8,073 research outputs found
Why one-size-fits-all vaso-modulatory interventions fail to control glioma invasion: in silico insights
There is an ongoing debate on the therapeutic potential of vaso-modulatory
interventions against glioma invasion. Prominent vasculature-targeting
therapies involve functional tumour-associated blood vessel deterioration and
normalisation. The former aims at tumour infarction and nutrient deprivation
medi- ated by vascular targeting agents that induce occlusion/collapse of
tumour blood vessels. In contrast, the therapeutic intention of normalising the
abnormal structure and function of tumour vascular net- works, e.g. via
alleviating stress-induced vaso-occlusion, is to improve chemo-, immuno- and
radiation therapy efficacy. Although both strategies have shown therapeutic
potential, it remains unclear why they often fail to control glioma invasion
into the surrounding healthy brain tissue. To shed light on this issue, we
propose a mathematical model of glioma invasion focusing on the interplay
between the mi- gration/proliferation dichotomy (Go-or-Grow) of glioma cells
and modulations of the functional tumour vasculature. Vaso-modulatory
interventions are modelled by varying the degree of vaso-occlusion. We
discovered the existence of a critical cell proliferation/diffusion ratio that
separates glioma invasion re- sponses to vaso-modulatory interventions into two
distinct regimes. While for tumours, belonging to one regime, vascular
modulations reduce the tumour front speed and increase the infiltration width,
for those in the other regime the invasion speed increases and infiltration
width decreases. We show how these in silico findings can be used to guide
individualised approaches of vaso-modulatory treatment strategies and thereby
improve success rates
The Decay Properties of the Finite Temperature Density Matrix in Metals
Using ordinary Fourier analysis, the asymptotic decay behavior of the density
matrix F(r,r') is derived for the case of a metal at a finite electronic
temperature. An oscillatory behavior which is damped exponentially with
increasing distance between r and r' is found. The decay rate is not only
determined by the electronic temperature, but also by the Fermi energy. The
theoretical predictions are confirmed by numerical simulations
Total energy global optimizations using non orthogonal localized orbitals
An energy functional for orbital based calculations is proposed, which
depends on a number of non orthogonal, localized orbitals larger than the
number of occupied states in the system, and on a parameter, the electronic
chemical potential, determining the number of electrons. We show that the
minimization of the functional with respect to overlapping localized orbitals
can be performed so as to attain directly the ground state energy, without
being trapped at local minima. The present approach overcomes the multiple
minima problem present within the original formulation of orbital based
methods; it therefore makes it possible to perform calculations for an
arbitrary system, without including any information about the system bonding
properties in the construction of the input wavefunctions. Furthermore, while
retaining the same computational cost as the original approach, our formulation
allows one to improve the variational estimate of the ground state energy, and
the energy conservation during a molecular dynamics run. Several numerical
examples for surfaces, bulk systems and clusters are presented and discussed.Comment: 24 pages, RevTex file, 5 figures available upon reques
Quasiparticle Electronic structure of Copper in the GW approximation
We show that the results of photoemission and inverse photoemission
experiments on bulk copper can be quantitatively described within
band-structure theory, with no evidence of effects beyond the
single-quasiparticle approximation. The well known discrepancies between the
experimental bandstructure and the Kohn-Sham eigenvalues of Density Functional
Theory are almost completely corrected by self-energy effects.
Exchange-correlation contributions to the self-energy arising from 3s and 3p
core levels are shown to be crucial.Comment: 4 pages, 2 figures embedded in the text. 3 footnotes modified and 1
reference added. Small modifications also in the text. Accepted for
publication in PR
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Pre-clinical development of a lentiviral vector expressing the anti-sickling beta AS3 globin for gene therapy for sickle-cell disease
Density-functionals not based on the electron gas: Local-density approximation for a Luttinger liquid
By shifting the reference system for the local-density approximation (LDA)
from the electron gas to other model systems one obtains a new class of density
functionals, which by design account for the correlations present in the chosen
reference system. This strategy is illustrated by constructing an explicit LDA
for the one-dimensional Hubbard model. While the traditional {\it ab initio}
LDA is based on a Fermi liquid (the electron gas), this one is based on a
Luttinger liquid. First applications to inhomogeneous Hubbard models, including
one containing a localized impurity, are reported.Comment: 4 pages, 4 figures (final version, contains additional applications
and discussion; accepted by Phys. Rev. Lett.
On the growth of the Bergman kernel near an infinite-type point
We study diagonal estimates for the Bergman kernels of certain model domains
in near boundary points that are of infinite type. To do so, we
need a mild structural condition on the defining functions of interest that
facilitates optimal upper and lower bounds. This is a mild condition; unlike
earlier studies of this sort, we are able to make estimates for non-convex
pseudoconvex domains as well. This condition quantifies, in some sense, how
flat a domain is at an infinite-type boundary point. In this scheme of
quantification, the model domains considered below range -- roughly speaking --
from being ``mildly infinite-type'' to very flat at the infinite-type points.Comment: Significant revisions made; simpler estimates; very mild
strengthening of the hypotheses on Theorem 1.2 to get much stronger
conclusions than in ver.1. To appear in Math. An
Statistical mechanics of Floquet systems: the pervasive problem of near degeneracies
The statistical mechanics of periodically driven ("Floquet") systems in
contact with a heat bath exhibits some radical differences from the traditional
statistical mechanics of undriven systems. In Floquet systems all quasienergies
can be placed in a finite frequency interval, and the number of near
degeneracies in this interval grows without limit as the dimension N of the
Hilbert space increases. This leads to pathologies, including drastic changes
in the Floquet states, as N increases. In earlier work these difficulties were
put aside by fixing N, while taking the coupling to the bath to be smaller than
any quasienergy difference. This led to a simple explicit theory for the
reduced density matrix, but with some major differences from the usual time
independent statistical mechanics. We show that, for weak but finite coupling
between system and heat bath, the accuracy of a calculation within the
truncated Hilbert space spanned by the N lowest energy eigenstates of the
undriven system is limited, as N increases indefinitely, only by the usual
neglect of bath memory effects within the Born and Markov approximations. As we
seek higher accuracy by increasing N, we inevitably encounter quasienergy
differences smaller than the system-bath coupling. We therefore derive the
steady state reduced density matrix without restriction on the size of
quasienergy splittings. In general, it is no longer diagonal in the Floquet
states. We analyze, in particular, the behavior near a weakly avoided crossing,
where quasienergy near degeneracies routinely appear. The explicit form of our
results for the denisty matrix gives a consistent prescription for the
statistical mechanics for many periodically driven systems with N infinite, in
spite of the Floquet state pathologies.Comment: 31 pages, 3 figure
Van der Waals forces in density functional theory: perturbational long-range electron interaction corrections
Long-range exchange and correlation effects, responsible for the failure of
currently used approximate density functionals in describing van der Waals
forces, are taken into account explicitly after a separation of the
electron-electron interaction in the Hamiltonian into short- and long-range
components. We propose a "range-separated hybrid" functional based on a local
density approximation for the short-range exchange-correlation energy, combined
with a long-range exact exchange energy. Long-range correlation effects are
added by a second-order perturbational treatment. The resulting scheme is
general and is particularly well-adapted to describe van der Waals complexes,
like rare gas dimers.Comment: 8 pages, 1 figure, submitted to Phys. Rev.
Exact-exchange density-functional theory for quasi-two-dimensional electron gases
A simple exact-exchange density-functional method for a quasi-two-dimensional
electron gas with variable density is presented. An analytical expression for
the exact-exchange potential with only one occupied subband is provided,
without approximations. When more subbands are occupied the exact-exchange
potential is obtained numerically. The theory shows that, in contradiction with
LDA, the exact-exchange potential exhibits discontinuities and the system
suffers a zero-temperature first-order transition each time a subband is
occupied. Results suggesting that the translational symmetry might be
spontaneously broken at zero temperature are presented. An extension of the
theory to finite temperatures allows to describe a drop in the intersubband
spacing in good quantitative agreement with recent experiments.Comment: 14 pages, 3 figure
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