MCMC Bayesian Estimation in FIEGARCH Models

Bayesian inference for fractionally integrated exponential generalized autoregressive conditional heteroskedastic (FIEGARCH) models using Markov Chain Monte Carlo (MCMC) methods is described. A simulation study is presented to access the performance of the procedure, under the presence of long-memory in the volatility. Samples from FIEGARCH processes are obtained upon considering the generalized error distribution (GED) for the innovation process. Different values for the tail-thickness parameter \nu are considered covering both scenarios, innovation processes with lighter (\nu2) tails than the Gaussian distribution (\nu=2). A sensitivity analysis is performed by considering different prior density functions and by integrating (or not) the knowledge on the true parameter values to select the hyperparameter values

Symbolic analysis of bursting dynamical regimes of Rulkov neural networks

Neurons modeled by the Rulkov map display a variety of dynamic regimes that include tonic spikes and chaotic bursting. Here we study an ensemble of bursting neurons coupled with the Watts-Strogatz small-world topology. We characterize the sequences of bursts using the symbolic method of time-series analysis known as ordinal analysis, which detects nonlinear temporal correlations. We show that the probabilities of the different symbols distinguish different dynamical regimes, which depend on the coupling strength and the network topology. These regimes have different spatio-temporal properties that can be visualized with raster plots

The Digitized Second Palomar Observatory Sky Survey (DPOSS) II: Photometric Calibration

We present the photometric calibration technique for the Digitized Second Palomar Observatory Sky Survey (DPOSS), used to create seamless catalogs of calibrated objects over large sky areas. After applying a correction for telescope vignetting, the extensive plate overlap regions are used to transform sets of plates onto a common instrumental photometric system. Photometric transformations to the Gunn gri system for each plate, for stars and galaxies, are derived using these contiguous stitched areas and an extensive CCD imaging library obtained for this purpose. We discuss the resulting photometric accuracy, survey depth, and possible systematic errors.Comment: 25 pages, 13 figures. Accepted to AJ. Some figures shrunk or missing to limit file size; the full paper is available at http://www.sdss.jhu.edu/~rrg/science/papers/photometrypaper.ps.g

The type of adjuvant in whole inactivated influenza a virus vaccines impacts vaccine-associated enhanced respiratory disease

Influenza A virus (IAV) causes a disease burden in the swine industry in the US and is a challenge to prevent due to substantial genetic and antigenic diversity of IAV that circulate in pig populations. Whole inactivated virus (WIV) vaccines formulated with oil-in-water (OW) adjuvant are commonly used in swine. However, WIV-OW are associated with vaccine-associated enhanced respiratory disease (VAERD) when the hemagglutinin and neuraminidase of the vaccine strain are mismatched with the challenge virus. Here, we assessed if different types of adjuvant in WIV vaccine formulations impacted VAERD outcome. WIV vaccines with a swine δ1-H1N2 were formulated with different commercial adjuvants: OW1, OW2, nano-emulsion squalene-based (NE) and gel polymer (GP). Pigs were vaccinated twice by the intramuscular route, 3 weeks apart, then challenged with an H1N1pdm09 three weeks post-boost and necropsied at 5 days post infection. All WIV vaccines elicited antibodies detected using the hemagglutination inhibition (HI) assay against the homologous vaccine virus, but not against the heterologous challenge virus; in contrast, all vaccinated groups had cross-reactive IgG antibody and IFN-γ responses against H1N1pdm09, with a higher magnitude observed in OW groups. Both OW groups demonstrated robust homologous HI titers and cross-reactivity against heterologous H1 viruses in the same genetic lineage. However, both OW groups had severe immunopathology consistent with VAERD after challenge when compared to NE, GP, and non-vaccinated challenge controls. None of the WIV formulations protected pigs from heterologous virus replication in the lungs or nasal cavity. Thus, although the type of adjuvant in the WIV formulation played a significant role in the magnitude of immune response to homologous and antigenically similar H1, none tested here increased the breadth of protection against the antigenically-distinct challenge virus, and some impacted immunopathology after challenge

Renormalisation scheme for vector fields on T2 with a diophantine frequency

We construct a rigorous renormalisation scheme for analytic vector fields on the 2-torus of Poincare type. We show that iterating this procedure there is convergence to a limit set with a ``Gauss map'' dynamics on it, related to the continued fraction expansion of the slope of the frequencies. This is valid for diophantine frequency vectors.Comment: final versio

Nambu monopoles interacting with lattice defects in two-dimensional artificial square spin ice

The interactions between an excitation (similar to a pair of Nambu monopoles) and a lattice defect are studied in an artificial two-dimensional square spin ice. This is done by considering a square array of islands containing only one island different from all others. This difference is incorporated in the magnetic moment (spin) of the "imperfect" island and several cases are studied, including the special situation in which this distinct spin is zero (vacancy). We have shown that the two extreme points of a malformed island behave like two opposite magnetic charges. Then, the effective interaction between a pair of Nambu monopoles with the deformed island is a problem involving four magnetic charges (two pairs of opposite poles) and a string. We also sketch the configuration of the field lines of these four charges to confirm this picture. The influence of the string on this interaction decays rapidly with the string distance from the defect.Comment: 7 pages, 13 figure