winter period of inactive photosynthesis were excluded, the overall relationship between EVI and tower GPP was better than that between MOD17 GPP and tower GPP. However, the EVI/GPP relationships vary between sites. Correlations between EVI and GPP were generally greater for deciduous than for evergreen sites. However, this correlation declined substantially only for sites with the smallest seasonal variation in EVI, suggesting that this relationship can be used for all but the most evergreen sites. Within sites dominated by either evergreen or deciduous species, seasonal variation in EVI was best explained by the severity of summer drought. Our results demonstrate that EVI alone can provide estimates of GPP that are as good as, if not better than, current versions of the MOD17 algorithm for many sites during the active period of photosynthesis. Preliminary data suggest that inclusion of other remote‐sensing products in addition to EVI, such as the MODIS land surface temperature (LST), may result in more robust models of carbon balance based entirely on remote‐sensing data

On the use of MODIS EVI to assess gross primary productivity of North American ecosystems

Sherpa Romeo green journal. Permission to archive final published versionCarbon flux models based on light use efficiency (LUE), such as the MOD17 algorithm, have proved difficult to parameterize because of uncertainties in the LUE term, which is usually estimated from meteorological variables available only at large spatial scales. In search of simpler models based entirely on remote-sensing data, we examined direct relationships between the enhanced vegetation index (EVI) and gross primary productivity (GPP) measured at nine eddy covariance flux tower sites across North America. When data from the winter period of inactive photosynthesis were excluded, the overall relationship between EVI and tower GPP was better than that between MOD17 GPP and tower GPP. However, the EVI/GPP relationships vary between sites. Correlations between EVI and GPP were generally greater for deciduous than for evergreen sites. However, this correlation declined substantially only for sites with the smallest seasonal variation in EVI, suggesting that this relationship can be used for all but the most evergreen sites. Within sites dominated by either evergreen or deciduous species, seasonal variation in EVI was best explained by the severity of summer drought. Our results demonstrate that EVI alone can provide estimates of GPP that are as good as, if not better than, current versions of the MOD17 algorithm for many sites during the active period of photosynthesis. Preliminary data suggest that inclusion of other remote-sensing products in addition to EVI, such as the MODIS land surface temperature (LST), may result in more robust models of carbon balance based entirely on remote-sensing dataYe

Linking Remotely Sensed Carbon and Water Use Efficiencies with In Situ Soil Properties

The capacity of terrestrial ecosystems to sequester carbon dioxide (CO2) from the atmosphere is expected to be altered by climate change and CO2 fertilization, but this projection is limited by our understanding of how the soil system interacts with plants. Understanding the soil–vegetation interactions is essential to assess the magnitude and response of terrestrial ecosystems to the changing climate. Here, we used soil profile and satellite data to explore the role that soil properties play in regulating water and carbon use by plants. Data obtained for 19 terrestrial ecosystem sites in a warm temperate and humid climate were used to investigate the relationship between remotely sensed data and soil physical and chemical properties. Classification and regression tree results showed that in situ soil carbon isotope (δ13C), and soil order were significant predictors (r2 = 0.39, mean absolute error (MAE) = 0 of 0.175 gC/KgH2O) of remotely sensed water use efficiency (WUE) based on the Moderate Resolution Imaging Spectroradiometer (MODIS). Soil extractable calcium (Ca), and land cover type were significant predictors of remotely sensed carbon use efficiency (CUE) based on MODIS and Landsat data-(r2 = 0.64–0.78, MAE = 0.04–0.06). We used gross primary productivity (GPP) derived from solar-induced fluorescence (SIF) data, based on the Orbiting Carbon Observatory-2 (OCO-2), to calculate WUE and CUE (referred to as WUESIF and CUESIF, respectively) for our study sites. The regression tree analysis revealed that soil organic matter and soil extractable magnesium (Mg), δ13C, and soil silt content were the important predictors of both WUESIF (r2 = 0.19, MAE = 0.64 gC/KgH2O) and CUESIF (r2 = 0.45, MAE = 0.1), respectively. Our results revealed the importance of soil extractable Ca, soil carbon (S13C is a facet of soil carbon content), and soil organic matter predicting CUE and WUE. Insights gained from this study highlighted the importance of biotic and abiotic factors regulating plant and soil interactions. These types of data are timely and critical for accurate predictions of how terrestrial ecosystems respond to climate change

Scaling the ISAM Land Surface Model through Parallelization of Inter-component Data Transfer

We present the progression of developments necessary to scale the ISAM landsurface model from single nodes and small clusters with unusually largeper-node memory to much larger systems with more common configurations. These efforts include load balancing, conventional library-based output parallelization to reduce memory load, and parallel-in-time data input. OnHopper, a Cray XE6 machine, the result was strong scaling from 256 cores to 16k coreswith an efficiency of 32.9%. On Edison, a Cray XC30 machine, thecode strong scales from 256 cores to 16k coreswith an efficiency of 51.4%. These large-scale gains, and the associated performance increases at smaller scale, enable greater scientific productivity for the users of ISAM and open the possibilities of increased resolution in time and space and greater physical fidelity for the simulated processes while remaining computationally feasible