6 research outputs found
Classification of Distal Growth Plate Ossification States of the Radius Bone Using a Dedicated Ultrasound Device and Machine Learning Techniques for Bone Age Assessments
X-ray imaging, based on ionizing radiation, can be used to determine bone age by examining
distal growth plate fusion in the ulna and radius bones. Legal age determination approaches based
on ultrasound signals exist but are unsuitable to reliably determine bone age. We present a low-cost,
mobile system that uses one-dimensional ultrasound radio frequency signals to obtain a robust
binary classifier enabling the determination of bone age from data of girls and women aged 9 to 24
years. These data were acquired as part of a clinical study conducted with 148 subjects. Our system
detects the presence or absence of the epiphyseal plate by moving ultrasound array transducers
along the forearm, measuring reflection and transmission signals. Even though classical digital signal
processing methods did not achieve a robust classifier, we achieved an F1 score of approximately
87% for binary classification of completed bone growth with machine learning approaches, such as
the gradient boosting machine method CatBoost. We demonstrate that our ultrasound system can
classify the fusion of the distal growth plate of the radius bone and the completion of bone growth
with high accuracy. We propose a non-ionizing alternative to established X-ray imaging methods for
this purpose
Quantification of Volatile Aldehydes Deriving from In Vitro Lipid Peroxidation in the Breath of Ventilated Patients
Exhaled aliphatic aldehydes were proposed as non-invasive biomarkers to detect increased
lipid peroxidation in various diseases. As a prelude to clinical application of the multicapillary
column–ion mobility spectrometry for the evaluation of aldehyde exhalation, we, therefore: (1) identified the most abundant volatile aliphatic aldehydes originating from in vitro oxidation of various
polyunsaturated fatty acids; (2) evaluated emittance of aldehydes from plastic parts of the breathing
circuit; (3) conducted a pilot study for in vivo quantification of exhaled aldehydes in mechanically
ventilated patients. Pentanal, hexanal, heptanal, and nonanal were quantifiable in the headspace of
oxidizing polyunsaturated fatty acids, with pentanal and hexanal predominating. Plastic parts of
the breathing circuit emitted hexanal, octanal, nonanal, and decanal, whereby nonanal and decanal
were ubiquitous and pentanal or heptanal not being detected. Only pentanal was quantifiable in
breath of mechanically ventilated surgical patients with a mean exhaled concentration of 13 ± 5 ppb.
An explorative analysis suggested that pentanal exhalation is associated with mechanical power—a
measure for the invasiveness of mechanical ventilation. In conclusion, exhaled pentanal is a promising non-invasive biomarker for lipid peroxidation inducing pathologies, and should be evaluated in
future clinical studies, particularly for detection of lung injury
On efficient and precise classification of one-dimensional biomedical ultrasonic signals
In one-dimensional (1-D) Ultrasound (US) measurements, signals are
acquired that form the basis of more sophisticated two-dimensional (2-D) or
three-dimensional (3-D) US imaging. These 1-D signals contain a lot of raw
information about the US wave propagation and interaction with the
medium that is only processed in parts during image generation. While
image representations are easy to interpret for humans, the analysis of US
wave signals is hard to perform without applying algorithms to extract
desired features.
This work investigates reliable and fast 1-D US signal classifications to
distinguish between different stages or states in biomedical US scenarios and
shows how the new field of Machine Learning (ML) on raw US wave data
provides advantages and different applications. To achieve good results, the
input signals are treated as time series, which requires the deployment of
comparatively complex Time Series Classification (TSC) algorithms.
The literature shows that a lot of research efforts have previously only
tackled the classification and segmentation of US Brightness mode (B-Mode)
images, while neglecting approaches to classify 1-D signals to a large extent.
This research contributes by developing, deploying and evaluating
classification approaches for three distinct biomedical US classification tasks
and finds that respective signal classifications for different scenarios are
possible with varying degrees of accuracies. It entails the comparison of
several combinations of data types (e.g. temporal, spectral and statistical
features or raw signals), ML models and pre-processing steps to provide a
strong foundation for robust, binary classifications of 1-D US signals for
scenarios based on low-cost wearable, mobile and stationary devices. This
research addresses scientific questions not answered before by informing on
detailed descriptions of beneficial domain specific knowledge (domain specific
knowledge (DSK)), achieved accuracies and times needed for training and
evaluation of the examined ML models.
The resulting ML pipelines includes solutions based on data acquired from
custom experimental setups or clinical trials. Possible real-world applications
might include muscle contraction trackers, muscle fatigue detectors,
epiphyseal radius bone closure detectors or devices providing information
about advanced liver disease stages.
Automated machine-assisted
classifications requiring as little DSK as possible from the end user enable
application scenarios ranging from fitness or rehabilitation trackers as
consumer devices to solutions providing diagnostic support without requiring
extensive knowledge from professional medical practitioners. For example,
decision support systems for bone age assessments in clinical use or liver
health assessment systems for gastroenterologists.
This work shows that reliable, robust and fast classifications based on 1-D
US signals are possible with high degrees of accuracies depending on the
examined scenario with achieved F 1 -scores ranging from ≈ 70% to ≈ 87%.
These results prove that real-life applications for recreational purposes are
already possible and that critical applications for clinical use are highly likely
to be achieved once the presented approaches are further optimized in the future
Classifying Muscle States with One-Dimensional Radio-Frequency Signals from Single Element Ultrasound Transducers
The reliable assessment of muscle states, such as contracted muscles vs. non-contracted muscles or relaxed muscles vs. fatigue muscles, is crucial in many sports and rehabilitation scenarios, such as the assessment of therapeutic measures. The goal of this work was to deploy machine learning (ML) models based on one-dimensional (1-D) sonomyography (SMG) signals to facilitate low-cost and wearable ultrasound devices. One-dimensional SMG is a non-invasive technique using 1-D ultrasound radio-frequency signals to measure muscle states and has the advantage of being able to acquire information from deep soft tissue layers. To mimic real-life scenarios, we did not emphasize the acquisition of particularly distinct signals. The ML models exploited muscle contraction signals of eight volunteers and muscle fatigue signals of 21 volunteers. We evaluated them with different schemes on a variety of data types, such as unprocessed or processed raw signals and found that comparatively simple ML models, such as Support Vector Machines or Logistic Regression, yielded the best performance w.r.t. accuracy and evaluation time. We conclude that our framework for muscle contraction and muscle fatigue classifications is very well-suited to facilitate low-cost and wearable devices based on ML models using 1-D SMG
Classification of Distal Growth Plate Ossification States of the Radius Bone Using a Dedicated Ultrasound Device and Machine Learning Techniques for Bone Age Assessments
X-ray imaging, based on ionizing radiation, can be used to determine bone age by examining distal growth plate fusion in the ulna and radius bones. Legal age determination approaches based on ultrasound signals exist but are unsuitable to reliably determine bone age. We present a low-cost, mobile system that uses one-dimensional ultrasound radio frequency signals to obtain a robust binary classifier enabling the determination of bone age from data of girls and women aged 9 to 24 years. These data were acquired as part of a clinical study conducted with 148 subjects. Our system detects the presence or absence of the epiphyseal plate by moving ultrasound array transducers along the forearm, measuring reflection and transmission signals. Even though classical digital signal processing methods did not achieve a robust classifier, we achieved an F1 score of approximately 87% for binary classification of completed bone growth with machine learning approaches, such as the gradient boosting machine method CatBoost. We demonstrate that our ultrasound system can classify the fusion of the distal growth plate of the radius bone and the completion of bone growth with high accuracy. We propose a non-ionizing alternative to established X-ray imaging methods for this purpose
Quantification of Volatile Aldehydes Deriving from In Vitro Lipid Peroxidation in the Breath of Ventilated Patients
Exhaled aliphatic aldehydes were proposed as non-invasive biomarkers to detect increased lipid peroxidation in various diseases. As a prelude to clinical application of the multicapillary column–ion mobility spectrometry for the evaluation of aldehyde exhalation, we, therefore: (1) identified the most abundant volatile aliphatic aldehydes originating from in vitro oxidation of various polyunsaturated fatty acids; (2) evaluated emittance of aldehydes from plastic parts of the breathing circuit; (3) conducted a pilot study for in vivo quantification of exhaled aldehydes in mechanically ventilated patients. Pentanal, hexanal, heptanal, and nonanal were quantifiable in the headspace of oxidizing polyunsaturated fatty acids, with pentanal and hexanal predominating. Plastic parts of the breathing circuit emitted hexanal, octanal, nonanal, and decanal, whereby nonanal and decanal were ubiquitous and pentanal or heptanal not being detected. Only pentanal was quantifiable in breath of mechanically ventilated surgical patients with a mean exhaled concentration of 13 ± 5 ppb. An explorative analysis suggested that pentanal exhalation is associated with mechanical power—a measure for the invasiveness of mechanical ventilation. In conclusion, exhaled pentanal is a promising non-invasive biomarker for lipid peroxidation inducing pathologies, and should be evaluated in future clinical studies, particularly for detection of lung injury