PlantDet: A benchmark for Plant Detection in the Three-Rivers-Source Region

The Three-River-Source region is a highly significant natural reserve in China that harbors a plethora of untamed botanical resources. To meet the practical requirements of botanical research and intelligent plant management, we construct a large-scale dataset for Plant detection in the Three-River-Source region (PTRS). This dataset comprises 6965 high-resolution images of 2160*3840 pixels, captured by diverse sensors and platforms, and featuring objects of varying shapes and sizes. Subsequently, a team of botanical image interpretation experts annotated these images with 21 commonly occurring object categories. The fully annotated PTRS images contain 122, 300 instances of plant leaves, each labeled by a horizontal rectangle. The PTRS presents us with challenges such as dense occlusion, varying leaf resolutions, and high feature similarity among plants, prompting us to develop a novel object detection network named PlantDet. This network employs a window-based efficient self-attention module (ST block) to generate robust feature representation at multiple scales, improving the detection efficiency for small and densely-occluded objects. Our experimental results validate the efficacy of our proposed plant detection benchmark, with a precision of 88.1%, a mean average precision (mAP) of 77.6%, and a higher recall compared to the baseline. Additionally, our method effectively overcomes the issue of missing small objects. We intend to share our data and code with interested parties to advance further research in this field.Comment: 10 pages, 5 figure

Change of Behavior of \u3cem\u3eBos grunniens\u3c/em\u3e in the Alpine Rangeland in the Eastern Tibetan Plateau

Over 6 million yaks (Bos grunniens) are grazed in the alpine rangelands of the eastern Tibetan Plateau in Qinghai Province, China. Degradation of rangelands has been caused by increased numbers of domestic animals following the rise of the human population. In our previous study in northern and southern sites of Tibetan Plateau in Qinghai Province from 2003 to 2006, behavior of yaks and chemical composition of the faeces (Hasegawa et al. 2006; Hasegawa et al. 2008) and vegetation (Li et al. 2006; Song et al. 2006) were investigated and compared between the two sites, and it was suggested that the material circulation was lower and deterioration of rangeland was greater in the former than in the latter. In this study, behavioral observations of yaks in alpine rangeland of Yushu National Ranch from 2004 to 2012 were carried out to estimate the change of rangeland condition in the southern site of Tibetan Plateau

Delineating Interpersonal Communication Networks: A Study of the Diffusion of an Intervention Among Female Entertainment Workers in Shanghai, China

Diffusion of innovation (DOI) is widely cited in the HIV behavior change literature; however there is a dearth of research on the application of DOI in interventions for sex workers. Following a randomized-controlled trial of HIV risk reduction among female entertainment workers (FEWs) in Shanghai, China, we used qualitative approaches to delineate potential interpersonal communication networks and contributing factors that promote diffusion of information in entertainment venues. Results showed that top-down communication networks from the venue owners to the FEWs were efficient for diffusion of information. Mammies/madams, who act as intermediaries between FEWs and clients form an essential part of FEWs\u27 social networks but do not function as information disseminators due to a conflict of interest between safer sex and maximizing profits. Diffusion of information in large venues tended to rely more on aspects of the physical environment to create intimacy and on pressure from managers to stimulate communication. In small venues, communication and conversations occurred more spontaneously among FEWs. Information about safer sex appeared to be more easily disseminated when the message and the approach used to convey information could be tailored to people working at different levels in the venues. Results suggest that safer sex messages should be provided consistently following an intervention to further promote intervention diffusion, and health-related employer liability systems in entertainment venues should be established, in which employers are responsible for the health of their employees. Our study suggests that existing personal networks can be used to disseminate information in entertainment venues and one should be mindful about the context-specific interactions between FEWs and others in their social networks to better achieve diffusion of interventions

An Ecological Monitoring of the Plateau Pika and Its Impact on Grassland–An Experiment in the Yushu District, Qinghai Province of China

The plateau pika (Ochotona curzoniae; see Fig.1 for photo) is a small mammal that lives in the alpine grasslands of the Tibetan Plateau. There are several uncertainties existing in the ecological behavior of the plateau pika and its impact on the alpine grasslands, and this impact has long been a subject under discussion. The mammal will have created both positive and negative impacts to the plateau environment and the alpine ecology. In China the plateau pika is regarded as a pest and has been a target of control or extermination because it is a competitor with livestock for food.It also putatively destroys fragile high-altitude grasslands and accelerates the spread of deserts. On the other hand, some scientists have believed that the plateau pika is important for alpine grasslands and the ecology, by tilling the soil and also by functioning as a keystone species for biodiversity of the plateau. This paper summarizes a part of the pika’s behavior identified through the experiment conducted during the summer of 2012 in the Qinghai-Tibetan Plateau, China

Relationship between Soil Chemical and Physical Properties and Vegetation in the Latest Decade of Alpine Grasslands of Southern Qinghai, China

The Tibetan Plateau is one of the most important ecosystems in the world (Yang et al. 2009), particularly because of the global importance of its climate (Tian et al. 2008; Wang et al. 2008). Grassland ecosystems on the plateau are sensitive to global change, because the plateau is located in marginal land areas where the growth and distribution of plants depend heavily on local climatic conditions (Zhang et al. 1996). The alpine grassland of Qinghai Province in China has been traditionally used for extensive grazing by sheep and yak (Bos grunniens), but is now degraded from overgrazing. This study investigated the relationship between soil chemical and physical properties and vegetation of alpine grasslands of southern Qinghai, China

The Mechanism of Downregulated Interstitial Fluid Drainage Following Neuronal Excitation.

The drainage of brain interstitial fluid (ISF) has been observed to slow down following neuronal excitation, although the mechanism underlying this phenomenon is yet to be elucidated. In searching for the changes in the brain extracellular space (ECS) induced by electrical pain stimuli in the rat thalamus, significantly decreased effective diffusion coefficient (DECS) and volume fraction (α) of the brain ECS were shown, accompanied by the slowdown of ISF drainage. The morphological basis for structural changes in the brain ECS was local spatial deformation of astrocyte foot processes following neuronal excitation. We further studied aquaporin-4 gene (APQ4) knockout rats in which the changes of the brain ECS structure were reversed and found that the slowed DECS and ISF drainage persisted, confirming that the down-regulation of ISF drainage following neuronal excitation was mainly attributable to the release of neurotransmitters rather than to structural changes of the brain ECS. Meanwhile, the dynamic changes in the DECS were synchronized with the release and elimination processes of neurotransmitters following neuronal excitation. In conclusion, the downregulation of ISF drainage following neuronal excitation was found to be caused by the restricted diffusion in the brain ECS, and DECS mapping may be used to track the neuronal activity in the deep brain

World Data Centre for Microorganisms: an information infrastructure to explore and utilize preserved microbial strains worldwide

The World Data Centre for Microorganisms (WDCM) was established 50 years ago as the data center of the World Federation for Culture Collections (WFCC) Microbial Resource Center (MIRCEN). WDCM aims to provide integrated information services using big data technology for microbial resource centers and microbiologists all over the world. Here, we provide an overview of WDCM including all of its integrated services. Culture Collections Information Worldwide (CCINFO) provides metadata information on 708 culture collections from 72 countries and regions. Global Catalogue of Microorganism (GCM) gathers strain catalogue information and provides a data retrieval, analysis, and visualization system of microbial resources. Currently, GCM includes more than 368,000 strains from 103 culture collections in 43 countries and regions. Analyzer of Bioresource Citation (ABC) is a data mining tool extracting strain related publications, patents, nucleotide sequences and genome information from public data sources to form a knowledge base. Reference Strain Catalogue (RSC) maintains a database of strains listed in International Standards Organization (ISO) and other international or regional standards. RSC allocates a unique identifier to strains recommended for use in diagnosis and quality control, and hence serves as a valuable cross-platform reference. WDCM provides free access to all these services at www.wdcm.org.National High Technology Research and Development Program of China [2014AA021501, 2014AA021503, 2015AA020108]; International S&T Cooperation Program of China (ISTCP) [2015DFG32550]; Bureau of Science & Technology for Development of Chinese Academy of Sciences (Strategic bio-resources information center) and Field Cloud Project of Chinese Academy of Sciences [XXH12503-05-01]. Funding for open access charge: National High Technology Research and Development Program of China [2014AA021501, 2014AA021503, 2015AA020108]; International S&T Cooperation Program of China (ISTCP) [2015DFG32550] ; Bureau of Science & Technology for Development of Chinese Academy of Sciences [Strategic bio-resources information center]; Field Cloud Project of Chinese Academy of Sciences [XXH12503-05-01]

Immune Protection Induced on Day 10 Following Administration of the 2009 A/H1N1 Pandemic Influenza Vaccine

BACKGROUND: The 2009 swine-origin influenza virus (S-OIV) H1N1 pandemic has caused more than 18,000 deaths worldwide. Vaccines against the 2009 A/H1N1 influenza virus are useful for preventing infection and controlling the pandemic. The kinetics of the immune response following vaccination with the 2009 A/H1N1 influenza vaccine need further investigation. METHODOLOGY/PRINCIPAL FINDINGS: 58 volunteers were vaccinated with a 2009 A/H1N1 pandemic influenza monovalent split-virus vaccine (15 µg, single-dose). The sera were collected before Day 0 (pre-vaccination) and on Days 3, 5, 10, 14, 21, 30, 45 and 60 post vaccination. Specific antibody responses induced by the vaccination were analyzed using hemagglutination inhibition (HI) assay and enzyme-linked immunosorbent assay (ELISA). After administration of the 2009 A/H1N1 influenza vaccine, specific and protective antibody response with a major subtype of IgG was sufficiently developed as early as Day 10 (seroprotection rate: 93%). This specific antibody response could maintain for at least 60 days without significant reduction. Antibody response induced by the 2009 A/H1N1 influenza vaccine could not render protection against seasonal H1N1 influenza (seroconversion rate: 3% on Day 21). However, volunteers with higher pre-existing seasonal influenza antibody levels (pre-vaccination HI titer ≥1∶40, Group 1) more easily developed a strong antibody protection effect against the 2009 A/H1N1 influenza vaccine as compared with those showing lower pre-existing seasonal influenza antibody levels (pre-vaccination HI titer <1∶40, Group 2). The titer of the specific antibody against the 2009 A/H1N1 influenza was much higher in Group 1 (geometric mean titer: 146 on Day 21) than that in Group 2 (geometric mean titer: 70 on Day 21). CONCLUSIONS/SIGNIFICANCE: Recipients could gain sufficient protection as early as 10 days after vaccine administration. The protection could last at least 60 days. Individuals with a stronger pre-existing seasonal influenza antibody response may have a relatively higher potential for developing a stronger humoral immune response after vaccination with the 2009 A/H1N1 pandemic influenza vaccine