Nucleotide diversity between alternative haplotypes.

<p>π represents the pair-wise heterozygosity (substitutions/site) between the alternative haplotypes.</p><p>*Regions are referred to by the target gene of interest.</p><p>**Represents aligned sites after excluding simple and low complexity sequence, and sites with low sequence quality.</p

List of 21 behaviorally-relevant genes.

<p>List of 21 behaviorally-relevant genes.</p

Amino acid substitutions in the prairie vole lineage.

<p>The evolutionary relationship of the prairie vole to other rodents and rabbit is illustrated as a phylogenetic tree. Divergence times are represented by the branch lengths of the tree based on <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029345#pone.0029345-Steppan1" target="_blank">[39]</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029345#pone.0029345-Murphy1" target="_blank">[40]</a>. The numbers above the terminal branch leading to the prairie vole represent the number of conservative/radical amino acid substitutions in the behaviorally-relevant proteins that were inferred by parsimony to have occurred in that lineage and unique to the prairie vole. MYA refers to millions of years ago.</p

Summary of BAC sequencing.

<p>*Size of the alternative haplotype assembly is shown in parentheses.</p><p>**Partial sequence.</p><p>***Sequence assembly is adjacent to the target gene and does not include the target gene itself.</p

Supplemental Material for Dumont et al., 2018

Supplemental figures and tables associated with manuscript entitled: Evolutionary association of sex chromosome architecture and meiotic synapsis in North American vole