313,312 research outputs found
High--Resolution 3D Simulations of Relativistic Jets
We have performed high-resolution 3D simulations of relativistic jets with
beam flow Lorentz factors up to 7, a spatial resolution of 8 cells per beam
radius, and for up to 75 normalized time units to study the morphology and
dynamics of 3D relativistic jets. Our simulations show that the coherent fast
backflows found in axisymmetric models are not present in 3D models. We further
find that when the jet is exposed to non-axisymmetric perturbations, (i) it
does not display the strong perturbations found for 3D classical hydrodynamic
and MHD jets (at least during the period of time covered by our simulations),
and (ii) it does propagate according to the 1D estimate. Small 3D effects in
the relativistic beam give rise to a lumpy distribution of apparent speeds like
that observed in M87. The beam is surrounded by a boundary layer of high
specific internal energy. The properties of this layer are briefly discussed.Comment: 15 pages, 4 figures. Accepted to be publish in the ApJ Letters.
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Triplicity of Quarks and Leptons
Quarks come in three colors and have electric charges in multiples of
one-third. There are also three families of quarks and leptons. Whereas the
first two properties can be understood in terms of unification symmetries such
as SU(5), SO(10), or E_6, why there should only be three families remains a
mystery. I propose how all three properties involving the number three are
connected in a fivefold application of the gauge symmetry SU(3).Comment: 10 pages, including 2 figure
A Bi-Hamiltonian Formulation for Triangular Systems by Perturbations
A bi-Hamiltonian formulation is proposed for triangular systems resulted by
perturbations around solutions, from which infinitely many symmetries and
conserved functionals of triangular systems can be explicitly constructed,
provided that one operator of the Hamiltonian pair is invertible. Through our
formulation, four examples of triangular systems are exhibited, which also show
that bi-Hamiltonian systems in both lower dimensions and higher dimensions are
many and varied. Two of four examples give local 2+1 dimensional bi-Hamiltonian
systems and illustrate that multi-scale perturbations can lead to
higher-dimensional bi-Hamiltonian systems.Comment: 16 pages, to appear in J. Math. Phy
Softly Broken A_4 Symmetry for Nearly Degenerate Neutrino Masses
The leptonic Higgs doublet model of neutrino masses is implemented with an
A_4 discrete symmetry (the even permutation of 4 objects or equivalently the
symmetry of the tetrahedron) which has 4 irreducible representations: 1, 1',
1'', and 3. The resulting spontaneous and soft breaking of A_4 provides a
realistic model of charged-lepton masses as well as a nearly degenerate
neutrino mass matrix. Phenomenological consequences at and below the TeV scale
are discussed.Comment: 11 pages, no figur
Agrobacterium tumefaciens Deploys a Superfamily of Type VI Secretion DNase Effectors as Weapons for Interbacterial Competition In Planta
The type VI secretion system (T6SS) is a widespread molecular weapon deployed by many Proteobacteria to target effectors/toxins into both eukaryotic and prokaryotic cells. We report that Agrobacterium tumefaciens, a soil bacterium that triggers tumorigenesis in plants, produces a family of type VI DNase effectors (Tde) that are distinct from previously known polymorphic toxins and nucleases. Tde exhibits an antibacterial DNase activity that relies on a conserved HxxD motif and can be counteracted by a cognate immunity protein, Tdi. In vitro, A. tumefaciens T6SS could kill Escherichia coli but triggered a lethal counterattack by Pseudomonas aeruginosa upon injection of the Tde toxins. However, in an in planta coinfection assay, A. tumefaciens used Tde effectors to attack both siblings cells and P. aeruginosa to ultimately gain a competitive advantage. Such acquired T6SS-dependent fitness in vivo and conservation of Tde-Tdi couples in bacteria highlights a widespread antibacterial weapon beneficial for niche colonization
A refined invariant subspace method and applications to evolution equations
The invariant subspace method is refined to present more unity and more
diversity of exact solutions to evolution equations. The key idea is to take
subspaces of solutions to linear ordinary differential equations as invariant
subspaces that evolution equations admit. A two-component nonlinear system of
dissipative equations was analyzed to shed light on the resulting theory, and
two concrete examples are given to find invariant subspaces associated with
2nd-order and 3rd-order linear ordinary differential equations and their
corresponding exact solutions with generalized separated variables.Comment: 16 page
Extension of Hereditary Symmetry Operators
Two models of candidates for hereditary symmetry operators are proposed and
thus many nonlinear systems of evolution equations possessing infinitely many
commutative symmetries may be generated. Some concrete structures of hereditary
symmetry operators are carefully analyzed on the base of the resulting general
conditions and several corresponding nonlinear systems are explicitly given out
as illustrative examples.Comment: 13 pages, LaTe
On pairwise distances and median score of three genomes under DCJ
In comparative genomics, the rearrangement distance between two genomes
(equal the minimal number of genome rearrangements required to transform them
into a single genome) is often used for measuring their evolutionary
remoteness. Generalization of this measure to three genomes is known as the
median score (while a resulting genome is called median genome). In contrast to
the rearrangement distance between two genomes which can be computed in linear
time, computing the median score for three genomes is NP-hard. This inspires a
quest for simpler and faster approximations for the median score, the most
natural of which appears to be the halved sum of pairwise distances which in
fact represents a lower bound for the median score.
In this work, we study relationship and interplay of pairwise distances
between three genomes and their median score under the model of
Double-Cut-and-Join (DCJ) rearrangements. Most remarkably we show that while a
rearrangement may change the sum of pairwise distances by at most 2 (and thus
change the lower bound by at most 1), even the most "powerful" rearrangements
in this respect that increase the lower bound by 1 (by moving one genome
farther away from each of the other two genomes), which we call strong, do not
necessarily affect the median score. This observation implies that the two
measures are not as well-correlated as one's intuition may suggest.
We further prove that the median score attains the lower bound exactly on the
triples of genomes that can be obtained from a single genome with strong
rearrangements. While the sum of pairwise distances with the factor 2/3
represents an upper bound for the median score, its tightness remains unclear.
Nonetheless, we show that the difference of the median score and its lower
bound is not bounded by a constant.Comment: Proceedings of the 10-th Annual RECOMB Satellite Workshop on
Comparative Genomics (RECOMB-CG), 2012. (to appear
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