Terrestrially Derived n-Alkane δD Evidence of Shifting Holocene Paleohydrology in Highland Costa Rica

A previous study of carbon isotopes in the sediments of a glacial lake in Costa Rica led to the hypothesis that changes in the migration of the intertropical convergence zone (ITCZ) over the course of the Holocene significantly affected the hydrology of the surrounding high-elevation páramo ecosystem. This hypothesis was based on millennial-scale changes in terrestrial n-alkane carbon isotope (δ13C) values in a sediment core from Lago de las Morrenas 1, a tarn on the Chirripó massif of the Cordillera de Talamanca. Here we present terrestrial n-alkane hydrogen isotope (δD) data, a more direct proxy of ecosystem drought stress, from the same core. These new data support the previous hypothesis and confirm that the effects of millennial-scale ITCZ dynamics in the circum-Caribbean region were not restricted to tropical lowlands. In southern Central America, these dynamics may have played a fundamental role in millennial-scale fire dynamics in high-elevation páramo ecosystems

Warming-enhanced preferential microbial mineralization of humified boreal forest soil organic matter: Interpretation of soil profiles along a climate transect using laboratory incubations

Accepted for publication in Journal of Geophysical Research. Copyright 2012 American Geophysical Union. Further reproduction or electronic distribution is not permitted.Humified soil organic matter storage in boreal forests is large, and its responses to warming over relatively long timescales is critical for predicting soil feedbacks to climate change. To derive information relevant across decades to centuries from manipulative short-term experiments, we conducted incubations of soils from two forested sites along the Newfoundland-Labrador Boreal Ecosystem Latitude Transect in eastern Canada and assessed linkages between incubation data and these sites' profile characteristics. The sites differ in mean annual temperature by 3.4°C, but vegetation and soil types are similar. Organic soils (Oe + Oa) were incubated for 120 days at 15°C and 20°C, with and without a replaced Oi subhorizon possessing a distinct δ13C signature. Laboratory warming induced significantly greater mineralization and leaching of humified SOM relative to replaced Oi, congruent with greater warming-induced increases in phenol oxidase activity relative to enzymes associated with labile C acquisition (percent increases of 101% versus 50%, respectively). These data suggest that warming can influence microbial communities and their enzymatic dynamics such that relative losses of humified SOM are disproportionately enhanced. This is consistent with stable isotopic, C:N, and radiocarbon profile differences between the two sites, which suggest a greater degree of microbial processing and greater relative losses of older SOC over the preceding decades at the warmer site, given our knowledge of organic inputs in these soils. This study is a first step toward linking the divergent timescales represented by soil profiles and laboratory manipulations, an important goal for biogeochemists assessing climate change impacts on SOM dynamics

Limnología inicial de Laguna Pozo Verde, Costa Rica: Batimetría, agua, sedimentos y diatomeas

Introducción : Costa Rica tiene cientos de lagos, muchos de los cuales nunca han sido estudiados científicamente.  Objetivo: Conocer limnológia  de la Laguna Pozo Verde en el Parque Nacional Juan Castro Blanco, Costa Rica (~1935 m de elevación), para proporcionar datos de referencia para estudiar cambios futuros. Métodos: Medimos la profundidad y temperatura del agua y la profundidad de Secchi; sedimentos superficiales analizados; y examinó mapas e imágenes de satélite. Resultados: Aunque algunos la describen como formada por procesos volcánicos, la Laguna Pozo Verde probablemente se formó en un deslizamiento de tierra, que ocurre con frecuencia en esta zona lluviosa en la empinada ladera sur del inactivo volcán Porvenir. Nuestros sondeos mostraron una profundidad máxima de 9,25 m cerca del centro del lago. El agua era moderadamente transparente (profundidad de Secchi 2,6 m), con pH circunneutro y temperaturas de 15,9 a 18,1 °C, con estratificación débil a 0,5 m. Los sedimentos superficiales contenían 27% de materia orgánica y tenían relaciones C/N y valores de isótopos de carbono estables consistentes con algas lacustres y plantas C 3 ; Surirella angusta compuso más del 90% de las diatomeas. Conclusión: La laguna es significativamente más omera de lo informado y los sedimentos superficiales albergar una combinación de diatomeas única entre los 88 lagos examinados en Costa Rica.Introducción: Costa Rica tiene cientos de lagos, muchos nunca estudiados científicamente. Objetivo: Conocer la limnología de Laguna Pozo Verde en el Parque Nacional Juan Castro Blanco, Costa Rica (~1935m de elevación), como referencia para estudiar futuros cambios. Métodos: Medimos la profundidad y temperatura del agua y la profundidad de Secchi; analizamos sedimentos superficiales; y examinamos mapas e imágenes satelitales. Resultados: Aunque algunos la describen como formada por procesos volcánicos, es probable que Laguna Pozo Verde se haya formado en un deslizamiento de tierra, algo común en esta zona lluviosa de la empinada ladera sur del Volcán Porvenir (inactivo). Hallamos una profundidad máxima de 9,25m cerca del centro. El agua era moderadamente transparente (profundidad de Secchi 2,6m), con un pH cercano a neutro y temperaturas de 15,9-18,1°C, y una débil estratificación a 0,5m. Los sedimentos superficiales contenían un 27% de materia orgánica y tenían cocientes C/N y valores de isótopos de carbono estables, coherentes con algas lacustres y plantas C 3 ; más del 90% de las diatomeas eran Surirella angusta . Conclusión: La laguna es significativamente más somera de lo informado y los sedimentos superficiales albergan una combinación de diatomeas única entre los 88 lagos examinados en Costa Rica

Differential effects of warming and nitrogen fertilization on soil respiration and microbial dynamics in switchgrass croplands

The mechanistic understanding of warming and nitrogen (N) fertilization, alone or in combination, on microbially mediated decomposition is limited. In this study, soil samples were collected from previously harvested switchgrass (Panicum virgatum L.) plots that had been treated with high N fertilizer (HN: 67 kg N ha−1) and those that had received no N fertilizer (NN) over a 3-year period. The samples were incubated for 180 days at 15 °C and 20 °C, during which heterotrophic respiration, δ13C of CO2, microbial biomass (MB), specific soil respiration rate (Rs: respiration per unit of microbial biomass), and exoenzyme activities were quantified at 10 different collections time. Employing switchgrass tissues (referred to as litter) with naturally abundant 13C allowed us to partition CO2 respiration derived from soil and amended litter. Cumulative soil respiration increased significantly by 16.4% and 4.2% under warming and N fertilization, respectively. Respiration derived from soil was elevated significantly with warming, while oxidase, the agent for recalcitrant soil substrate decomposition, was not significantly affected by warming. Warming, however, significantly enhanced MB and Rs indicating a decrease in microbial growth efficiency (MGE). On the contrary, respiration derived from amended litter was elevated with N fertilization, which was consistent with the significantly elevated hydrolase. N fertilization, however, had little effect on MB and Rs, suggesting little change in microbial physiology. Temperature and N fertilization showed minimal interactive effects likely due to little differences in soil N availability between NN and HN samples, which is partly attributable to switchgrass biomass N accumulation (equivalent to ~53% of fertilizer N). Overall, the differential individual effects of warming and N fertilization may be driven by physiological adaptation and stimulated exoenzyme kinetics, respectively. The study shed insights on distinct microbial acquisition of different substrates under global temperature increase and N enrichment

Nitrogen Fertilization Restructured Spatial Patterns of Soil Organic Carbon and Total Nitrogen in Switchgrass and Gamagrass Croplands in Tennessee USA

Nitrogen (N) fertilizers can potentially alter spatial distribution of soil organic carbon (SOC) and total nitrogen (TN) concentrations in croplands such as switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.), but it remains unclear whether these effects are the same between crops and under different rates of fertilization. 13C and 15N are two important proxy measures of soil biogeochemistry, but they were rarely examined as to their spatial distributions in soil. Based on a three-year long fertilization experiment in Middle Tennessee, USA, the top mineral horizon soils (0–15 cm) were collected using a spatially explicit design within two 15-m2 plots under three fertilization treatments in SG and GG croplands. A total of 288 samples were collected based on 12 plots and 24 samples in each plot. The fertilization treatments were no N input (NN), low N input (LN: 84 kg N ha−1 in urea) and high N input (HN: 168 kg N ha−1 in urea). The SOC, TN, SOC/TN (C: N), δ13C and δ15N were quantified and their within-plot variations and spatial distributions were achieved via descriptive and geostatistical methods. Results showed that SG generally displayed 10~120% higher plot-level variations in all variables than GG, and the plot-level variations were 20~77% higher in NN plots than LN and HN plots in SG but they were comparable in unfertilized and fertilized plots in GG. Relative to NN, LN and HN showed more significant surface trends and spatial structures in SOC and TN in both croplands, and the fertilization effect appeared more pronounced in SG. Spatial patterns in C: N, δ13C and δ15N were comparable among different fertilization treatments in both croplands. The descending within-plot variations were also identified among variables (SOC \u3e TN \u3e δ15N \u3e C: N \u3e δ13C). This study demonstrated that N fertilizations generally reduced the plot-level variance and simultaneously re-established spatial structures of SOC and TN in bioenergy croplands, which little varied with fertilization rate but was more responsive in switchgrass cropland

Effects of nitrogen fertilization and bioenergy crop type on topsoil organic carbon and total Nitrogen contents in middle Tennessee USA

Nitrogen (N) fertilization affects bioenergy crop growth and productivity and consequently carbon (C) and N contents in soil, it however remains unclear whether N fertilization and crop type individually or interactively influence soil organic carbon (SOC) and total N (TN). In a three-year long fertilization experiment in switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.) croplands in Middle Tennessee USA, soil samples (0–15cm) were collected in plots with no N input (NN), low N input (LN: 84 kg N ha-1 yr-1 in urea) and high N input (HN: 168 kg N ha-1 yr-1 in urea). Besides SOC and TN, the aboveground plant biomass was also quantified. In addition to a summary of published root morphology data based on a separated mesocosm experiment, the root leachable dissolved organic matter (DOM) of both crops was also measured using archived samples. Results showed no significant interaction of N fertilization and crop type on SOC, TN or plant aboveground biomass (ABG). Relative to NN, HN (not LN) significantly increased SOC and TN in both crops. Though SG showed a 15–68% significantly higher ABG than GG, GG showed a 9.3–12% significantly higher SOC and TN than SG. The positive linear relationships of SOC or TN with ABG were identified for SG. However, GG showed structurally more complex and less readily decomposed root DOM, a larger root volume, total root length and surface area than SG. Collectively, these suggested that intensive N fertilization could increase C and N stocks in bioenergy cropland soils but these effects may be more likely mediated by the aboveground biomass in SG and root chemistry and morphology in GG. Future studies are expected to examine the root characteristics in different bioenergy croplands under the field fertilization experiment

Nanoparticle based surface-enhanced raman spectroscopy

Abstract. Surface-enhanced Raman scattering is a powerful tool for the investigation of biological samples. Following a brief introduction to Raman and surface-enhanced Raman scattering, several examples of biophotonic applications of SERS are discussed. The concept of nanoparticle based sensors using SERS is introduced and the development of these sensors is discussed

Sediment Cores from White Pond, South Carolina, contain a Platinum Anomaly, Pyrogenic Carbon Peak, and Coprophilous Spore Decline at 12.8 ka

A widespread platinum (Pt) anomaly was recently documented in Greenland ice and 11 North American sedimentary sequences at the onset of the Younger Dryas (YD) event (~12,800 cal yr BP), consistent with the YD Impact Hypothesis. We report high-resolution analyses of a 1-meter section of a lake core from White Pond, South Carolina, USA. After developing a Bayesian age-depth model that brackets the late Pleistocene through early Holocene, we analyzed and quantified the following: (1) Pt and palladium (Pd) abundance, (2) geochemistry of 58 elements, (3) coprophilous spores, (4) sedimentary organic matter (OC and sedaDNA), (5) stable isotopes of C (δ13C) and N (δ15N), (6) soot, (7) aciniform carbon, (8) cryptotephra, (9) mercury (Hg), and (10) magnetic susceptibility. We identified large Pt and Pt/Pd anomalies within a 2-cm section dated to the YD onset (12,785 ± 58 cal yr BP). These anomalies precede a decline in coprophilous spores and correlate with an abrupt peak in soot and C/OC ratios, indicative of large-scale regional biomass burning. We also observed a relatively large excursion in δ15N values, indicating rapid climatic and environmental/hydrological changes at the YD onset. Our results are consistent with the YD Impact Hypothesis and impact-related environmental and ecological changes

Introductory programming: a systematic literature review

As computing becomes a mainstream discipline embedded in the school curriculum and acts as an enabler for an increasing range of academic disciplines in higher education, the literature on introductory programming is growing. Although there have been several reviews that focus on specific aspects of introductory programming, there has been no broad overview of the literature exploring recent trends across the breadth of introductory programming. This paper is the report of an ITiCSE working group that conducted a systematic review in order to gain an overview of the introductory programming literature. Partitioning the literature into papers addressing the student, teaching, the curriculum, and assessment, we explore trends, highlight advances in knowledge over the past 15 years, and indicate possible directions for future research