9 research outputs found
First identification of the pathogen causing tumor malformations in holm oak in Spain
Aim of study: In recent years an increase in pests and diseases associated with truffle plantations has been detected in Spain. The appearance of tumor malformations in trunks and branches of Quercus ilex L. must be highlighted. These bumps have expanded dramatically since the increase in the number and density of truffle plantations. This pathology is not only found in plantations, but also in forests, and in trees of all ages.
Area of study: the eastern mountains and the truffle plantations of the Iberian Peninsula.
Material and methods: Positive results were obtained by using two types of PCR: Real-Time PCR and nested-PCR. They were carried out with primers that amplified 16S ribosomal gene sequences that are common to all known phytoplasmas.
Main result: The disease manifests itself as an irregular thickening in branches of any age and in the trunk that results in the woody tissue cracking open, forming wounds. The affected branches usually undergo necrosis and in case of affecting the trunk, the tree will eventually die. After an extensive literature review and several failed attempts to isolate fungal and bacterial species from these tumors and wounds, the disease-causing organism has been identified as a Candidatus Phytoplasma.
Research highlights: The appearance of this disease may endanger the profitability of an a priori profitable crop. Due to the intrinsic characteristics of the organism, and knowing that no phytosanitary treatment is able to control phytoplasmas, future works should be directed towards identifying the transmitter in order to control the diseasePublishe
Evaluation of detection methods for Virus, Viroids and Phytoplasmas affecting pear and apple
The RT-PCR technique for the detection of apple stem grooving virus (ASGV), apple stem pitting virus (ASPV), apple
chlorotic leaf spot virus (ACLSV), apple mosaic virus (ApMV) and pear blister canker viroid (PBCV) was evaluated
for health control of fruit plants from nurseries. The technique was evaluated in purified RNA and crude extracts and
also in phloem collected in autumn and from young spring shoots. The results obtained for phytoplasma detection with
ribosomal and non-ribosomal primers are also presented
Evaluation of susceptibility of pear and plum varieties and rootstocks to Ca. P. pyri and Ca. P. prunorum using Real-Time PCR
Real-time PCR was used to quantify phytoplasma concentration in fifty inoculated trees from five Prunus rootstocks
and in forty-eight symptomatic pear and Japanese plum trees from orchards. Seasonal fluctuation of Ca. P. prunorum in
different Prunus rootstocks, over three years, showed that the highest percentage detected by nested-PCR was in the
‘Garnem’ rootstock on nearly all sampling dates. Intra-varietal differences were also observed. Phytoplasma titer could
be estimated by real time PCR in some trees of the rootstocks ‘Garnem’, ‘Barrier’, ‘GF-677’ and ‘Marianna’, and
ranged from 4.7x105 to 3.18x109 phytoplasmas per gram of tissue. Quantification by real-time PCR was not possible in
the ‘Cadaman’ trees analyzed, probably due to a lower phytoplasma titer in this variety. Samples from infected trees
from commercial plots had different phytoplasma concentration and detection percentage depending on the variety,
both being lower in ‘Fortune’ and ‘606’ Japanese plum and in ‘Blanquilla’ pear trees
First identification of the pathogen causing tumor malformations in evergreen oaks in Spain
<p><em>Aim of study</em>: In recent years an increase in pests and diseases associated with truffle plantations has been detected in Spain. The appearance of tumor malformations in trunks and branches of <em>Quercus ilex </em>L. must be highlighted. These bumps have expanded dramatically since the increase in the number and density of truffle plantations. This pathology is not only found in plantations, but also in forests, and in trees of all ages.</p><p><em>Area of study: </em>the eastern mountains and the truffle plantations of the Iberian Peninsula.</p><p><em>Material and methods: </em>Positive results were obtained by using two types of PCR: Real-Time PCR and nested-PCR. They were carried out with primers that amplified 16S ribosomal gene sequences that are common to all known phytoplasmas.</p><p><em>Main result</em>: The disease manifests itself as an irregular thickening in branches of any age and in the trunk that results in the woody tissue cracking open, forming wounds. The affected branches usually undergo necrosis and in case of affecting the trunk, the tree will eventually die. After an extensive literature review and several failed attempts to isolate fungal and bacterial species from these tumors and wounds, the disease-causing organism has been identified as a <em>Candidatus </em>Phytoplasma.</p><p><em>Research highlights</em>: The appearance of this disease may endanger the profitability of an <em>a priori </em>profitable crop. Due to the intrinsic characteristics of the organism, and knowing that no phytosanitary treatment is able to control phytoplasmas, future works should be directed towards identifying the transmitter in order to control the disease.</p><p><strong>Key words: </strong><em>Candidatus </em>Phytoplasma; PCR; <em>Quercus ilex</em>; black truffle; <em>Tuber melanosporum</em>.</p
Phytoplasmas infecting pome and stone fruits in South America and Iberian peninsula
The present review focuses on the diseases associated with phytoplasmas that affect pome and stone fruits trees in
Argentina, Bolivia, Chile, Uruguay, Spain and Portugal. The advances and challenges faced by these countries for
these diseases are reported. The economic losses due to the presence of these bacteria seriously affect and reduce
the production and the quality of the fruits.INTA. CIAP. Instituto de Patología VegetalFil: Quiroga, Nicolás. University of Chile. Facultad de Ciencias Agronómicas. Departamento de Sanidad Vegetal. Santiago; ChileFil: Batlle, Assumpció. Institut de Recerca i Tecnologia Agroalimentàries (IRTA). Cabrils, Barcelona; EspañaFil: Laviña, Amparo. Institut de Recerca i Tecnologia Agroalimentàries (IRTA). Cabrils, Barcelona; EspañaFil: Maeso, Diego. Instituto Nacional de Investigación Agropecuaria (INIA). Estación Experimental Las Brujas. Programa Nacional de Producción Frutícola; UruguayFil: Fernández. Franco.Instituto Nacional de Tecnología Agropecuaria (INTA). Centro de Investigaciones Agropecuarias (CIAP). Instituto de Patología Vegetal ( IPAVE); ArgentinaFil: Sousa, Esmeraldina. Instituto Nacional de Investigação Agrária e Veterinária (INIAV). Oeiras, Lisbon; PortugalFil: Fiore, Nicola. University of Chile. Facultad de Ciencias Agronómicas. Departamento de Sanidad Vegetal. Santiago; ChileFil: Conci, Luis. Instituto Nacional de Tecnología Agropecuaria (INTA). Centro de Investigaciones Agropecuarias (CIAP). Instituto de Patología Vegetal ( IPAVE); Argentin
Multilocus sequence analysis reveals the genetic diversity of European fruit tree phytoplasmas and supports the existence of inter-species recombination
The genetic diversity of three temperate fruit tree phytoplasmas ‘Candidatus Phytoplasma
prunorum’, ‘Ca. P. mali’ and ‘Ca. P. pyri’ has been established by multilocus sequence analysis.
Among the four genetic loci used, the genes imp and aceF distinguished 30 and 24 genotypes,
respectively, and showed the highest variability. Percentage of substitution for imp ranged from 50
to 68% according to species. Percentage of substitution varied between 9 and 12% for aceF,
whereas it was between 5 and 6% for pnp and secY. In the case of ‘Ca P. prunorum’ the three
most prevalent aceF genotypes were detected in both plants and insect vectors, confirming that
the prevalent isolates are propagated by insects. The four isolates known to be hypo-virulent had
the same aceF sequence, indicating a possible monophyletic origin. Haplotype network
reconstructed by eBURST revealed that among the 34 haplotypes of ‘Ca. P. prunorum’, the four
hypo-virulent isolates also grouped together in the same clade. Genotyping of some Spanish and
Azerbaijanese ‘Ca. P. pyri’ isolates showed that they shared some alleles with ‘Ca. P. prunorum’,
supporting for the first time to our knowledge, the existence of inter-species recombination
between these two species
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