Simultaneous multi-band detection of Low Surface Brightness galaxies with Markovian modelling

We present an algorithm for the detection of Low Surface Brightness (LSB) galaxies in images, called MARSIAA (MARkovian Software for Image Analysis in Astronomy), which is based on multi-scale Markovian modeling. MARSIAA can be applied simultaneously to different bands. It segments an image into a user-defined number of classes, according to their surface brightness and surroundings - typically, one or two classes contain the LSB structures. We have developed an algorithm, called DetectLSB, which allows the efficient identification of LSB galaxies from among the candidate sources selected by MARSIAA. To assess the robustness of our method, the method was applied to a set of 18 B and I band images (covering 1.3 square degrees in total) of the Virgo cluster. To further assess the completeness of the results of our method, both MARSIAA, SExtractor, and DetectLSB were applied to search for (i) mock Virgo LSB galaxies inserted into a set of deep Next Generation Virgo Survey (NGVS) gri-band subimages and (ii) Virgo LSB galaxies identified by eye in a full set of NGVS square degree gri images. MARSIAA/DetectLSB recovered ~20% more mock LSB galaxies and ~40% more LSB galaxies identified by eye than SExtractor/DetectLSB. With a 90% fraction of false positives from an entirely unsupervised pipeline, a completeness of 90% is reached for sources with r_e > 3" at a mean surface brightness level of mu_g=27.7 mag/arcsec^2 and a central surface brightness of mu^0 g=26.7 mag/arcsec^2. About 10% of the false positives are artifacts, the rest being background galaxies. We have found our method to be complementary to the application of matched filters and an optimized use of SExtractor, and to have the following advantages: it is scale-free, can be applied simultaneously to several bands, and is well adapted for crowded regions on the sky.Comment: 39 pages, 18 figures, accepted for publication in A

Self-Development of Competences for Social Inclusion Using the TENCompetence Infrastructure

This paper describes a pilot study centred on the technology-enhanced self-development of competences in lifelong learning education carried out in the challenging context of the Association of Participants Àgora. The pilot study shows that the use of the TENCompetence infrastructure, i.e. in this case the Personal Development Planner tool, provides various kinds of benefits for adult participants with low educational profiles and who are traditionally excluded from the use of innovative learning technologies and the knowledge society. The selforganized training supported by the PDP tool aims at allowing the learners to create and control their own learning plans based on their interests and educational background including informal and non-formal experiences. In this sense, the pilot participants had the opportunity to develop and improve their competences in English language (basic and advanced levels) and ICT competence profiles which are mostly related to functional and communicative skills. Besides, the use of the PDP functionalities, such as the self-assessment, the planning and the self-regulating elements allowed the participants to develop reflective skills. Pilot results also provide indications for future developments in the field of technology support for self-organized learners. The paper introduces the context and the pilot scenario, indicates the evaluation methodology applied and discusses the most significant findings derived from the pilot study

First report of Quaternary mammals from the Qalehjough area, Lut Desert, Eastern Iran

Taxonomic study of Quaternary mammal remains from the Qalehjough fossil site, eastern Iran, has resulted in the identification of two mammal orders, Artiodactyla and Perissodactyla, with four families and six taxa. Of particular note was the recovery of Stephanorhinus and a caballoid horse. These remains have provided the first opportunity to examine Late Quaternary faunal assemblages in the northern parts of the Lut Desert, eastern Iran. The Qalehjough faunal assemblage documents some zoogeographic characteristics of the eastern Iranian Plateau, and suggests that palaeoenvironments in this part of Iran during the Pleistocene were more humid and wooded than today. The disappearance of rhinoceroses and caballoid horses from this region is most likely a result of climate change and concomitant habitat loss

Exploring morphological generality in the Old World monkey postcranium using an ecomorphological framework

Nearly all primates are ecologically dependent on trees but they are nonetheless found in an enormous range of habitats, from highly xeric environments to dense rainforest. Most primates have a relatively ‘generalised’ skeleton, enabling locomotor flexibility and facilitating other crucial functions, such as manual foraging and grooming. In this paper we explore associations between habitat, locomotion and morphology in the forelimbs of cercopithecids (Old World monkeys), contextualising their skeletal ecomorphological patterns with those of other mammals, and complementing functional morphological analyses with phylogenetic comparative techniques. We investigate the ecomorphological signals present in the generalised primate postcranium, and how an ancestral arboreal ‘bauplan’ might be modified to incorporate terrestriality or exploit distinct arboreal substrates. Analysis of ecomorphological variation in guenons indicates that terrestrial Chlorocebus species retain core elements of a general guenon form, with modifications for terrestriality that vary by species. Adaptation to different modes of arboreality has also occurred in Cercopithecus. The considerable morphological similarity in the guenons sampled emphasises the importance of generality in the primate postcranium – much forelimb variation appears to have emerged stochastically, with a smaller number of traits having a strong functional signal. Analysis of a broader sample of cercopithecids and comparison with felids, suids and bovids indicates that although the cercopithecid humerus has functional morphological signals that enable specimens to be assigned with a reasonable degree of certainty to habitat groups, there is considerable overlap in the specimens assigned to each habitat group. This probably reflects ecological dependence on trees, even in predominantly terrestrial species, as well as the multiple functions of the forelimb and, in some cases, wide geographic distributions that promote intraspecific variation. The use of phylogenetic correction reduced the discriminatory power of the models, indicating that, like allometry, phylogeny contains important ecomorphological information, and should not necessarily be factored out of analyses

Orangutans venture out of the rainforest and into the Anthropocene

Conservation benefits from understanding how adaptability and threat interact to determine a taxon’s vulnerability. Recognizing how interactions with humans have shaped taxa such as the critically endangered orangutan (Pongo spp.) offers insights into this relationship. Orangutans are viewed as icons of wild nature, and most efforts to prevent their extinction have focused on protecting minimally disturbed habitat, with limited success. We synthesize fossil, archeological, genetic, and behavioral evidence to demonstrate that at least 70,000 years of human influence have shaped orangutan distribution, abundance, and ecology and will likely continue to do so in the future. Our findings indicate that orangutans are vulnerable to hunting but appear flexible in response to some other human activities. This highlights the need for a multifaceted, landscape-level approach to orangutan conservation that leverages sound policy and cooperation among government, private sector, and community stakeholders to prevent hunting, mitigate human-orangutan conflict, and preserve and reconnect remaining natural forests. Broad cooperation can be encouraged through incentives and strategies that focus on the common interests and concerns of different stakeholders. Orangutans provide an illustrative example of how acknowledging the long and pervasive influence of humans can improve strategies to preserve biodiversity in the Anthropocene

Species identification of Australian marsupials using collagen fingerprinting

The study of faunal remains from archaeological sites is often complicated by the presence of large numbers of highly fragmented, morphologically unidentifiable bones. In Australia, this is the combined result of harsh preservation conditions and frequent scavenging by marsupial carnivores. The collagen fingerprinting method known as zooarchaeology by mass spectrometry (ZooMS) offers a means to address these challenges and improve identification rates of fragmented bones. Here, we present novel ZooMS peptide markers for 24 extant marsupial and monotreme species that allow for genus-level distinctions between these species. We demonstrate the utility of these new peptide markers by using them to taxonomically identify bone fragments from a nineteenth-century colonial-era pearlshell fishery at Bandicoot Bay, Barrow Island. The suite of peptide biomarkers presented in this study, which focus on a range of ecologically and culturally important species, have the potential to significantly amplify the zooarchaeological and paleontological record of Australia.1. Introduction 2. Material and methods 2.1. Materials 2.1.1. Modern reference specimens 2.1.2. Archaeological specimens 2.2. Collagen extraction 2.3. Matrix-assisted laser desorption/ionization–tandem time of flight mass spectrometry 2.4. Liquid chromatography with tandem mass spectrometry 2.5. Identification and confirmation of biomarkers 3. Results 3.1. Novel ZooMS peptide markers 3.2. Marsupial versus monotreme ZooMS markers 3.3. Marsupial ZooMS markers 3.4. Using ZooMS to identify macropods 3.5. Collagen fingerprinting of archaeological specimens 4. Discussion 4.1. ZooMS insights at Bandicoot Bay 4.2. Comparison to published markers 4.3. Challenges and future prospect

Neolithic dispersal implications of murids from late Holocene archaeological and modern natural deposits in the Talaud Islands, northern Sulawesi

The Sangihe-Talaud Archipelago represents a group of 77 remote islands located between the Philippines and North Sulawesi, in the northern sector of Wallacea. The Talaud Islands have a rich and significant archaeological record going back to the Pleistocene and are instrumental in understanding Pleistocene colonisation of small islands and later models of Austronesian language dispersal. Here we report on vertebrate material excavated from Leang Mande'et, a late Holocene rockshelter on Karakelang, the main island in the Talaud group. The site represents a periodically occupied shelter used for gardening. Fauna recovered predominately comprises murid elements, with at least four taxa (Rattus rattus, Rattus exulans and two Melomys species) found. The rodents show clear signs of being deposited by raptors rather than humans, unlike the small number of fish remains also recovered. DNA sequences from several Rattus rattus specimens are referrable to Rattus rattus complex lineage IV, a lineage with a southern Indochinese origins and broad modern representation through Indonesia and the Philippines. The lack of any Rattus rattus complex lineage II from Leang Mande’et suggests that the first agricultural inhabitants of this island did not come from Taiwan or northern Indochina, but rather that they either originated from the south or that, once established in the Talauds, opened up significant trade networks to the south and in the process acquired a significant pest

A taxonomic and taphonomic study of Pleistocene fossil deposits from the western Nefud Desert, Saudi Arabia

Over the past decade, a growing interest has developed on the archaeology, palaeontology, and palaeoenvironments of the Arabian Peninsula. It is now clear that hominins repeatedly dispersed into Arabia, notably during pluvial interglacial periods when much of the peninsula was characterised by a semiarid grassland environment. During the intervening glacial phases, however, grasslands were replaced with arid and hyperarid deserts. These millennial-scale climatic fluctuations have subjected bones and fossils to a dramatic suite of environmental conditions, affecting their fossilisation and preservation. Yet, as relatively few palaeontological assemblages have been reported from the Pleistocene of Arabia, our understanding of the preservational pathways that skeletal elements can take in these types of environments is lacking. Here, we report the first widespread taxonomic and taphonomic assessment of Arabian fossil deposits. Novel fossil fauna are described and overall the fauna are consistent with a well-watered semiarid grassland environment. Likewise, the taphonomic results suggest that bones were deposited under more humid conditions than present in the region today. However, fossils often exhibit significant attrition, obscuring and fragmenting most finds. These are likely tied to wind abrasion, insolation, and salt weathering following fossilisation and exhumation, processes particularly prevalent in desert environments