The H.E.S.S. View of the Central 200 Parsecs

The inner few hundred parsecs of our galaxy provide a laboratory for the study of the production and propagation of energetic particles. Very-high-energy gamma-rays provide an effective probe of these processes and, especially when combined with data from other wave-bands, gamma-rays observations are a powerful diagnostic tool. Within this central region, data from the H.E.S.S. instrument have revealed three discrete sources of very-high-energy gamma-rays and diffuse emission correlated with the distribution of molecular material. Here I provide an overview of these recent results from H.E.S.S.Comment: Proceedings of the Galactic Centre Workshop 200

Feasibility of using teleradiology to improve tuberculosis screening and case management in a district hospital in Malawi.

Malawi has one of the world's highest rates of human immunodeficiency virus (HIV) infection (10.6%), and southern Malawi, where Thyolo district is located, bears the highest burden in the country (14.5%). Tuberculosis, common among HIV-infected people, requires radiologic diagnosis, yet Malawi has no radiologists in public service. This hinders rapid and accurate diagnosis and increases morbidity and mortality

Constraining leptonic emission scenarios for the PeVatron candidate HESS J1702-420 with deep XMM-Newton observations

The unidentified TeV source HESS J1702-420 has recently been proposed as a new hadronic PeVatron candidate, based on the discovery of a small-scale emission sub-region with extremely hard gamma-ray spectrum up to 100 TeV (named HESS J1702-420A). Given the difficulty to discriminate between a hadronic or leptonic origin of the TeV emission, based on the H.E.S.S. measurement alone, we opted for a multi-wavelength approach. A deep X-ray observation was carried out using the XMM-Newton satellite, with the goal of probing a possible association with a hidden leptonic accelerator. No evidence of a clear counterpart for HESS J1702-420A was found in the X-ray data. After excluding an association with all nearby X-ray point sources, we derived strict upper limits on the diffuse X-ray emission and average magnetic field in the HESS J1702-420A region. We additionally report the serendipitous discovery of a new extended X-ray source, whose association with HESS J1702-420A is not obvious but cannot be ruled out either. A set of scripts dedicated to the multi-wavelength modeling of X-ray and gamma-ray data, based on Gammapy, Naima and Xspec, was developed in the context of this work and is made publicly available along with this paper.Comment: Accepted for publication in Astronomy & Astrophysics, 13 pages, 11 figures, 3 table

Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions.

Wheat is an economically, socially, and nutritionally important crop, however, aphid infestation can often reduce wheat yield through feeding and virus transmission. Through field phenotyping, we investigated aphid resistance in ancestral wheat Triticum monococcum (L.). Aphid (Rhopalosiphum padi (L.), Sitobion avenae (F.) and Metopolophium dirhodum (Wlk.)) populations and natural enemy presence (parasitised mummified aphids, ladybird adults and larvae and lacewing eggs and larvae) on two naturally susceptible wheat varieties, Triticum aestivum (L.) var. Solstice and T. monococcum MDR037, and three potentially resistant genotypes T. monococcum MDR657, MDR045 and MDR049 were monitored across three years of field trials. Triticum monococcum MDR045 and MDR049 had smaller aphid populations, whereas MDR657 showed no resistance. Overall, natural enemy presence was positively correlated with aphid populations; however, MDR049 had similar natural enemy presence to MDR037 which is susceptible to aphid infestation. It is hypothesised that alongside reducing aphid population growth, MDR049 also confers indirect resistance by attracting natural enemies. The observed resistance to aphids in MDR045 and MDR049 has strong potential for introgression into commercial wheat varieties, which could have an important role in Integrated Pest Management strategies to reduce aphid populations and virus transmission

Data model issues in the Cherenkov Telescope Array project

The planned Cherenkov Telescope Array (CTA), a future ground-based Very-High-Energy (VHE) gamma-ray observatory, will be the largest project of its kind. It aims to provide an order of magnitude increase in sensitivity compared to currently operating VHE experiments and open access to guest observers. These features, together with the thirty years lifetime planned for the installation, impose severe constraints on the data model currently being developed for the project. In this contribution we analyze the challenges faced by the CTA data model development and present the requirements imposed to face them. While the full data model is still not completed we show the organization of the work, status of the design, and an overview of the prototyping efforts carried out so far. We also show examples of specific aspects of the data model currently under development.Comment: In Proceedings of the 34th International Cosmic Ray Conference (ICRC2015), The Hague, The Netherlands. All CTA contributions at arXiv:1508.0589

Cherenkov Telescope Array Data Management

Very High Energy gamma-ray astronomy with the Cherenkov Telescope Array (CTA) is evolving towards the model of a public observatory. Handling, processing and archiving the large amount of data generated by the CTA instruments and delivering scientific products are some of the challenges in designing the CTA Data Management. The participation of scientists from within CTA Consortium and from the greater worldwide scientific community necessitates a sophisticated scientific analysis system capable of providing unified and efficient user access to data, software and computing resources. Data Management is designed to respond to three main issues: (i) the treatment and flow of data from remote telescopes; (ii) "big-data" archiving and processing; (iii) and open data access. In this communication the overall technical design of the CTA Data Management, current major developments and prototypes are presented.Comment: 8 pages, 2 figures, In Proceedings of the 34th International Cosmic Ray Conference (ICRC2015), The Hague, The Netherlands. All CTA contributions at arXiv:1508.0589

Direct versus indirect detection in mSUGRA with self-consistent halo models

We perform a detailed analysis of the detection prospects of neutralino dark matter in the mSUGRA framework. We focus on models with a thermal relic density, estimated with high accuracy using the DarkSUSY package, in the range favored by current precision cosmological measurements. Direct and indirect detection rates are computed implementing two models for the dark matter halo, tracing opposite regimes for the phase of baryon infall, with fully consistent density profiles and velocity distribution functions. This has allowed, for the first time, a fully consistent comparison between direct and indirect detection prospects. We discuss all relevant regimes in the mSUGRA parameter space, underlining relevant effects, and providing the basis for extending the discussion to alternative frameworks. In general, we find that direct detection and searches for antideuterons in the cosmic rays seems to be the most promising ways to search for neutralinos in these scenarios.Comment: 26 pages, 9 figure

Characterisation of the Fusarium graminearum-Wheat Floral Interaction

Fusarium Ear Blight is a destructive fungal disease of cereals including wheat and can contaminate the crop with various trichothecene mycotoxins. This investigation has produced a new β-glucuronidase (GUS) reporter strain that facilitates the quick and easy assessment of plant infection. The constitutively expressed gpdA:GUS strain of Fusarium graminearum was used to quantify the overall colonisation pattern. Histochemical and biochemical approaches confirmed, in susceptible wheat ear infections, the presence of a substantial phase of symptomless fungal growth. Separate analyses demonstrated that there was a reduction in the quantity of physiologically active hyphae as the wheat ear infection proceeded. A simplified linear system of rachis infection was then utilised to evaluate the expression of several TRI genes by RT-qPCR. Fungal gene expression at the advancing front of symptomless infection was compared with the origin of infection in the rachis. This revealed that TRI gene expression was maximal at the advancing front and supports the hypothesis that the mycotoxin deoxynivalenol plays a role in inhibiting plant defences in advance of the invading intercellular hyphae. This study has also demonstrated that there are transcriptional differences between the various phases of fungal infection and that these differences are maintained as the infection proceeds

The complete genome sequence of the phytopathogenic fungus Sclerotinia sclerotiorum reveals insights into the genome architecture of broad host range pathogens

Sclerotinia sclerotiorum is a phytopathogenic fungus with over 400 hosts including numerous economically important cultivated species. This contrasts many economically destructive pathogens that only exhibit a single or very few hosts. Many plant pathogens exhibit a “two-speed” genome. So described because their genomes contain alternating gene rich, repeat sparse and gene poor, repeat-rich regions. In fungi, the repeat-rich regions may be subjected to a process termed repeat-induced point mutation (RIP). Both repeat activity and RIP are thought to play a significant role in evolution of secreted virulence proteins, termed effectors. We present a complete genome sequence of S. sclerotiorum generated using Single Molecule Real-Time Sequencing technology with highly accurate annotations produced using an extensive RNA sequencing data set. We identified 70 effector candidates and have highlighted their in planta expression profiles. Furthermore, we characterized the genome architecture of S. sclerotiorum in comparison to plant pathogens that exhibit “two-speed” genomes. We show that there is a significant association between positions of secreted proteins and regions with a high RIP index in S. sclerotiorum but we did not detect a correlation between secreted protein proportion and GC content. Neither did we detect a negative correlation between CDS content and secreted protein proportion across the S. sclerotiorum genome. We conclude that S. sclerotiorum exhibits subtle signatures of enhanced mutation of secreted proteins in specific genomic compartments as a result of transposition and RIP activity. However, these signatures are not observable at the whole-genome scale