1 research outputs found
Long-read genome sequencing of the Japanese parasitic wasp <i>Copidosoma floridanum</i> (Hymenoptera: Encyrtidae)
Supplementary Table S1: Statistics of the alternate contigs generated by Hifiasm Supplementary File 1:Match coordinate data between Cflo-US and Cflo-J Hifi assemblySupplementary File 2:Match coordinate data between Cflo-J subread assembly and Cflo-J Hifi assemblySupplementary Table S2: Statistics summary generated by k-mer assembly evaluation by Merqury Supplementary Figure S1: Quality assessment of Cflo-J Hifi assembly by Merqury and Blobtools. (A) The kmer spectrum assembly plot generated by Merqury. Different contigs are indicated by different colors.(B) BlobPlot for the primary assembly and (C) alternate contig. Each circle is scaled proportionally to the length of the contig and is colored by taxonomic annotations based on BLAST search results. Contigs are arranged based on GC content (x-axis) and read coverage (y-axis). Histograms show cumulative base pair length in coverage (y-axis) and GC content (x-axis).Supplementary Table S3 Summary of repetitive elements in the Hifi primary contigSupplementary Table S4: All results of functional annotation by Fanflow4InsectsSupplementary Table S5 Transcripts with no corresponding protein in the Cflo-US datasetSupplementaryTable S6: Genomic location of vasa geneSupplementary File 3: Annotation GTF file generated by BRAKER</table