1,829 research outputs found

    XQuery optimization in relational database systems

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    Overview of query optimization in XML database systems

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    A preliminary investigation of the AUDIT and DUDIT in comparison to biomarkers for alcohol and drug use among HIV-infected clinic attendees in Cape Town, South Africa

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    Objective: There is growing concern about the effect of substance use on HIV treatment outcomes. The study objectives included: (i) evaluating whether the use of validated questionnaires (AUDIT and DUDIT) provide useful and consistent information of alcohol and drug consumption when compared with the use of biomarkers of alcohol in (urine and hair) and drugs in (urine) and (ii) assessing the feasibility of using self-report measures compared with urine and hair tests.Method: Participants were HIV positive patients attending an HIV community health clinic in Kraaifontein, Cape Town. Hair and urine samples were collected and analysed for alcohol, in Fatty Acid Ethyl Esters (FAEE) and in Ethyl Glucuronide and (EtG), and drugs. Biological markers were compared with self-report measures of alcohol and drug consumption in terms of sensitivity, specificity. Forty-three participants completedthe self-report measures, while 30 provided hair and urine samples. Results: On the AUDIT, 18 (41.9%) participants screened positive for harmful and hazardous drinking and 13 (30.2%) participants on the DUDIT screened positive for having a drug-related problem. Two of 30 participants (7%) tested positive for alcohol abuse on FAEE analysis. For EtG, 6 of 24 (25%) participants tested positive for alcohol abuse. On hair drug analysis, all 30 participants tested negative for cannabis, amphetamines, opiates, cocaine, PCP and methaqualone. On the urinalysis, 1of 30 participants tested positive for cannabis and everyone tested negative for all otherdrugs included in the screening.Conclusion: Substance use among patients attending HIV clinics appears to be a problem, especially alcohol. Self-report measures seem to be a more cost effective option for screening of alcohol and drug abuse inresource poor settings

    Annotation and Identification of Several Glycerolipid Metabolic Related Ortholog Genes; Mrub_0437, Mrub_1813 and Mrub_2759 In The Organism \u3cem\u3eMeithermus Ruber\u3c/em\u3e and Their Predicted Respective Orthologs b3926, b4042 and BO514 Found In \u3cem\u3eE.coli\u3c/em\u3e.

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    We predict Mrub_0437 encodes the enzyme glycerol kinase (DNA coordinates [417621..419183), which is an intermediary step of the glycerolipid metabolic pathway (KEGG map00561), It catalyzes the conversion of glycerol to sn-Glycerol-3-phosphate. The E. coli K12 MG1655 ortholog is predicted to be b3926. We predict Mrub_1813 encodes the enzyme diacylglycerol kinase (DNA coordinates [1864659..1865063), which is an intermediary step of the glycerolipid metabolic pathway (KEGG map00561), It catalyzes the conversion of 1,2-diacyl-sn-glycerol to 1,2-diacyl-sn-glycerol 3-phosphate. The E. coli K12 MG1655 ortholog is predicted to be b4042. We predict Mrub_2759 encodes the enzyme glycerol kinase (DNA coordinates [2799712..2800665), which is an intermediary step of the glycerolipid metabolic pathway (KEGG map00561), It catalyzes the conversion of d-Glycerate to 2-phospho-d-glycerate. The E. coli K12 MG1655 ortholog is predicted to be B0514

    Opinions of UK gastroenterology consultants in the application of artificial intelligence in endoscopy

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    TRITIMED; a multidisciplinary project to improve drought adaptation in durum wheat

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    none6noneHABASH D.; ARAUS J.L.; LATIRI K.; KADER A.A.; TUBEROSA R.; NACHIT M.HABASH D.; ARAUS J.L.; LATIRI K.; KADER A.A.; TUBEROSA R.; NACHIT M

    Validation of an electrogoniometry system as a measure of knee kinematics during activities of daily living

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    Purpose: The increasing use of electrogoniometry (ELG) in clinical research requires the validation of different instrumentation. The purpose of this investigation was to examine the concurrent validity of an ELG system during activities of daily living. Methods: Ten asymptomatic participants gave informed consent to participate. A Biometrics SG150 electrogoniometer was directly compared to a 12 camera three dimensional motion analysis system during walking, stair ascent, stair descent, sit to stand, and stand to sit activities for the measurement of the right knee angle. Analysis of validity was undertaken by linear regression. Standard error of estimate (SEE), standardised SEE (SSEE), and Pearson’s correlation coefficient r were computed for paired trials between systems for each functional activity. Results: The 95% confidence interval of SEE was reasonable between systems across walking (LCI = 2.43 °; UCI = 2.91 °), stair ascent (LCI = 2.09 °; UCI = 2.42 °), stair descent (LCI = 1.79 °; UCI = 2.10 °), sit to stand (LCI = 1.22 °; UCI = 1.41 °), and stand to sit (LCI = 1.17 °; UCI = 1.34 °). Pearson’s correlation coefficient r across walking (LCI = 0.983; UCI = 0.990), stair ascent (LCI = 0.995; UCI = 0.997), stair descent (LCI = 0.995; UCI = 0.997), sit to stand (LCI = 0.998; UCI = 0.999), and stand to sit (LCI = 0.996; UCI = 0.997) was indicative of a strong linear relationship between systems. Conclusion: ELG is a valid method of measuring the knee angle during activities representative of daily living. The range is within that suggested to be acceptable for the clinical evaluation of patients with musculoskeletal conditions

    Data describing the eco-physiological responses of Elaeagnus angustifolia grown under contrasting regime of water and fertilizer in coal-mined spoils

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    To improve our understanding of how coal mining areas can be re-vegetated and ecosystem function restored, we examined the potential effects of five water (W) regimes (40, 50, 60, 70 and 80% of field capacity), five nitrogen (N) (0, 24, 60, 96 and 120 mg kg‒1 soil) and five phosphorus (P) fertilizer doses (0, 36, 90, 144 and 180 mg kg‒1 soil), which control the growth and development of Elaeagnus angustifolia under adverse environmental conditions. To optimize the W-N-P application rate, three factors and five levels of central composite design along with an optimization technique named response surface methodology were utilized. Here we provide data on root-shoot biomass ratio, leaf dry matter content, stomatal conductance, chlorophyll (Chl) a, Chl b, membrane stability index and soluble protein content of E. angustifolia. The data described in this article are available in Mendeley Data, DOI: 10.17632/2vfbrdxyf2.2 [1]. These data could be used to evaluate the improvement in growth performance of E. angustifolia subjected to various regimes of W, N and P. This dataset showed that E. angustifolia grew optimally in coal-mine spoils when irrigated at 66% of field capacity and supplemented with 74.0 mg N and 36.0 mg P kg‒1 soil. This could considerably help the success of revegetation in coal-mined degraded arid areas where W is scarce. This article contains data complementary to the main research entitled "Fine-tuning of soil water and nutrient fertilizer levels for the ecological restoration of coal-mined spoils using Elaeagnus angustifolia" in the Journal of Environmental Management (Roy et al., 2020)

    Socioeconomic Disparities Do Not Affect Outcomes in Acute Limb Ischemia

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    Objective: The association between socioeconomic status (SES) and outcome after acute limb ischemia (ALI) is largely unknown. We aimed to determine whether SES is associated with worse presentations and outcomes for patients with ALI. Methods: We performed a retrospective review of a prospectively collected database containing all patients who had presented with ALI between April 2016 and October 2020 to a tertiary care center. SES was quantified using individual variables (median household income, level of education, employment) and a composite endpoint, the neighborhood deprivation index (NDI). The NDI is a standardized and reproducible index that uses census tract data, with a higher number indicating lower SES status. The NDI summarizes eight domains of socioeconomic deprivation. ALI severity was categorized using the Rutherford classification. The associations between SES and the severity of ALI at presentation and between SES and the outcomes were analyzed using bivariate analysis of variance, an independent t test, and multivariate logistic regression, as appropriate. Results: During the study period, 278 patients were treated for ALI, of whom 211 had complete SES data available. Their mean age was 64 years; 55% were men and 57% were white. The Rutherford classification of disease severity was grade 1, 2a, 2b, and 3 for 6%, 54%, 32%, and 8%, respectively. Patients with a low SES status using the NDI were more likely to have a history of peripheral arterial disease and chronic kidney disease at presentation (Table). The etiology (thrombotic vs embolic) was not associated with SES. No significant differences were seen between SES and the severity of ALI at presentation ( P = .96) or the treatment modality ( P = .80). We found no association between SES and either 30-day or 1-year limb loss or mortality (Table). Lower SES (higher NDI) was associated with increased 30-day readmissions ( P = .021). This association persisted on multivariate analysis ( P = .023). Conclusions: SES was not associated with the severity of ALI at presentation. Although SES was associated with the presence of peripheral arterial disease and chronic kidney disease at presentation and higher readmission rates for patients with ALI, SES was not a predictor of short-term or 1-year limb loss or mortality. In the present study, ALI presentation and treatment outcome were independent of SES
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