Studies on exploiting semiochemicals for pest management in organic farming systems OF0188

This study addresses the extent to which pest management systems can exploit semiochemicals (defined below) in ways acceptable to organic farming, and determines where the science base needs to be expanded to accommodate specific problems arising in an increasing organic farming sector. It considers whether current knowledge of semiochemical release from particular crop plants, herbs and wild plant species could be investigated further in relation to organic farming practice and identifies how strategies of multiple cropping, that exploit known semiochemical interactions, could be applied to key pest problems in organic production. Where such exploitation is not feasible, other strategies using semiochemicals including traps, extracts of natural products and nature-identical synthetic products are considered. Finally, general and specific directions in which research and development could facilitate greater penetration of the use of semiochemicals in crop protection for organic farming are identified. Semiochemicals are natural products that, by acting as signals, regulate interactions between organisms e.g. plants and insects. Once the semiochemical interactions between a pest and its host plant have been elucidated they can be exploited to regulate the pest population, providing an alternative control strategy to conventional toxicants. The choice of approach by which the semiochemicals are deployed relates to three options, i.e. from a natural plant source, from an extract or as a nature identical synthetic product. However, even where the most natural situations of mixed cropping are used, the scientific basis of the interaction must be established for robustness and sustainability of the approach. A complete understanding of the process allows a risk assessment to be made of any problems that might ensue when exploiting natural systems in different configurations from those encountered naturally. A major approach to using semiochemical based pest control is to exploit ways of repelling pests from crop plants and attracting them towards trap plantations. Deploying semiochemicals generated naturally by plants is consistent with organic farming practice, where a range of mixed cropping techniques are employed already, which ‘unconsciously’ utilise semiochemical effects. Thus, the acceptance and use of systems exploiting aspects of semiochemical deployment demonstrate an emerging role in organic farming practices. However, as emphasised before, a comprehensive knowledge of the semiochemical interactions that underpin these techniques is vital if they are to be exploited fully. Other pest control approaches compatible with organic farming, such as encouragement of beneficial species and the use of reflective surfaces in mulches, may not involve semiochemical effects, but could be exploited more beneficially by integration with semiochemical practices. Semiochemicals generated naturally by plants can be used to influence beneficial organisms as well as invertebrate pests. For example, plant defence chemicals, induced by pest or pathogen infestation, can affect the behaviour of pests and their natural enemies. Semiochemicals can be employed to maximise the impact of parasitic organisms that attack pest populations, for example in the management of refugia for maintaining and increasing populations of these beneficial organisms. In addition, the approach can be applied against other organisms antagonistic to agriculture besides invertebrate pests, for example in weed control, where signals interfering with weed germination can be exploited. Extracts of natural products provide semiochemicals in a form that is familiar and acceptable to organic farming practice, where plant extracts are already used as toxicants or as semiochemical antifeedants and repellents. However, often the scientific basis for use of these materials is limited, and therefore, exploitation is also limited and can be unreliable. By understanding the composition and the mechanism of activity of semiochemicals, natural product extracts can be improved by selection of the best sources of natural materials and appropriate processes of extraction and formulation. Many natural products, particularly pheromones (semiochemicals acting between members of the same species), can be synthesised as nature-identical and the synthetic forms are often indistinguishable from the natural form. Synthesis can be expensive, but where possible, starting materials should be obtained from natural renewable resources. Nature-identical synthetic pheromones are used widely in parts of the world, either deployed in traps for monitoring, mass trapping and lure and kill strategies or for direct pest control approaches such as mating disruption. In addition, manipulation of beneficial species with pheromones is being investigated and synthetic food-related attractants and oviposition attractants have also been developed for pests where pheromones are not available. Already some nature-identical synthetic semiochemicals have been accepted as compatible with organic farming practice. The registration of many sex and aggregation pheromones has been possible because they are nature-identical and are deployed away from the crop or on crop areas that are not consumed. In most cases, semiochemicals, deployed alone, are not sufficiently robust to control pest populations directly. They are most effective when incorporated into strategies, such as the ‘push-pull’ strategy, that are integrated with other forms of pest control, e.g. pathogens, parasitoids and predators, mechanical barriers and resistant plant varieties. The integration of semiochemical approaches with other methods of pest population reduction will help prevent the development of pest resistance to the overall strategy. Since the integrated strategy comprises a number of components that affect different aspects of pest behaviour and development each component can be relatively ineffective when compared to conventional pesticides. However, this has the advantage of not selecting efficiently for resistance to any component of the strategy and thus contributes to the sustainability of the approach. Recommendations 1) Develop a priority list of specific and general problems in organic production to be targeted by semiochemical methodologies in addition to known problems such as in carrot and lettuce production, aphids on a range of vegetable crops and for fruit pests. 2) Develop semiochemical based control methods suitable for 1) and for the targets already known. 3) Provide scientific input, where lacking, for 1 and 2. 4) Encourage greater diversification in organic cropping systems, including agroforestry, so as to exploit current knowledge of semiochemical based control and to pave the way for new interventions as the science develops. 5) Consider semiochemical attributes of non-crop plant inputs including mulches, weeds and multifunctional beneficial plants and the roles that they might play in organic systems. 6) Initiate organic plant breeding programmes, specifically to exploit natural semiochemical release where understood, for crop and companion plants

Lymphocyte subsets and the role of Th1/Th2 balance in stressed chronic pain patients

Background: The complex regional pain syndrome (CRPS) and fibromyalgia (FM) are chronic pain syndromes occurring in highly stressed individuals. Despite the known connection between the nervous system and immune cells, information on distribution of lymphocyte subsets under stress and pain conditions is limited. Methods: We performed a comparative study in 15 patients with CRPS type I, 22 patients with FM and 37 age- and sex-matched healthy controls and investigated the influence of pain and stress on lymphocyte number, subpopulations and the Th1/Th2 cytokine ratio in T lymphocytes. Results: Lymphocyte numbers did not differ between groups. Quantitative analyses of lymphocyte subpopulations showed a significant reduction of cytotoxic CD8+ lymphocytes in both CRPS (p < 0.01) and FM (p < 0.05) patients as compared with healthy controls. Additionally, CRPS patients were characterized by a lower percentage of IL-2-producing T cell subpopulations reflecting a diminished Th1 response in contrast to no changes in the Th2 cytokine profile. Conclusions: Future studies are warranted to answer whether such immunological changes play a pathogenetic role in CRPS and FM or merely reflect the consequences of a pain-induced neurohumoral stress response, and whether they contribute to immunosuppression in stressed chronic pain patients. Copyright (c) 2008 S. Karger AG, Basel

Ribosomal oxygenases are structurally conserved from prokaryotes to humans

2-Oxoglutarate (2OG)-dependent oxygenases have important roles in the regulation of gene expression via demethylation of N-methylated chromatin components1,2 and in the hydroxylation of transcription factors3 and splicing factor proteins4. Recently, 2OG-dependent oxygenases that catalyse hydroxylation of transfer RNA5,6,7 and ribosomal proteins8 have been shown to be important in translation relating to cellular growth, TH17-cell differentiation and translational accuracy9,10,11,12. The finding that ribosomal oxygenases (ROXs) occur in organisms ranging from prokaryotes to humans8 raises questions as to their structural and evolutionary relationships. In Escherichia coli, YcfD catalyses arginine hydroxylation in the ribosomal protein L16; in humans, MYC-induced nuclear antigen (MINA53; also known as MINA) and nucleolar protein 66 (NO66) catalyse histidine hydroxylation in the ribosomal proteins RPL27A and RPL8, respectively. The functional assignments of ROXs open therapeutic possibilities via either ROX inhibition or targeting of differentially modified ribosomes. Despite differences in the residue and protein selectivities of prokaryotic and eukaryotic ROXs, comparison of the crystal structures of E. coli YcfD and Rhodothermus marinus YcfD with those of human MINA53 and NO66 reveals highly conserved folds and novel dimerization modes defining a new structural subfamily of 2OG-dependent oxygenases. ROX structures with and without their substrates support their functional assignments as hydroxylases but not demethylases, and reveal how the subfamily has evolved to catalyse the hydroxylation of different residue side chains of ribosomal proteins. Comparison of ROX crystal structures with those of other JmjC-domain-containing hydroxylases, including the hypoxia-inducible factor asparaginyl hydroxylase FIH and histone Nε-methyl lysine demethylases, identifies branch points in 2OG-dependent oxygenase evolution and distinguishes between JmjC-containing hydroxylases and demethylases catalysing modifications of translational and transcriptional machinery. The structures reveal that new protein hydroxylation activities can evolve by changing the coordination position from which the iron-bound substrate-oxidizing species reacts. This coordination flexibility has probably contributed to the evolution of the wide range of reactions catalysed by oxygenases

Validity of the Common Cold Questionnaire (CCQ) in Asthma Exacerbations

Background: The common cold questionnaire (CCQ) is used to discriminate those with and without a viral infection. Its usefulness in people with acute asthma is unknown. Our aim was to asess the ability of the CCQ to detect viral infection and to monitor recovery during a viral induced asthma exacerbation and confirmed by virological testing. Methodology/Principal Findings: We studied subjects (≥7 yrs) admitted to hospital with acute asthma and diagnosed as positive (n=63), or negative to viral infection (n=27) according to molecular and virological testing from respiratory samples. CCQ asthma history and asthma control questionaire were completed and repeated 4-6 weeks later. Sensitivity specificity, and response to change of the CCQ were assessed by receiver operator curve (ROC) analysis and effect size calculation respectively. The CCQ did not discriminate between viral and non-viral infection for subjects with asthma (sensitivity = 76.2%; specificity = 29.6%). ROC analysis could not differentiate between positive or negative virus in subjects with asthma. The CCQ had a large responce to change following recovery (effect size = 1.01). 39% of subjects recovering from viral exacerbation remained positive to virological testing at follow-up despite improvement in clinical symptoms. The CCQ reflected clinical improvement in these subjects, thus providing additional information to complement virological testing. Conclusions/Significance: The CCQ is a useful instrument for monitorong response to viral infection in people with asthma. Reliable differentiation between viral and non-viral asthma exacerbations was not achieved with the CCQ and requires specific virological testing. When combined with virological testing, the CCQ should be a useful outcome measure for evaluating therapies in viral-induced asthma

Alteration of EGFR Spatiotemporal Dynamics Suppresses Signal Transduction

The epidermal growth factor receptor (EGFR), which regulates cell growth and survival, is integral to colon tumorigenesis. Lipid rafts play a role in regulating EGFR signaling, and docosahexaenoic acid (DHA) is known to perturb membrane domain organization through changes in lipid rafts. Therefore, we investigated the mechanistic link between EGFR function and DHA. Membrane incorporation of DHA into immortalized colonocytes altered the lateral organization of EGFR. DHA additionally increased EGFR phosphorylation but paradoxically suppressed downstream signaling. Assessment of the EGFR-Ras-ERK1/2 signaling cascade identified Ras GTP binding as the locus of the DHA-induced disruption of signal transduction. DHA also antagonized EGFR signaling capacity by increasing receptor internalization and degradation. DHA suppressed cell proliferation in an EGFR-dependent manner, but cell proliferation could be partially rescued by expression of constitutively active Ras. Feeding chronically-inflamed, carcinogen-injected C57BL/6 mice a fish oil containing diet enriched in DHA recapitulated the effects on the EGFR signaling axis observed in cell culture and additionally suppressed tumor formation. We conclude that DHA-induced alteration in both the lateral and subcellular localization of EGFR culminates in the suppression of EGFR downstream signal transduction, which has implications for the molecular basis of colon cancer prevention by DHA

Observation of associated near-side and away-side long-range correlations in √sNN=5.02 TeV proton-lead collisions with the ATLAS detector

Two-particle correlations in relative azimuthal angle (Δϕ) and pseudorapidity (Δη) are measured in √sNN=5.02  TeV p+Pb collisions using the ATLAS detector at the LHC. The measurements are performed using approximately 1  μb-1 of data as a function of transverse momentum (pT) and the transverse energy (ΣETPb) summed over 3.1<η<4.9 in the direction of the Pb beam. The correlation function, constructed from charged particles, exhibits a long-range (2<|Δη|<5) “near-side” (Δϕ∼0) correlation that grows rapidly with increasing ΣETPb. A long-range “away-side” (Δϕ∼π) correlation, obtained by subtracting the expected contributions from recoiling dijets and other sources estimated using events with small ΣETPb, is found to match the near-side correlation in magnitude, shape (in Δη and Δϕ) and ΣETPb dependence. The resultant Δϕ correlation is approximately symmetric about π/2, and is consistent with a dominant cos⁡2Δϕ modulation for all ΣETPb ranges and particle pT

Inhibition of Dengue Virus Entry and Multiplication into Monocytes Using RNA Interference

Prevention and treatment of dengue infection remain a serious global public health priority. Extensive efforts are required toward the development of vaccines and discovery of potential therapeutic compounds against the dengue viruses. Dengue virus entry is a critical step for virus reproduction and establishes the infection. Hence, the blockade of dengue virus entry into the host cell is an interesting antiviral strategy as it represents a barrier to suppress the onset of infection. This study was achieved by using RNA interference to silence the cellular receptor, and the clathrin mediated endocytosis that enhances the entry of dengue virus in monocytes. Results showed a marked reduction of infected monocytes by flow cytometry. In addition, both intracellular and extracellular viral RNA load was shown to be reduced in treated monocytes when compared to untreated monocytes. Based on these findings, this study concludes that this therapeutic strategy of blocking the virus replication at the first stage of multiplication might serve as a hopeful drug to mitigate the dengue symptoms, and reduction the disease severity