New subway-integrated city logistics system

Seventh International Conference on City Logistics which was held on June 7- 9, 2011, Mallorca, SpainIn this paper, we propose a new city logistics system by integrating public subway service with conventional freight vehicle operation to transport goods effectively from the suburbs to the city center. This system mitigates urban transport problems, such as traffic congestion, environmental impact, and delivery delay, particularly during winter when heavy snowfall impairs traffic operation. To verify the effectiveness of this system, we conducted a pilot project. From our pilot project, we found that this system can be expected to enhance the smooth flow of goods, reduce the number of on-street unloading vehicles, and protect the environment. We also confirmed that the public positively accepted this project

High-precision Absolute Distance Measurement using Dual-Laser Frequency Scanned Interferometry Under Realistic Conditions

In this paper, we report on new high-precision absolute distance measurements performed with frequency scanned interferometry using a pair of single-mode optical fibers. Absolute distances were determined by counting the interference fringes produced while scanning the frequencies of the two chopped lasers. High-finesse Fabry-Perot interferometers were used to determine frequency changes during scanning. Dual lasers with oppositely scanning directions, combined with a multi-distance-measurement technique previously reported, were used to cancel drift errors and to suppress vibration effects and interference fringe uncertainties. Under realistic conditions, a precision about 0.2 microns was achieved for a distance of 0.41 meters.Comment: 14 pages, 5 figures, submitted to Applied Optic

Minor Contribution of Quasars to Ionizing Photon Budget at z~6: Update on Quasar Luminosity Function at the Faint-end with Subaru/Suprime-Cam

We constrain the quasar contribution to cosmic reionization based on our deep optical survey of z~6 quasars down to z_R=24.15 using Subaru/Suprime-Cam in three UKIDSS-DXS fields covering 6.5 deg^2. In Kashikawa et al. (2015), we select 17 quasar candidates and report our initial discovery of two low-luminosity quasars (M_1450~ -23) from seven targets, one of which might be a Lyman alpha emitting galaxy. From an additional optical spectroscopy, none of the four candidates out of the remaining ten turn out to be genuine quasars. Moreover, the deeper optical photometry provided by the Hyper Suprime-Cam Subaru Strategic Program (HSC-SSP) shows that, unlike the two already-known quasars, the i-z and z-y colors of the last six candidates are consistent with M- or L-type brown dwarfs. Therefore, the quasar luminosity function (QLF) in the previous paper is confirmed. Compiling QLF measurements from the literature over a wide magnitude range, including an extremely faint AGN candidate from Parsa et al. (2017}, to fit them with a double power-law, we find that the best-fit faint-end slope is alpha=-2.04^+0.33_-0.18 (-1.98^+0.48_-0.21) and characteristic magnitude is M_1450^*=-25.8^+1.1_-1.9 (-25.7^+1.0_-1.8) in the case of two (one) quasar detection. Our result suggests that, if the QLF is integrated down to M_1450=-18, quasars produce ~1-12% of the ionizing photons required to ionize the whole universe at z~6 with 2sigma confidence level, assuming that the escape fraction is f_esc=1 and the IGM clumpy factor is C=3. Even when the systematic uncertainties are taken into account, our result supports the scenario that quasars are the minor contributors of reionization.Comment: 8 pages, 3 figures, ApJL accepte

Novel Mouse Xenograft Models Reveal a Critical Role of CD4+ T Cells in the Proliferation of EBV-Infected T and NK Cells

Epstein-Barr virus (EBV), a ubiquitous B-lymphotropic herpesvirus, ectopically infects T or NK cells to cause severe diseases of unknown pathogenesis, including chronic active EBV infection (CAEBV) and EBV-associated hemophagocytic lymphohistiocytosis (EBV-HLH). We developed xenograft models of CAEBV and EBV-HLH by transplanting patients' PBMC to immunodeficient mice of the NOD/Shi-scid/IL-2Rγnull strain. In these models, EBV-infected T, NK, or B cells proliferated systemically and reproduced histological characteristics of the two diseases. Analysis of the TCR repertoire expression revealed that identical predominant EBV-infected T-cell clones proliferated in patients and corresponding mice transplanted with their PBMC. Expression of the EBV nuclear antigen 1 (EBNA1), the latent membrane protein 1 (LMP1), and LMP2, but not EBNA2, in the engrafted cells is consistent with the latency II program of EBV gene expression known in CAEBV. High levels of human cytokines, including IL-8, IFN-γ, and RANTES, were detected in the peripheral blood of the model mice, mirroring hypercytokinemia characteristic to both CAEBV and EBV-HLH. Transplantation of individual immunophenotypic subsets isolated from patients' PBMC as well as that of various combinations of these subsets revealed a critical role of CD4+ T cells in the engraftment of EBV-infected T and NK cells. In accordance with this finding, in vivo depletion of CD4+ T cells by the administration of the OKT4 antibody following transplantation of PBMC prevented the engraftment of EBV-infected T and NK cells. This is the first report of animal models of CAEBV and EBV-HLH that are expected to be useful tools in the development of novel therapeutic strategies for the treatment of the diseases

Novel Association Strategy with Copy Number Variation for Identifying New Risk Loci of Human Diseases

Copy number variations (CNV) are important causal genetic variations for human disease; however, the lack of a statistical model has impeded the systematic testing of CNVs associated with disease in large-scale cohort.Here, we developed a novel integrated strategy to test CNV-association in genome-wide case-control studies. We converted the single-nucleotide polymorphism (SNP) signal to copy number states using a well-trained hidden Markov model. We mapped the susceptible CNV-loci through SNP site-specific testing to cope with the physiological complexity of CNVs. We also ensured the credibility of the associated CNVs through further window-based CNV-pattern clustering. Genome-wide data with seven diseases were used to test our strategy and, in total, we identified 36 new susceptible loci that are associated with CNVs for the seven diseases: 5 with bipolar disorder, 4 with coronary artery disease, 1 with Crohn's disease, 7 with hypertension, 9 with rheumatoid arthritis, 7 with type 1 diabetes and 3 with type 2 diabetes. Fifteen of these identified loci were validated through genotype-association and physiological function from previous studies, which provide further confidence for our results. Notably, the genes associated with bipolar disorder converged in the phosphoinositide/calcium signaling, a well-known affected pathway in bipolar disorder, which further supports that CNVs have impact on bipolar disorder.Our results demonstrated the effectiveness and robustness of our CNV-association analysis and provided an alternative avenue for discovering new associated loci of human diseases

Gene Organization in Rice Revealed by Full-Length cDNA Mapping and Gene Expression Analysis through Microarray

Rice (Oryza sativa L.) is a model organism for the functional genomics of monocotyledonous plants since the genome size is considerably smaller than those of other monocotyledonous plants. Although highly accurate genome sequences of indica and japonica rice are available, additional resources such as full-length complementary DNA (FL-cDNA) sequences are also indispensable for comprehensive analyses of gene structure and function. We cross-referenced 28.5K individual loci in the rice genome defined by mapping of 578K FL-cDNA clones with the 56K loci predicted in the TIGR genome assembly. Based on the annotation status and the presence of corresponding cDNA clones, genes were classified into 23K annotated expressed (AE) genes, 33K annotated non-expressed (ANE) genes, and 5.5K non-annotated expressed (NAE) genes. We developed a 60mer oligo-array for analysis of gene expression from each locus. Analysis of gene structures and expression levels revealed that the general features of gene structure and expression of NAE and ANE genes were considerably different from those of AE genes. The results also suggested that the cloning efficiency of rice FL-cDNA is associated with the transcription activity of the corresponding genetic locus, although other factors may also have an effect. Comparison of the coverage of FL-cDNA among gene families suggested that FL-cDNA from genes encoding rice- or eukaryote-specific domains, and those involved in regulatory functions were difficult to produce in bacterial cells. Collectively, these results indicate that rice genes can be divided into distinct groups based on transcription activity and gene structure, and that the coverage bias of FL-cDNA clones exists due to the incompatibility of certain eukaryotic genes in bacteria

Effects of Improper Mechanical Force on the Production of Sonic Hedgehog, RANKL, and IL-6 in Human Periodontal Ligament Cells In Vitro

Improper mechanical stress may induce side effects during orthodontic treatment. If the roots and alveolar bones are extensively resorbed following excess mechanical stress, unplanned tooth mobility and inflammation can occur. Although multiple factors are believed to contribute to the development of side effects, the cause is still unknown. Sonic hedgehog (Shh), one of the hedgehog signals significantly associated with cell growth and cancer development, promotes osteoclast formation in the jawbone. Shh may be associated with root and bone resorptions during orthodontic treatment. In this study, we investigated the relationships between Shh, RANKL, and IL-6 in human periodontal ligament (hPDL) cells exposed to improper mechanical force. Weights were placed on hPDL cells and human gingival fibroblasts (HGFs) for an optimal orthodontic force group (1.0 g/cm2) and a heavy orthodontic force group (4.0 g/cm2). A group with no orthodontic force was used as a control group. Real-time PCR, SDS-PAGE, and Western blotting were performed to examine the effects of orthodontic forces on the expression of Shh, RANKL, and IL-6 at 2, 4, 6, 8, 12, and 24 h after the addition of pressure. The protein expression of Shh was not clearly induced by orthodontic forces of 1.0 and 4.0 g/cm2 compared with the control in HGFs and hPDL cells. In contrast, RANKL and IL-6 gene and protein expression was significantly induced by 1.0 and 4.0 g/cm2 in hPDL cells for forces lasting 6~24 h. However, neither protein was expressed in HGFs. RANKL and IL-6 expressions in response to orthodontic forces and in the control were clearly inhibited by Shh inhibitor RU-SKI 43. Shh did not directly link to RANKL and IL-6 for root and bone resorptions by orthodontic force but was associated with cell activities to be finally guided by the production of cytokines in hPDL cells