Weeds and Weed Management of Rice in Karnataka State, India

Rice is one of the staple food crops of India, and Karnataka is one of the major rice-producing states. The primary method of rice establishment in Karnataka is transplanting, but farmers are opting to shift to direct-seeding of rice. Weed management is critical for realizing optimal yield of direct-seeded rice (DSR). The objective of this review was to synthesize the published literature on weeds and weed management in rice in Karnataka, identify improved weed-management technologies for delivery to farmers, and suggest research needs. Some 98 weed species are reported to be associated with rice in Karnataka. Weed control to date in Karnataka has mostly been based on herbicides. Hand-weeding was found to be effective in all methods of rice establishment. However, it is time-consuming, tedious, and costly because labor is becoming scarce and unavailable, and labor wages are higher. Several PRE and POST herbicides that were effective in other Asian countries were also found to be effective in managing weeds in rice established by different methods in Karnataka. Bensulfuron plus pretilachlor and pyrazosulfuron in aerobic rice and pendimethalin, thiobencarb, bispyribac-sodium, cyhalofop, fenoxaprop plus chlorimuron plus metsulfuron, and fenoxaprop plus ethoxysulfuron in dry-DSR were found effective in managing weeds. In wet-DSR, butachlor plus safener and pretilachlor plus safener were effective. Thiobencarb, pendimethalin, pretilachlor, azimsulfuron plus metsulfuron, bispyribac-sodium, butachlor, cinosulfuron, oxadiazon, and quinclorac were found promising for weed management in transplanted rice. Integration of herbicides with hand-weeding or intercultivation was found to be effective in rice established by different methods. Options that were found economical in managing weeds varied across the different rice-establishment methods. The need for developing location-specific, sustainable, integrated weed management and extension of available technologies for the farming community in Karnataka is emphasized

Rice Production Systems

Rice is grown in more than 100 countries spread across six continents and in varying agroecological and socioeconomic conditions. Rice production systems were classified over years differently depending on the context. In this chapter, the method of rice establishment is considered as criteria for classifying rice production systems across the globe. An attempt is made here to summarize the information on rice production systems, resources used, crop productivity attained, the challenges encountered, and possible research needs for improving productivity in rice production systems, to meet the future food demands. Based on the major methods of rice establishment of the world, the rice production systems are categorized as (a) transplanted rice (TPR) production systems and (b) direct-seeded rice (DSR) production systems. DSR production systems are further categorized as (i) dry-seeded rice (dry-DSR) production system, (ii) wet-seeded rice (wet-DSR) production system, and (iii) water-seeded rice (water-DSR) production system. The productivity of TPR and DSR was reported to be similar when the best management practices are adopted. As already occurred in the developed world, a shift in adoption toward DSR production systems is occurring in developing world, due to advantages of DSR production systems such as lesser cost of production, increased resource (water, labor, and energy) use efficiency, and income compared to TPR. Lower environmental footprint was found to be another advantage of DSR production systems when they were combined with other conservation agricultural practices. The need for continuous research efforts was stressed for understanding the evolving rice production systems across the globe and to develop practical integrated crop management strategies that improve rice productivity and production effectively, sustainably, and economically with minimal environment footprint

Actinin BioID reveals sarcomere crosstalk with oxidative metabolism through interactions with IGF2BP2.

Actinins are strain-sensing actin cross-linkers that are ubiquitously expressed and harbor mutations in human diseases. We utilize CRISPR, pluripotent stem cells, and BioID to study actinin interactomes in human cardiomyocytes. We identify 324 actinin proximity partners, including those that are dependent on sarcomere assembly. We confirm 19 known interactors and identify a network of RNA-binding proteins, including those with RNA localization functions. In vivo and biochemical interaction studies support that IGF2BP2 localizes electron transport chain transcripts to actinin neighborhoods through interactions between its K homology (KH) domain and actinin\u27s rod domain. We combine alanine scanning mutagenesis and metabolic assays to disrupt and functionally interrogate actinin-IGF2BP2 interactions, which reveal an essential role in metabolic responses to pathological sarcomere activation using a hypertrophic cardiomyopathy model. This study expands our functional knowledge of actinin, uncovers sarcomere interaction partners, and reveals sarcomere crosstalk with IGF2BP2 for metabolic adaptation relevant to human disease

Coupling Optical and Electrical Measurements in Artificial Membranes: Lateral Diffusion of Lipids and Channel Forming Peptides in Planar Bilayers

Planar lipid bilayers (PLB) were prepared by the Montal-Mueller technique in a FRAP system designed to simultaneously measure conductivity across, and lateral diffusion of, the bilayer. In the first stage of the project the FRAP system was used to characterise the lateral dynamics of bilayer lipids with regards to phospholipid composition (headgroup, chain unsaturation etc.), presence of cholesterol and the effect of divalent cations on negatively-charged bilayers. In the second stage of the project, lateral diffusion of two fluorescently-labelled voltage-dependent pore-forming peptides (alamethicin and S4s from Shaker K(+) channel) was determined at rest and in the conducting state. This study demonstrates the feasibility of such experiments with PLBs, amenable to physical constraints, and thus offers new opportunities for systematic studies of structure-function relationships in membrane-associating molecules

The 4 per 1000 initiative.

Soil organic matter is at the nexus of global challenges: food security, climate change adaptation and mitigation, soil security. The 4 per 1000 initiative, launched at the Climate COP21 within the Lima-Paris Action Agenda proposes to increase soil organic carbon (SOC) stocks to simultaneously address all these challenges. It directly addresses three sustainable development goals: SDG2 ?no hunger?, SDG13 ?Climate action?, and SDG15 ?Life on land? and indirectly concerns several others. The initiative targets agricultural soils in priority, which are often the most degraded soils and because of the high expected benefits in terms of soil fertility and hence of productivity. A range of agricultural practices are available that allow to increase SOC stocks while ensuring a resilient, productive and environmentally friendly agriculture, so that a large-scale deployment can be aimed at. Here, we review and discuss the main limits and criticisms addressed to the 4 per 1000 initiative

A Contraction Stress Model of Hypertrophic Cardiomyopathy due to Sarcomere Mutations.

Thick-filament sarcomere mutations are a common cause of hypertrophic cardiomyopathy (HCM), a disorder of heart muscle thickening associated with sudden cardiac death and heart failure, with unclear mechanisms. We engineered four isogenic induced pluripotent stem cell (iPSC) models of β-myosin heavy chain and myosin-binding protein C3 mutations, and studied iPSC-derived cardiomyocytes in cardiac microtissue assays that resemble cardiac architecture and biomechanics. All HCM mutations resulted in hypercontractility with prolonged relaxation kinetics in proportion to mutation pathogenicity, but not changes in calcium handling. RNA sequencing and expression studies of HCM models identified p53 activation, oxidative stress, and cytotoxicity induced by metabolic stress that can be reversed by p53 genetic ablation. Our findings implicate hypercontractility as a direct consequence of thick-filament mutations, irrespective of mutation localization, and the p53 pathway as a molecular marker of contraction stress and candidate therapeutic target for HCM patients

Fluorodeoxyglucose and 11C-Choline positron emission tomography for distinction of metastatic plexopathy and neuritis: a case report

INTRODUCTION: Fluorodeoxyglucose positron emission tomography scanning has an established role in the diagnostic work-up of many malignant diseases and also in the evaluation of cancer treatment response. Fluorodeoxyglucose positron emission tomography may, however be non-specific as infectious processes are depicted as well. CASE PRESENTATION: We present a patient with longstanding leg pain and weakness due to plexopathy developed a few years after treatment for prostate cancer. Prostate-specific antigen was raised and magnetic resonance imaging showed contrast uptake in thickened sacral nerves, suspicious for metastasis. While fluorodeoxyglucose positron emission tomography showed increased uptake in the plexus region, (11)C-Choline- positron emission tomography did not show any uptake. It was concluded that the FDG uptake reflected plexus neuritis and no tumor. Treatment for pain relief was started. CONCLUSION: (11)C-Choline- positron emission tomography can be used to detect metastasis in patients with plexopathy suspicious for malignancy, while fluorodeoxyglucose positron emission tomography is more sensitive to inflammatory processes

Biological nitrogen fixation and prospects for ecological intensification in cereal-based cropping systems

The demand for nitrogen (N) for crop production increased rapidly from the middle of the twentieth century and is predicted to at least double by 2050 to satisfy the on-going improvements in productivity of major food crops such as wheat, rice and maize that underpin the staple diet of most of the world's population. The increased demand will need to be fulfilled by the two main sources of N supply – biological nitrogen (gas) (N2) fixation (BNF) and fertilizer N supplied through the Haber-Bosch processes. BNF provides many functional benefits for agroecosystems. It is a vital mechanism for replenishing the reservoirs of soil organic N and improving the availability of soil N to support crop growth while also assisting in efforts to lower negative environmental externalities than fertilizer N. In cereal-based cropping systems, legumes in symbiosis with rhizobia contribute the largest BNF input; however, diazotrophs involved in non-symbiotic associations with plants or present as free-living N2-fixers are ubiquitous and also provide an additional source of fixed N. This review presents the current knowledge of BNF by free-living, non-symbiotic and symbiotic diazotrophs in the global N cycle, examines global and regional estimates of contributions of BNF, and discusses possible strategies to enhance BNF for the prospective benefit of cereal N nutrition. We conclude by considering the challenges of introducing in planta BNF into cereals and reflect on the potential for BNF in both conventional and alternative crop management systems to encourage the ecological intensification of cereal and legume production

Sarcomere function activates a p53-dependent DNA damage response that promotes polyploidization and limits in vivo cell engraftment.

Human cardiac regeneration is limited by low cardiomyocyte replicative rates and progressive polyploidization by unclear mechanisms. To study this process, we engineer a human cardiomyocyte model to track replication and polyploidization using fluorescently tagged cyclin B1 and cardiac troponin T. Using time-lapse imaging, in vitro cardiomyocyte replication patterns recapitulate the progressive mononuclear polyploidization and replicative arrest observed in vivo. Single-cell transcriptomics and chromatin state analyses reveal that polyploidization is preceded by sarcomere assembly, enhanced oxidative metabolism, a DNA damage response, and p53 activation. CRISPR knockout screening reveals p53 as a driver of cell-cycle arrest and polyploidization. Inhibiting sarcomere function, or scavenging ROS, inhibits cell-cycle arrest and polyploidization. Finally, we show that cardiomyocyte engraftment in infarcted rat hearts is enhanced 4-fold by the increased proliferation of troponin-knockout cardiomyocytes. Thus, the sarcomere inhibits cell division through a DNA damage response that can be targeted to improve cardiomyocyte replacement strategies