Anomalous Roughening in Experiments of Interfaces in Hele-Shaw Flows with Strong Quenched Disorder

We report experimental evidences of anomalous kinetic roughening in the stable displacement of an oil-air interface in a Hele-Shaw cell with strong quenched disorder. The disorder consists on a random modulation of the gap spacing transverse to the growth direction (tracks). We have performed experiments varying average interface velocity and gap spacing, and measured the scaling exponents. We have obtained beta=0.50, beta*=0.25, alpha=1.0, alpha_l=0.5, and z=2. When there is no fluid injection, the interface is driven solely by capillary forces, and a higher value of beta around beta=0.65 is measured. The presence of multiscaling and the particular morphology of the interfaces, characterized by high slopes that follow a L\'evy distribution, confirms the existence of anomalous scaling. From a detailed study of the motion of the oil--air interface we show that the anomaly is a consequence of different local velocities over tracks plus the coupling in the motion between neighboring tracks. The anomaly disappears at high interface velocities, weak capillary forces, or when the disorder is not sufficiently persistent in the growth direction. We have also observed the absence of scaling when the disorder is very strong or when a regular modulation of the gap spacing is introduced.Comment: 14 pages, 17 figure

Dynamic and functional alterations of neuronal networks in vitro upon physical damage: a proof of concept

There is a growing technological interest in combining biological neuronal networks with electronic ones, specifically for biological computation, human-machine interfacing and robotic implants. A major challenge for the development of these technologies is the resilience of the biological networks to physical damage, for instance, when used in harsh environments. To tackle this question, here, we investigated the dynamic and functional alterations of rodent cortical networks grown in vitro that were physically damaged, either by sequentially removing groups of neurons that were central for information flow or by applying an incision that cut the network in half. In both cases, we observed a remarkable capacity of the neuronal cultures to cope with damage, maintaining their activity and even reestablishing lost communication pathways. We also observed¿particularly for the cultures cut in half¿that a reservoir of healthy neurons surrounding the damaged region could boost resilience by providing stimulation and a communication bridge across disconnected areas. Our results show the remarkable capacity of neuronal cultures to sustain and recover from damage, and may be inspirational for the development of future hybrid biological-electronic systems

Effect of Disorder on Ultrafast Exciton Dynamics Probed by Single Molecule Spectroscopy

We present a single-molecule study unraveling the effect of static disorder on the vibrational-assisted ultrafast exciton dynamics in multichromophoric systems. For every single complex, we probe the initial exciton relaxation process by an ultrafast pump-probe approach and the coupling to vibrational modes by emission spectra, while fluorescence lifetime analysis measures the amount of static disorder. Exploiting the wide range of disorder found from complex to complex, we demonstrate that static disorder accelerates the dephasing and energy relaxation rate of the exciton

Ultra Wideband Impulse Radio Superregenerative Reception

Postprint (published version

Unveiling a Novel Transient Druggable Pocket in BACE-1 through Molecular Simulations: Conformational Analysis and Binding Mode of Multisite Inhibitors

The critical role of BACE-1 in the formation of neurotoxic ß-amyloid peptides in the brain makes it an attractive target for an efficacious treatment of Alzheimer's disease. However, the development of clinically useful BACE-1 inhibitors has proven to be extremely challenging. In this study we examine the binding mode of a novel potent inhibitor (compound 1, with IC50 80 nM) designed by synergistic combination of two fragments - huprine and rhein - that individually are endowed with very low activity against BACE-1. Examination of crystal structures reveals no appropriate binding site large enough to accommodate 1. Therefore we have examined the conformational flexibility of BACE-1 through extended molecular dynamics simulations, paying attention to the highly flexible region shaped by loops 8-14, 154-169 and 307-318. The analysis of the protein dynamics, together with studies of pocket druggability, has allowed us to detect the transient formation of a secondary binding site, which contains Arg307 as a key residue for the interaction with small molecules, at the edge of the catalytic cleft. The formation of this druggable 'floppy' pocket would enable the binding of multisite inhibitors targeting both catalytic and secondary sites. Molecular dynamics simulations of BACE-1 bound to huprine-rhein hybrid compounds support the feasibility of this hypothesis. The results provide a basis to explain the high inhibitory potency of the two enantiomeric forms of 1, together with the large dependence on the length of the oligomethylenic linker. Furthermore, the multisite hypothesis has allowed us to rationalize the inhibitory potency of a series of tacrine-chromene hybrid compounds, specifically regarding the apparent lack of sensitivity of the inhibition constant to the chemical modifications introduced in the chromene unit. Overall, these findings pave the way for the exploration of novel functionalities in the design of optimized BACE-1 multisite inhibitors

Role of Dense Shelf Water Cascading in the Transfer of Organochlorine Compounds to Open Marine Waters

9 pages, 4 figures, 2 tablesSettling particles were collected by an array of sediment trap moorings deployed along the Cap de Creus (CCC) and Lacaze-Duthiers (LDC) submarine canyons and on the adjacent southern open slope (SOS) between October 2005 and October 2006. This array collected particles during common settling processes and particles transferred to deep waters by dense shelf water cascading (DSWC). Polychlorobiphenyls (PCBs), dichlorodiphenyltrichloroethane and its metabolites (DDTs), chlorobenzenes (CBzs)—pentachlorobenzene and hexachlorobenzene—and hexachlorocyclohexanes were analyzed in all samples. The results show much higher settling fluxes of these compounds during DSWC than during common sedimentation processes. The area of highest deposition was located between 1000 and 1500 m depth and extended along the canyons and outside them showing their channelling effects but also overflows of dense shelf water from these canyons. Higher fluxes were observed near the bottom (30 m above bottom; mab) than at intermediate waters (500 mab) which is consistent with the formation and sinking of dense water close to the continental shelf and main displacement through the slope by the bottom. DSWC involved the highest settling fluxes of these compounds ever described in marine continental slopes and pelagic areas, e.g., peak values of PCBs (960 ng·m–2·d–1), DDTs (2900 ng·m–2·d–1), CBzs (340 ng·m–2·d–1) and lindane (180 ng·m–2·d–1)We thank all participants and crews of R/V Garcia del Cid and R/V Universitatis for their help and dedication. We are deeply indepted to Nicole Delsaut (CEFREM) for the prepatation of the trap samples for analysis. This research was supported by the HERMES (GOCE-CT-2005-511234-1) and HERMIONE (FP7-ENV-2008-1-226354) research projects. Financial support from the GRACCIE consolider project (CSD2007-00067) is acknowledged. This work was also sponsored by research groups 2009SGR1178 and 2009SGR1305 from Generalitat de CatalunyaPeer reviewe

Experiments of Interfacial Roughening in Hele-Shaw Flows with Weak Quenched Disorder

We have studied the kinetic roughening of an oil--air interface in a forced imbibition experiment in a horizontal Hele--Shaw cell with quenched disorder. Different disorder configurations, characterized by their persistence length in the direction of growth, have been explored by varying the average interface velocity v and the gap spacing b. Through the analysis of the rms width as a function of time, we have measured a growth exponent beta ~= 0.5 that is almost independent of the experimental parameters. The analysis of the roughness exponent alpha through the power spectrum have shown different behaviors at short (alpha_1) and long (alpha_2) length scales, separated by a crossover wavenumber q_c. The values of the measured roughness exponents depend on experimental parameters, but at large velocities we obtain alpha_1 ~= 1.3 independently of the disorder configuration. The dependence of the crossover wavenumber with the experimental parameters has also been investigated, measuring q_c ~ v^{0.47} for the shortest persistence length, in agreement with theoretical predictions.Comment: 20 pages, 22 figure

Rich dynamics and functional organization on topographically designed neuronal networks in vitro

Neuronal cultures are a prominent experimental tool to understand complex functional organization in neuronal assemblies. However, neurons grown on flat surfaces exhibit a strongly coherent bursting behavior with limited functionality. To approach the functional richness of naturally formed neuronal circuits, here we studied neuronal networks grown on polydimethylsiloxane (PDMS) topographical patterns shaped as either parallel tracks or square valleys.We followed the evolution of spontaneous activity in these cultures along 20 days in vitro using fluorescence calcium imaging. The networks were characterized by rich spatiotemporal activity patterns that comprised from small regions of the culture to its whole extent. Effective connectivity analysis revealed the emergence of spatially compact functional modules that were associated with both the underpinned topographical features and predominant spatiotemporal activity fronts. Our results showthe capacity of spatial constraints tomold activity and functional organization, bringing new opportunities to comprehend the structure-function relationship in living neuronal circuits

Absolute properties of the low-mass eclipsing binary CM Draconis

Spectroscopic and eclipsing binary systems offer the best means for determining accurate physical properties of stars, including their masses and radii. The data available for low-mass stars have yielded firm evidence that stellar structure models predict smaller radii and higher effective temperatures than observed, but the number of systems with detailed analyses is still small. In this paper we present a complete reanalysis of one of such eclipsing systems, CM Dra, composed of two dM4.5 stars. New and existing light curves as well as a radial velocity curve are modeled to measure the physical properties of both components. The masses and radii determined for the components of CM Dra are M1=0.2310+/-0.0009 Msun, M2=0.2141+/-0.0010 Msun, R1=0.2534+/-0.0019 Rsun, and R2=0.2396+/-0.0015 Rsun. With relative uncertainties well below the 1% level, these values constitute the most accurate properties to date for fully convective stars. This makes CM Dra a valuable benchmark for testing theoretical models. In comparing our measurements with theory, we confirm the discrepancies reported previously for other low-mass eclipsing binaries. These discrepancies seem likely to be due to the effects of magnetic activity. We find that the orbit of this system is slightly eccentric, and we have made use of eclipse timings spanning three decades to infer the apsidal motion and other related properties.Comment: 19 pages, 9 figures. Accepted for publication in Ap

The young open cluster NGC 7067 using Strömgren photometry

© 2016 The Authors. NGC 7067 is a young open cluster located in the direction between the first and the second Galactic quadrants and close to the Perseus spiral arm. This makes it useful for studies of the nature of the MilkyWay spiral arms. Strömgren photometry taken with theWide Field Camera at the Isaac Newton Telescope allowed us to compute individual physical parameters for the observed stars and hence to derive the cluster's physical parameters. Spectra from the 1.93-m telescope at the Observatoire de Haute-Provence helped to check and improve the results. We obtained photometry for 1233 stars, individual physical parameters for 515 and spectra for 9 of them. The 139 selected cluster members lead to a cluster distance of 4.4 ±0.4 kpc, with an age below log10(t(yr)) = 7.3 and a present mass of 1260 ± 160 M⊙. The morphology of the data reveals that the centre of the cluster is at (α, δ) = (21: 24: 13.69, +48: 00: 39.2) J2000, with a radius of 6.1 arcmin. Strömgren and spectroscopic data allowed us to improve the previous parameters available for the cluster in the literature