Nullification Writhe and Chirality of Alternating Links

In this paper, we show how to split the writhe of reduced projections of oriented alternating links into two parts, called nullification writhe, or wx, and remaining writhe, or wy, such that the sum of these quantities equals the writhe w, and each quantity remains an invariant of isotopy. The chirality of oriented alternating links can be detected by a non-zero wx or wy, which constitutes an improvement compared to the detection of chirality by a non-zero w. An interesting corollary is that all oriented alternating links with an even number of components are chiral, a result that also follows from properties of the Conway polynomial.Comment: AMS-LaTeX, 12 pages with 14 figure

Deriving the respiratory sinus arrhythmia from the heartbeat time series using Empirical Mode Decomposition

Heart rate variability (HRV) is a well-known phenomenon whose characteristics are of great clinical relevance in pathophysiologic investigations. In particular, respiration is a powerful modulator of HRV contributing to the oscillations at highest frequency. Like almost all natural phenomena, HRV is the result of many nonlinearly interacting processes; therefore any linear analysis has the potential risk of underestimating, or even missing, a great amount of information content. Recently the technique of Empirical Mode Decomposition (EMD) has been proposed as a new tool for the analysis of nonlinear and nonstationary data. We applied EMD analysis to decompose the heartbeat intervals series, derived from one electrocardiographic (ECG) signal of 13 subjects, into their components in order to identify the modes associated with breathing. After each decomposition the mode showing the highest frequency and the corresponding respiratory signal were Hilbert transformed and the instantaneous phases extracted were then compared. The results obtained indicate a synchronization of order 1:1 between the two series proving the existence of phase and frequency coupling between the component associated with breathing and the respiratory signal itself in all subjects.Comment: 12 pages, 6 figures. Will be published on "Chaos, Solitons and Fractals

Duality, thermodynamics, and the linear programming problem in constraint-based models of metabolism

It is shown that the dual to the linear programming problem that arises in constraint-based models of metabolism can be given a thermodynamic interpretation in which the shadow prices are chemical potential analogues, and the objective is to minimise free energy consumption given a free energy drain corresponding to growth. The interpretation is distinct from conventional non-equilibrium thermodynamics, although it does satisfy a minimum entropy production principle. It can be used to motivate extensions of constraint-based modelling, for example to microbial ecosystems.Comment: 4 pages, 2 figures, 1 table, RevTeX 4, final accepted versio