Mass Spectrum and Bounds on the Couplings in Yukawa Models With Mirror-Fermions

The $\rm SU(2)_L\otimes SU(2)_R$ symmetric Yukawa model with mirror-fermions in the limit where the mirror-fermion is decoupled is studied both analytically and numerically. The bare scalar self-coupling $\lambda$ is fixed at zero and infinity. The phase structure is explored and the relevant phase transition is found to be consistent with a second order one. The fermionic mass spectrum close to that transition is discussed and a first non-perturbative estimate of the influence of fermions on the upper and lower bounds on the renormalized scalar self-coupling is given. Numerical results are confronted with perturbative predictions.Comment: 7 (Latex) page

Characteristics of Bose-Einstein condensation in an optical lattice

We discuss several possible experimental signatures of the Bose-Einstein condensation (BEC) transition for an ultracold Bose gas in an inhomogeneous optical lattice. Based on the commonly used time-of-flight imaging technique, we show that the momentum-space density profile in the first Brillouin zone, supplemented by the visibility of interference patterns, provides valuable information about the system. In particular, by crossing the BEC transition temperature, the appearance of a clear bimodal structure sets a qualitative and universal signature of this phase transition. Furthermore, the momentum distribution can also be applied to extract the condensate fraction, which may serve as a promising thermometer in such a system.Comment: 12 pages, 13 figures; Revised version with new figures; Phys. Rev. A 77, 043626 (2008

Signal of Bose condensation in an optical lattice at finite temperature

We discuss the experimental signal for the Bose condensation of cold atoms in an optical lattice at finite temperature. Instead of using the visibility of the interference pattern via the time-of-flight imaging, we show that the momentum space density profile in the first Brillouin zone, in particular its bimodal distribution, provides an unambiguous signal for the Bose condensation. We confirm this point with detailed calculation of the change in the atomic momentum distribution across the condensation phase transition, taking into account both the global trapping potential and the atomic interaction effects.Comment: 4 pages, 2 figures, replaced with the published versio

The Energy Dependence of the Aperiodic Variability for Cygnus X-1, GX 339-4, GRS 1758-258, & 1E 1740.7-2942

Using the data from the Rossi X-ray Timing Explorer (RXTE), we report the different energy dependence of the variability of the four persistent hard X-ray sources in the low-hard state: Cygnus X-1, GX 339-4, GRS 1758-258 and 1E 1740.7-2942. Cygnus X-1 is found to have a flatter power density spectrum (PDS) shape at higher energies. The other three sources have energy independent PDS shapes. The energy dependence of the overall variability (the integrated rms amplitude) varies from source to source and from observation to observation. 1E~1740.7-2942, for example, has a variability generally increasing with energy while GX 339-4 has a decreasing variability. A general trend is found in the four sources that the integrated rms amplitude anti-correlates with the X-ray flux. We compare these distinct energy dependent behaviors with several emission models. None of the models can fully explain all the features that we have found.Comment: 18 pages, 6 figures. Accepted for publication in Ap

A Thermal-Nonthermal Inverse Compton Model for Cyg X-1

Using Monte Carlo methods to simulate the inverse Compton scattering of soft photons, we model the spectrum of the Galactic black hole candidate Cyg X-1, which shows evidence of a nonthermal tail extending beyond a few hundred keV. We assume an ad hoc sphere of leptons, whose energy distribution consists of a Maxwellian plus a high energy power-law tail, and inject 0.5 keV blackbody photons. The spectral data is used to constrain the nonthermal plasma fraction and the power-law index assuming a reasonable Maxwellian temperature and Thomson depth. A small but non-negligible fraction of nonthermal leptons is needed to explain the power-law tail.Comment: 5 pages, 2 PostScript figure, uses aipproc.sty, to appear in Proceedings of Fourth Compton Symposiu

On the critical condition in gravitational shock wave collision and heavy ion collisions

In this paper, we derived a critical condition for matter equilibration in heavy ion collisions using a holographic approach. A gravitational shock waves with infinite transverse extension is used to model infinite nucleus. We constructed the trapped surface in the collision of two asymmetric planar shock waves with sources at different depth in the bulk AdS and formulated a critical condition for matter equilibration in collision of "nucleus" in the dual gauge theory. We found the critical condition is insensitive to the depth of the source closer to the AdS boundary. To understand the origin of the critical condition, we computed the Next to Leading Order stress tensor in the boundary field theory due to the interaction of the nucleus and found the critical condition corresponds to the breaking down of the perturbative expansion. We indeed expect non-perturbative effects be needed to describe black hole formation.Comment: 26 pages, 3 figure

PhyloCSF: a comparative genomics method to distinguish protein-coding and non-coding regions

As high-throughput transcriptome sequencing provides evidence for novel transcripts in many species, there is a renewed need for accurate methods to classify small genomic regions as protein-coding or non-coding. We present PhyloCSF, a novel comparative genomics method that analyzes a multi-species nucleotide sequence alignment to determine whether it is likely to represent a conserved protein-coding region, based on a formal statistical comparison of phylogenetic codon models. We show that PhyloCSF's classification performance in 12-species _Drosophila_ genome alignments exceeds all other methods we compared in a previous study, and we provide a software implementation for use by the community. We anticipate that this method will be widely applicable as the transcriptomes of many additional species, tissues, and subcellular compartments are sequenced, particularly in the context of ENCODE and modENCODE