88 research outputs found
A new look at the Bezold–Brücke hue shift in the peripheral retina
AbstractExperiments were conducted with a bipartite field to better understand the Bezold–Brücke hue shift in the peripheral retina. The first experiment measured hue shift in the fovea and at 1° and 8° along the horizontal meridian of the nasal retina for nominal test wavelengths of 430, 450, 490, 520 and 610 nm. Peripheral measurements were obtained under two adaptation conditions: after 30 min dark adaptation and following a rod-bleach. Results indicated that foveal hue shifts differed from those obtained after a rod-bleach. Data from the rod-bleach and no-bleach conditions in the periphery were similar, indicating that rods could not account for the differences between the foveal data and the rod-bleach peripheral data. Hue shifts obtained for the 520 nm test stimulus, and to a smaller extent other test wavelengths, at 8° nasal retinal eccentricity revealed that the wavelength of the matching stimulus depended upon the lateral position of the matching and test fields, and this effect was greater in the no-bleach condition than the rod-bleach condition. Several factors were investigated in experiments 2 and 3 to explain the results with the 520 nm test field. It appears that differential rod density under the two half fields and the compression of photoreceptors by the optic disk may partially, but not fully, account for the 520 nm effect
Fast Ensemble Smoothing
Smoothing is essential to many oceanographic, meteorological and hydrological
applications. The interval smoothing problem updates all desired states within
a time interval using all available observations. The fixed-lag smoothing
problem updates only a fixed number of states prior to the observation at
current time. The fixed-lag smoothing problem is, in general, thought to be
computationally faster than a fixed-interval smoother, and can be an
appropriate approximation for long interval-smoothing problems. In this paper,
we use an ensemble-based approach to fixed-interval and fixed-lag smoothing,
and synthesize two algorithms. The first algorithm produces a linear time
solution to the interval smoothing problem with a fixed factor, and the second
one produces a fixed-lag solution that is independent of the lag length.
Identical-twin experiments conducted with the Lorenz-95 model show that for lag
lengths approximately equal to the error doubling time, or for long intervals
the proposed methods can provide significant computational savings. These
results suggest that ensemble methods yield both fixed-interval and fixed-lag
smoothing solutions that cost little additional effort over filtering and model
propagation, in the sense that in practical ensemble application the additional
increment is a small fraction of either filtering or model propagation costs.
We also show that fixed-interval smoothing can perform as fast as fixed-lag
smoothing and may be advantageous when memory is not an issue
The Importance of Ile716 toward the Mutagenicity of 8-Oxo-2’-deoxyguanosine with Bacillus Fragment DNA Polymerase
8-oxo-2’-deoxyguanosine (OdG) is a prominent DNA lesion that can direct the incorporation of dCTP or dATP during replication. As the latter reaction can lead to mutation, the ratio of dCTP/dATP incorporation can significantly affect the mutagenic potential of OdG. Previous work with the A-family polymerase BF and seven analogues of OdG identified a major groove amino acid, Ile716, which likely influences the dCTP/dATP incorporation ratio opposite OdG. To further probe the importance of this amino acid, dCTP and dATP incorporations opposite the same seven analogues were tested with two BF mutants, I716M and I716A. Results from these studies support the presence of clashing interactions between Ile716 and the C8-oxygen and C2-amine during dCTP and dATP incorporations, respectively. Crystallographic analysis suggests that residue 716 alters the conformation of the template base prior to insertion into the active site, thereby affecting enzymatic efficiency. These results are also consistent with previous work with A-family polymerases, which indicate they have tight, rigid active sites that are sensitive to template perturbations
The 3D Grazing Collision of Two Black Holes
We present results for two colliding black holes (BHs), with angular
momentum, spin, and unequal mass. For the first time gravitational waveforms
are computed for a grazing collision from a full 3D numerical evolution. The
collision can be followed through the merger to form a single BH, and through
part of the ringdown period of the final BH. The apparent horizon is tracked
and studied, and physical parameters, such as the mass of the final BH, are
computed. The total energy radiated in gravitational waves is shown to be
consistent with the total mass of the spacetime and the final BH mass. The
implication of these simulations for gravitational wave astronomy is discussed.Comment: 4 pages, 7 figures, revte
Deorbit kit demonstration mission
In Low Earth Orbit, it is possible to use the ambient plasma and the geomagnetic field to exchange momentum with the Earth's magnetosphere without using propellant. A device that allows an efficient momentum exchange is the electrodynamic tether (EDT), a long conductor attached to the satellite. EDT technology has been demonstrated in several past missions, being the Plasma Motor Generator mission (NASA 1993) one of the most successful. Nevertheless, it is not until today that reality has imposed a strong need and a concrete use case for developing this technology. In March 2019, the European Commission project Electrodynamic Tether technology for PAssive Consumable-less deorbit Kit (E.T.PACK) started the design of a new generation EDT. After completing the design phase, the consortium manufactured and is currently testing a Deorbit Kit Demonstrator (DKD) breadboard based on EDT technology. The objective of E.T.PACK is to reach Technology Readiness Level equal to 4 by 2022. The DKD is a standalone 24-kg satellite with the objective to demonstrate the performances of the improved EDT solution and validate its ultra-compact deployment system. The DKD is composed of two modules that will separate in orbit extending a 500-m long tape-like tether. The deployed bare-Aluminium tether will capture electrons from the ambient plasma passively and the circuit will be closed with the ionospheric plasma by using an active electron emitter. E.T.PACK tether will take advantage of several novelties with respect to the mission flown in the past that will allow to optimize the system volume and mass. Once successful demonstrated in orbit, the team plans to develop a suite of EDT systems capable of deorbiting satellites between 200 and 1000 kg from an altitude up to 1200 km in a few months. The work presents the current design status of the de-orbit kit demonstrator breadboard, the simulations of the system deorbit performances and the development approach.This work was supported by the European Union's Horizon 2020 Research and Innovation Programme under grant agreement No.828902 (3M€ E.T.PACK project) and No.101034874 (100K€ BMOM project). SG is supported by an Industrial Ph.D funded by Comunidad de Madrid (135K€ IND2019/TIC17198). The team has recently got 2.5M€ additional financial support from European Union (ETPACK-F project No. 101058166) for the manufacturing and qualification of the In Orbit Demonstration (IOD) by the end of 2025
The effects of assimilating a sub-grid-scale sea ice thickness distribution in a new Arctic sea ice data assimilation system
In the past decade groundbreaking new satellite observations of the Arctic sea ice cover have been made, allowing researchers to understand the
state of the Arctic sea ice system in greater detail than before. The derived estimates of sea ice thickness are useful but limited in time and
space. In this study the first results of a new sea ice data assimilation system are presented. Observations assimilated (in various combinations)
are monthly mean sea ice thickness and monthly mean sea ice thickness distribution from CryoSat-2 and NASA daily Bootstrap sea ice
concentration. This system couples the Centre for Polar Observation and Modelling's (CPOM) version of the Los Alamos Sea Ice Model (CICE) to the
localised ensemble transform Kalman filter (LETKF) from the Parallel Data Assimilation Framework (PDAF) library. The impact of assimilating a
sub-grid-scale sea ice thickness distribution is of particular novelty. The sub-grid-scale sea ice thickness distribution is a fundamental component
of sea ice models, playing a vital role in the dynamical and thermodynamical processes, yet very little is known of its true state in the Arctic.
This study finds that assimilating CryoSat-2 products for the mean thickness and the sub-grid-scale thickness distribution can have significant
consequences for the modelled distribution of the ice thickness across the Arctic and particularly in regions of thick multi-year ice. The
assimilation of sea ice concentration, mean sea ice thickness and sub-grid-scale sea ice thickness distribution together performed best when
compared to a subset of CryoSat-2 observations held back for validation. Regional model biases are reduced: the thickness of the thickest ice in the
Canadian Arctic Archipelago (CAA) is decreased, but the thickness of the ice in the central Arctic is increased. When comparing the assimilation of
mean thickness with the assimilation of sub-grid-scale thickness distribution, it is found that the latter leads to a significant change in the
volume of ice in each category. Estimates of the thickest ice improve significantly with the assimilation of sub-grid-scale thickness distribution
alongside mean thickness.</p
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Satellite-supported flood forecasting in river networks: a real case study
Satellite-based (e.g., Synthetic Aperture Radar [SAR]) water level observations (WLOs) of the floodplain can be sequentially assimilated into a hydrodynamic model to decrease forecast uncertainty. This has the potential to keep the forecast on track, so providing an Earth Observation (EO) based flood forecast system. However, the operational applicability of such a system for floods developed over river networks requires further testing. One of the promising techniques for assimilation in this field is the family of ensemble Kalman (EnKF) filters. These filters use a limited-size ensemble representation of the forecast error covariance matrix. This representation tends to develop spurious correlations as the forecast-assimilation cycle proceeds, which is a further complication for dealing with floods in either urban areas or river junctions in rural environments. Here we evaluate the assimilation of WLOs obtained from a sequence of real SAR overpasses (the X-band COSMO-Skymed constellation) in a case study. We show that a direct application of a global Ensemble Transform Kalman Filter (ETKF) suffers from filter divergence caused by spurious correlations. However, a spatially-based filter localization provides a substantial moderation in the development of the forecast error covariance matrix, directly improving the forecast and also making it possible to further benefit from a simultaneous online inflow error estimation and correction. Additionally, we propose and evaluate a novel along-network metric for filter localization, which is physically-meaningful for the flood over a network problem. Using this metric, we further evaluate the simultaneous estimation of channel friction and spatially-variable channel bathymetry, for which the filter seems able to converge simultaneously to sensible values. Results also indicate that friction is a second order effect in flood inundation models applied to gradually varied flow in large rivers. The study is not conclusive regarding whether in an operational situation the simultaneous estimation of friction and bathymetry helps the current forecast. Overall, the results indicate the feasibility of stand-alone EO-based operational flood forecasting
Toward reliable ensemble Kalman filter estimates of CO 2 fluxes
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/95036/1/jgrd18220.pd
The comorbidity and co-medication profile of patients with progressive supranuclear palsy
Background: Progressive supranuclear palsy (PSP) is usually diagnosed in elderly. Currently, little is known about comorbidities and the co-medication in these patients. Objectives: To explore the pattern of comorbidities and co-medication in PSP patients according to the known different phenotypes and in comparison with patients without neurodegenerative disease. Methods: Cross-sectional data of PSP and patients without neurodegenerative diseases (non-ND) were collected from three German multicenter observational studies (DescribePSP, ProPSP and DANCER). The prevalence of comorbidities according to WHO ICD-10 classification and the prevalence of drugs administered according to WHO ATC system were analyzed. Potential drug–drug interactions were evaluated using AiDKlinik®. Results: In total, 335 PSP and 275 non-ND patients were included in this analysis. The prevalence of diseases of the circulatory and the nervous system was higher in PSP at first level of ICD-10. Dorsopathies, diabetes mellitus, other nutritional deficiencies and polyneuropathies were more frequent in PSP at second level of ICD-10. In particular, the summed prevalence of cardiovascular and cerebrovascular diseases was higher in PSP patients. More drugs were administered in the PSP group leading to a greater percentage of patients with polypharmacy. Accordingly, the prevalence of potential drug–drug interactions was higher in PSP patients, especially severe and moderate interactions. Conclusions: PSP patients possess a characteristic profile of comorbidities, particularly diabetes and cardiovascular diseases. The eminent burden of comorbidities and resulting polypharmacy should be carefully considered when treating PSP patients
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