Observations of Rocks in Jezero Landing Site: SuperCam/LIBS technique overview of results from the first six months of operations.

On-board the Perseverance rover, the SuperCam instrument is being used as a remote-sensing facility to analyze rocks and soils targets. SuperCam is a suite of five coaligned techniques: just like ChemCam (onboard MSL/Curiosity rover on Mars since 2012), it uses the Laser Induced Breakdown Spectroscopy (LIBS) technique to determine the elementary composition of the targets, but it also uses Raman (for the first time in planetary science) and visible-infrared (VISIR - for the first time in situ) spectroscopic methods in order to access some mineralogical and structural information. A microphone gives access to some physical parameters of the sampled rocks (such as hardness) as well as to some atmospheric parameters (wind direction). These chemical and mineralogical analyses are contextualized thanks to a color remote micro-imager (RMI). In this study, we focus mainly on the LIBS results obtained so far

Surveillance of Sentinel Node-Positive Melanoma Patients with Reasons for Exclusion from MSLT-II:Multi-Institutional Propensity Score Matched Analysis

BACKGROUND: In sentinel lymph node (SLN)-positive melanoma, two randomized trials demonstrated equivalent melanoma-specific survival with nodal surveillance vs completion lymph node dissection (CLND). Patients with microsatellites, extranodal extension (ENE) in the SLN, or >3 positive SLNs constitute a high-risk group largely excluded from the randomized trials, for whom appropriate management remains unknown. STUDY DESIGN: SLN-positive patients with any of the three high-risk features were identified from an international cohort. CLND patients were matched 1:1 with surveillance patients using propensity scores. Risk of any-site recurrence, SLN-basin-only recurrence, and melanoma-specific mortality were compared. RESULTS: Among 1,154 SLN-positive patients, 166 had ENE, microsatellites, and/or >3 positive SLN. At 18.5 months median follow-up, 49% had recurrence (vs 26% in patients without high-risk features, p 3 positive SLN constitute a high-risk group with a 2-fold greater recurrence risk. For those managed with nodal surveillance, SLN-basin recurrences were more frequent, but all-site recurrence and melanoma-specific mortality were comparable to patients treated with CLND. Most recurrences were outside the SLN-basin, supporting use of nodal surveillance for SLN-positive patients with microsatellites, ENE, and/ or >3 positive SLN

The Supercam Instrument Suite on the NASA Mars 2020 Rover: Body Unit and Combined System Tests

The SuperCam instrument suite provides the Mars 2020 rover, Perseverance, with a number of versatile remote-sensing techniques that can be used at long distance as well as within the robotic-arm workspace. These include laser-induced breakdown spectroscopy (LIBS), remote time-resolved Raman and luminescence spectroscopies, and visible and infrared (VISIR; separately referred to as VIS and IR) reflectance spectroscopy. A remote micro-imager (RMI) provides high-resolution color context imaging, and a microphone can be used as a stand-alone tool for environmental studies or to determine physical properties of rocks and soils from shock waves of laser-produced plasmas. SuperCam is built in three parts: The mast unit (MU), consisting of the laser, telescope, RMI, IR spectrometer, and associated electronics, is described in a companion paper. The on-board calibration targets are described in another companion paper. Here we describe SuperCam’s body unit (BU) and testing of the integrated instrument. The BU, mounted inside the rover body, receives light from the MU via a 5.8 m optical fiber. The light is split into three wavelength bands by a demultiplexer, and is routed via fiber bundles to three optical spectrometers, two of which (UV and violet; 245–340 and 385–465 nm) are crossed Czerny-Turner reflection spectrometers, nearly identical to their counterparts on ChemCam. The third is a high-efficiency transmission spectrometer containing an optical intensifier capable of gating exposures to 100 ns or longer, with variable delay times relative to the laser pulse. This spectrometer covers 535–853 nm (105–7070 cm−1 Raman shift relative to the 532 nm green laser beam) with 12 cm−1 full-width at half-maximum peak resolution in the Raman fingerprint region. The BU electronics boards interface with the rover and control the instrument, returning data to the rover. Thermal systems maintain a warm temperature during cruise to Mars to avoid contamination on the optics, and cool the detectors during operations on Mars. Results obtained with the integrated instrument demonstrate its capabilities for LIBS, for which a library of 332 standards was developed. Examples of Raman and VISIR spectroscopy are shown, demonstrating clear mineral identification with both techniques. Luminescence spectra demonstrate the utility of having both spectral and temporal dimensions. Finally, RMI and microphone tests on the rover demonstrate the capabilities of these subsystems as well

Active surveillance of patients who have sentinel node positive melanoma:An international, multi-institution evaluation of adoption and early outcomes after the Multicenter Selective Lymphadenectomy trial II (MSLT-2)

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/168248/1/cncr33483.pdfhttp://deepblue.lib.umich.edu/bitstream/2027.42/168248/2/cncr33483_am.pd

The association between genetic variants in hMLH1 and hMSH2 and the development of sporadic colorectal cancer in the Danish population

<p>Abstract</p> <p>Background</p> <p>Mutations in the mismatch repair genes <it>hMLH1 </it>and <it>hMSH2 </it>predispose to hereditary non-polyposis colorectal cancer (HNPCC). Genetic screening of more than 350 Danish patients with colorectal cancer (CRC) has led to the identification of several new genetic variants (e.g. missense, silent and non-coding) in <it>hMLH1 </it>and <it>hMSH2</it>. The aim of the present study was to investigate the frequency of these variants in <it>hMLH1 </it>and <it>hMSH2 </it>in Danish patients with sporadic colorectal cancer and in the healthy background population. The purpose was to reveal if any of the common variants lead to increased susceptibility to colorectal cancer.</p> <p>Methods</p> <p>Associations between genetic variants in <it>hMLH1 </it>and <it>hMSH2 </it>and sporadic colorectal cancer were evaluated using a case-cohort design. The genotyping was performed on DNA isolated from blood from the 380 cases with sporadic colorectal cancer and a sub-cohort of 770 individuals. The DNA samples were analyzed using Single Base Extension (SBE) Tag-arrays. A Bonferroni corrected Fisher exact test was used to test for association between the genotypes of each variant and colorectal cancer. Linkage disequilibrium (LD) was investigated using HaploView (v3.31).</p> <p>Results</p> <p>Heterozygous and homozygous changes were detected in 13 of 35 analyzed variants. Two variants showed a borderline association with colorectal cancer, whereas the remaining variants demonstrated no association. Furthermore, the genomic regions covering <it>hMLH1 </it>and <it>hMSH2 </it>displayed high linkage disequilibrium in the Danish population. Twenty-two variants were neither detected in the cases with sporadic colorectal cancer nor in the sub-cohort. Some of these rare variants have been classified either as pathogenic mutations or as neutral variants in other populations and some are unclassified Danish variants.</p> <p>Conclusion</p> <p>None of the variants in <it>hMLH1 </it>and <it>hMSH2 </it>analyzed in the present study were highly associated with colorectal cancer in the Danish population. High linkage disequilibrium in the genomic regions covering <it>hMLH1 </it>and <it>hMSH2</it>, indicate that common genetic variants in the two genes in general are not involved in the development of sporadic colorectal cancer. Nevertheless, some of the rare unclassified variants in <it>hMLH1 </it>and <it>hMSH2 </it>might be involved in the development of colorectal cancer in the families where they were originally identified.</p

The SuperCam Instrument Suite on the Mars 2020 Rover: Science Objectives and Mast-Unit Description

On the NASA 2020 rover mission to Jezero crater, the remote determination of the texture, mineralogy and chemistry of rocks is essential to quickly and thoroughly characterize an area and to optimize the selection of samples for return to Earth. As part of the Perseverance payload, SuperCam is a suite of five techniques that provide critical and complementary observations via Laser-Induced Breakdown Spectroscopy (LIBS), Time-Resolved Raman and Luminescence (TRR/L), visible and near-infrared spectroscopy (VISIR), high-resolution color imaging (RMI), and acoustic recording (MIC). SuperCam operates at remote distances, primarily 2-7 m, while providing data at sub-mm to mm scales. We report on SuperCam's science objectives in the context of the Mars 2020 mission goals and ways the different techniques can address these questions. The instrument is made up of three separate subsystems: the Mast Unit is designed and built in France; the Body Unit is provided by the United States; the calibration target holder is contributed by Spain, and the targets themselves by the entire science team. This publication focuses on the design, development, and tests of the Mast Unit; companion papers describe the other units. The goal of this work is to provide an understanding of the technical choices made, the constraints that were imposed, and ultimately the validated performance of the flight model as it leaves Earth, and it will serve as the foundation for Mars operations and future processing of the data.In France was provided by the Centre National d'Etudes Spatiales (CNES). Human resources were provided in part by the Centre National de la Recherche Scientifique (CNRS) and universities. Funding was provided in the US by NASA's Mars Exploration Program. Some funding of data analyses at Los Alamos National Laboratory (LANL) was provided by laboratory-directed research and development funds

SuperCam Calibration Targets: Design and Development

SuperCam is a highly integrated remote-sensing instrumental suite for NASA’s Mars 2020 mission. It consists of a co-aligned combination of Laser-Induced Breakdown Spectroscopy (LIBS), Time-Resolved Raman and Luminescence (TRR/L), Visible and Infrared Spectroscopy (VISIR), together with sound recording (MIC) and high-magnification imaging techniques (RMI). They provide information on the mineralogy, geochemistry and mineral context around the Perseverance Rover. The calibration of this complex suite is a major challenge. Not only does each technique require its own standards or references, their combination also introduces new requirements to obtain optimal scientific output. Elemental composition, molecular vibrational features, fluorescence, morphology and texture provide a full picture of the sample with spectral information that needs to be co-aligned, correlated, and individually calibrated. The resulting hardware includes different kinds of targets, each one covering different needs of the instrument. Standards for imaging calibration, geological samples for mineral identification and chemometric calculations or spectral references to calibrate and evaluate the health of the instrument, are all included in the SuperCam Calibration Target (SCCT). The system also includes a specifically designed assembly in which the samples are mounted. This hardware allows the targets to survive the harsh environmental conditions of the launch, cruise, landing and operation on Mars during the whole mission. Here we summarize the design, development, integration, verification and functional testing of the SCCT. This work includes some key results obtained to verify the scientific outcome of the SuperCam system

K-Rich Rubbly Bedrock at Glen Torridon, Gale Crater, Mars: Investigating the Possible Presence of Illite

International audienceIntroduction: The Curiosity rover reached the Glen Torridon (GT) area around sol 2300 (January 2019). GT is known to display relatively strong and extensive smectite signatures from orbit [1]. During the last two years of exploring this area, Curiosity has revealed variations in chemical compositions correlated with bedrock facies [2-4]. The spatially dominant type of rock in the lowermost part of GT (which is a lateral continuation of the Jura member) is described as the "rubbly" bedrock because it outcrops as small pieces of bedrock embedded in soil. The rubbly bedrock is composed of finely-laminated mudstones and is characterized by enrichments in K2O and SiO2 [3], whereas the slabs of coherent bedrock adjacent to it are lower in K2O but enriched in MgO [3]. Another mudstone layer with a low MgO/high K2O type of composition is also observed in the overlying Knockfarril Hill member, between Glen Etive and Central Butte. X-ray diffraction (XRD) analyses performed by the CheMin instrument showed that the Jura coherent bedrock contains ~30 wt% of Fe-smectites [5]. However, no XRD analysis was performed on the rubbly bedrock, and the discussion below is thus based solely on elemental compositions measured by ChemCam [6,7]. The objective of this work is to discuss clues regarding the mineralogy of the GT rubbly bedrock: in particular whether the enrichment in K2O is related to partial illitization of the clay minerals, or to a mixing with K-feldspars? Elevated K2O abundances were previously observed in the Kimberley area [8-9], on the floor of Aeolis Palus [10], where CheMin results showed an associated enrichment in K-feldspar (sanidine) [9]. K-feldspars were also observed in igneous rocks such as trachytes [11,12]. In this study, data from the rubbly bedrock of GT are therefore compared to data from Kimberley and from the trachytic igneous rocks observed at Bradbury. Some plagioclase-rich igneous rocks are also used for comparison [12]. Methodology: ChemCam uses the LIBS technique to perform remote chemical analyzes [6,7,12]. The laser beam (300-500 µm, [13]) is large enough that it mostly samples mixtures of mineral phases (as opposed to pure phases), especially in mudstones. Therefore, we used trends in elemental ratios to interpret the mineralogy of the rocks. Compositions with a sum of oxides <90 % were discarded in order to minimize the contribution of the ubiquitous Ca-sulfate veins. Concerning minor elements, peak areas have been used, as described in [11]. Data used to be compared with the GT rubbly bedrock have been filtered in order to have relatively pure phases. For that, data points were plotted in mineralogical plot t

Preliminary Evaluation of the Mars 2020 Rover's SuperCam Development Unit: Co-Aligned Chemical and Mineralogical Analyses

Scheduled to be launched in July/August 2020, the next Mars rover will continue the geological and astrobiological exploration of the martian surface. One of the selected instrument suites on its science payload is called SuperCam. SuperCam will have five science techniques that it will deploy remotely to study the chemistry, mineralogy, and small scale morphology of Mars. These techniques include laser-induced breakdown spectroscopy (LIBS) for chemistry, Raman/time resolved fluorescence (TRF) and visible-near infrared (VISIR) spectroscopy for mineralogy, a microphone to support the LIBS analyses, and a color remote micro imager (RMI) for context imagery and textural analyses [1]