Versatile reconstruction framework for diffraction tomography with intensity measurements and multiple scattering

International audienceTaking benefit from recent advances in both phase retrieval and estimation of refractive indices from holographic measurements, we propose a unified framework to reconstruct them from intensity-only measurements. Our method relies on a generic and versatile formulation of the inverse problem and includes sparsity constraints. Its modularity enables the use of a variety of forward models, from simple linear ones to more sophisticated nonlinear ones, as well as various regularizers. We present reconstructions that deploy either the beam-propagation method or the iterative Lippmann-Schwinger model, combined with total-variation regularization. They suggest that our proposed (intensity-only) method can reach the same performance as reconstructions from holographic (complex) data. This is of particular interest from a practical point of view because it allows one to simplify the acquisition setup

Imaging Young Stellar Objects with VLTi/PIONIER

OHP 2013: International Colloquium at Haute-Provence Observatory, France, 23-27 September 2013 - Improving the performances of current optical interferometers and future designsThis is the final version of the paper. Available from the publisher via the URL in this record.Optical interferometry imaging is designed to help us to reveal complex astronomical sources without a prior model. Among these complex objects are the young stars and their environments, which have a typical morphology with a point-like source, surrounded by circumstellar material with unknown morphology. To image them, we have developed a numerical method that removes completely the stellar point source and reconstructs the rest of the image, using the differences in the spectral behavior between the star and its circumstellar material. We aim to reveal the first Astronomical Units of these objects where many physical phenomena could interplay: the dust sublimation causing a puffed-up inner rim, a dusty halo, a dusty wind or an inner gaseous component. To investigate more deeply these regions, we carried out the first Large Program survey of HAeBe stars with two main goals: statistics on the geometry of these objects at the first astronomical unit scale and imaging their very close environment. The images reveal the environment, which is not polluted by the star and allows us to derivethe best fit for the flux ratio and the spectral slope. We present the first images from this survey and the application of the imaging method on other astronomical objects.This work is supported by the French ANR POLCA project (Processing of pOLychromatic interferometriC data for Astrophysics, ANR-10-BLAN-0511

The 2012 Interferometric Imaging Beauty Contest

We present the results of the fifth Interferometric Imaging Beauty Contest. The contest consists in blind imaging of test data sets derived from model sources and distributed in the OIFITS format. Two scenarios of imaging with CHARA/MIRC-6T were offered for reconstruction: imaging a T Tauri disc and imaging a spotted red supergiant. There were eight different teams competing this time: Monnier with the software package MACIM; Hofmann, Schertl and Weigelt with IRS; Thi\'ebaut and Soulez with MiRA ; Young with BSMEM; Mary and Vannier with MIROIRS; Millour and Vannier with independent BSMEM and MiRA entries; Rengaswamy with an original method; and Elias with the radio-astronomy package CASA. The contest model images, the data delivered to the contestants and the rules are described as well as the results of the image reconstruction obtained by each method. These results are discussed as well as the strengths and limitations of each algorithm

The 10th VLTI School of Interferometry: Premiering a Fully Online Format

International audienceVery Large Telescope Inerferometer (VLTI) schools have nearly a 20-year history and have trained a significant fraction of today's optical interferometrists who use high-angular-resolution techniques on a regular basis. Very early in the development of the VLTI, training was identified by the community as a necessary tool, as the expertise in optical long-baseline interferometry was limited to a few groups in France and Germany (in those early years the UK was not an ESO member state). The first VLTI school took place in Les Houches, France, in 2002 and since then VLTI schools have been organised in several locations (France, Germany, Hungary, Poland, Portugal) roughly every two years, the previous one being held in 2018 in Lisbon. The VLTI schools are funded and coordinated through the European Interferometry Initiative (Eii)

Cytosolic SYT/SS18 Isoforms Are Actin-Associated Proteins that Function in Matrix-Specific Adhesion

SYT (SYnovial sarcoma Translocated gene or SS18) is widely produced as two isoforms, SYT/L and SYT/S, that are thought to function in the nucleus as transcriptional coactivators. Using isoform-specific antibodies, we detected a sizable pool of SYT isoforms in the cytosol where the proteins were organized into filamentous arrays. Actin and actin-associated proteins co-immunoprecipitated with SYT isoforms, which also co-sedimented and co-localized with the actin cytoskeleton in cultured cells and tissues. The association of SYT with actin bundles was extensive yet stopped short of the distal ends at focal adhesions. Disruption of the actin cytoskeleton also led to a breakdown of the filamentous organization of SYT isoforms in the cytosol. RNAi ablation of SYT/L alone or both isoforms markedly impaired formation of stress fibers and focal adhesions but did not affect formation of cortical actin bundles. Furthermore, ablation of SYT led to markedly impaired adhesion and spreading on fibronectin and laminin-111 but not on collagen types I or IV. These findings indicate that cytoplasmic SYT isoforms interact with actin filaments and function in the ability cells to bind and react to specific extracellular matrices

The Synovial Sarcoma-Associated SYT-SSX2 Oncogene Antagonizes the Polycomb Complex Protein Bmi1

This study demonstrates deregulation of polycomb activity by the synovial sarcoma-associated SYT-SSX2 oncogene, also known as SS18-SSX2. Synovial sarcoma is a soft tissue cancer associated with a recurrent t(X:18) translocation event that generates one of two fusion proteins, SYT-SSX1 or SYT-SSX2. The role of the translocation products in this disease is poorly understood. We present evidence that the SYT-SSX2 fusion protein interacts with the polycomb repressive complex and modulates its gene silencing activity. SYT-SSX2 causes destabilization of the polycomb subunit Bmi1, resulting in impairment of polycomb-associated histone H2A ubiquitination and reactivation of polycomb target genes. Silencing by polycomb complexes plays a vital role in numerous physiological processes. In recent years, numerous reports have implicated gain of polycomb silencing function in several cancers. This study provides evidence that, in the appropriate context, expression of the SYT-SSX2 oncogene leads to loss of polycomb function. It challenges the notion that cancer is solely associated with an increase in polycomb function and suggests that any imbalance in polycomb activity could drive the cell toward oncogenesis. These findings provide a mechanism by which the SYT-SSX2 chimera may contribute to synovial sarcoma pathogenesis

The 2014 interferometric imaging beauty contest

This is the final version of the article. Available from SPIE via the DOI in this record.From Conference Volume 9146: Optical and Infrared Interferometry IV. Jayadev K. Rajagopal; Michelle J. Creech-Eakman; Fabien Malbet. Montréal, Quebec, Canada, June 22, 2014Here we present the results of the 6th biennial optical interferometry imaging beauty contest. Taking advantage of a unique opportunity, the red supergiant VY CMa and the Mira variable R Car were observed in the astronomical H-band with three 4-telescope configurations of the VLTI-AT array using the PIONIER instrument. The community was invited to participate in the subsequent image reconstruction and interpretation phases of the project. Ten groups submitted entries to the beauty contest, and we found reasonable consistency between images obtained from independent workers using quite different algorithms. We also found that significant differences existed between the submitted images, much greater than in past beauty contests that were all based on simulated data. A novel crowd-sourcing" method allowed consensus median images to be constructed, filtering likely artifacts and retaining real features." We definitively detect strong spots on the surfaces of both stars as well as distinct circumstellar shells of emission (likely water/CO) around R Car. In a close contest, Joel Sanchez (IAA-CSIC/Spain) was named the winner of the 2014 interferometric imaging beauty contest. This process has shown that new comers" can use publicly-available imaging software to interpret VLTI/PIONIER imaging data, as long as sufficient observations are taken to have complete uv coverage { a luxury that is often missing. We urge proposers to request adequate observing nights to collect sufficient data for imaging and for time allocation committees to recognise the importance of uv coverage for reliable interpretation of interferometric data. We believe that the result of the proposed broad international project will contribute to inspiring trust in the image reconstruction processes in optical interferometry

Science cases for a visible interferometer

High spatial resolution is the key for the understanding various astrophysical phenomena. But even with the future E-ELT, single dish instruments are limited to a spatial resolution of about 4 mas in the visible. For the closest objects within our Galaxy most of the stellar photosphere remains smaller than 1 mas. With the success of long baseline interferometry these limitations were soom overcome. Today low and high resolution interferometric instruments on the VLTI and CHARA offer an immense range of astrophysical studies. Combining more telescopes and moving to visible wavelengths broadens the science cases even more. With the idea of developing strong science cases for a future visible interferometer, we organized a science group around the following topics: pre-main sequence and main sequence stars, fundamental parameters, asteroseismology and classical pulsating stars, evolved stars, massive stars, active galactic nuclei (AGNs) and imaging techniques. A meeting was organized on the 15th and 16th of January, 2015 in Nice with the support of the Action Specific in Haute Resolution Angulaire (ASHRA), the Programme National en Physique Stellaire (PNPS), the Lagrange Laboratory and the Observatoire de la Cote d'Azur, in order to present these cases and to discuss them further for future visible interferometers. This White Paper presents the outcome of the exchanges. This book is dedicated to the memory of our colleague Olivier Chesneau who passed away at the age of 41

Renal artery stenosis evaluation: diagnostic performance of gadobenate dimeglumine-enhanced MR angiography--comparison with DSA

PURPOSE: To prospectively determine diagnostic performance and safety of contrast material-enhanced (CE) magnetic resonance (MR) angiography with 0.1 mmol per kilogram of body weight gadobenate dimeglumine for depiction of significant steno-occlusive disease (> or =51% stenosis) of renal arteries, with digital subtraction angiography (DSA) as reference standard. MATERIALS AND METHODS: This multicenter study was approved by local institutional review boards; all patients provided written informed consent. Patient enrollment and examination at centers in the United States complied with HIPAA. Two hundred ninety-three patients (154 men, 139 women; mean age, 61.0 years) with severe hypertension (82.2%), progressive renal failure (11.3%), and suspected renal artery stenosis (6.5%) underwent CE MR angiography with three-dimensional spoiled gradient-echo sequences after administration of 0.1 mmol/kg gadobenate dimeglumine at 2 mL/sec. Anteroposterior and oblique DSA was performed in 268 (91.5%) patients. Three independent blinded reviewers evaluated CE MR angiographic images. Sensitivity, specificity, and accuracy of CE MR angiography for detection of significant steno-occlusive disease (> or =51% vessel lumen narrowing) were determined at segment (main renal artery) and patient levels. Positive and negative predictive values and positive and negative likelihood ratios were determined. Interobserver agreement was analyzed with generalized kappa statistics. A safety evaluation (clinical examination, electrocardiogram, blood and urine analysis, monitoring for adverse events) was performed. RESULTS: Of 268 patients, 178 who were evaluated with MR angiography and DSA had significant steno-occlusive disease of renal arteries at DSA. Sensitivity, specificity, and accuracy of CE MR angiography for detection of 51% or greater stenosis or occlusion were 60.1%-84.1%, 89.4%-94.7%, and 80.4%-86.9%, respectively, at segment level. Similar values were obtained for predictive values and for patient-level analyses. Few CE MR angiographic examinations (1.9%-2.8%) were technically inadequate. Interobserver agreement for detection of significant steno-occlusive disease was good (79.9% agreement; kappa = 0.69). No safety concerns were noted. CONCLUSION: CE MR angiography performed with 0.1 mmol/kg gadobenate dimeglumine, compared with DSA, is safe and provides good sensitivity, specificity, and accuracy for detection of significant renal artery steno-occlusive disease