β-aminobutyric acid induces disease resistance against Botrytis cinerea in grape berries by a cellular priming mechanism

The present study was performed to investigate the effect of β-aminobutyric acid (BABA) treatment on defence activation in grape berries and to analyse its cellular mechanism. The results implied that BABA treatment at an effective concentration of 20 mM significantly inhibited gray mould rot caused by Botrytis cinerea in grape berries by inducing resistance. Accordingly, 20 mM BABA triggered a priming defence in grape suspension cells, since only the BABA-treated cells exhibited an accelerated ability for augmenting defence responses upon the pathogen inoculation. The primed cellular reactions were related to an early H2O2 burst, prompt accumulation of stilbene phytoalexins and activation of PR genes. Thus, we assume that 20 mM BABA can induce resistance to B. cinerea infection in intact grape berries perhaps via intercellular priming defence. Moreover, the BABA-induced priming defence is verified, because no negative effects on cell growth, anthocyanin synthesis, and quality impairment in either grape cells or intact berries were observed under low pathogenic pressure

A Balance of Lipid-Sensing Mechanisms in the Brain and Liver

Recent work has cast a spotlight on the brain as a nutrient-sensing organ that regulates the body's metabolic processes. Here we discuss the physiological and molecular mechanisms of brain lipid sensing and compare these mechanisms to liver lipid sensing. A direct comparison between the lipid-sensing mechanisms in the brain and liver reveals similar biochemical/molecular but opposing physiological mechanisms in operation. We propose that an imbalance between the lipid-sensing mechanisms in the brain and liver may contribute to obesity-associated type 2 diabetes

Modulation of Ca2+-dependent anion secretion by protein kinase C in normal and cystic fibrosis pancreatic duct cells

AbstractThe study investigated the role of protein kinase C (PKC) in the modulation of agonist-induced Ca2+-dependent anion secretion by pancreatic duct cells. The short-circuit current (ISC) technique was used to examine the effect of PKC activation and inhibition on subsequent ATP, angiotensin II and ionomycin-activated anion secretion by normal (CAPAN-1) and cystic fibrosis (CFPAC-1) pancreatic duct cells. The ISC responses induced by the Ca2+-mobilizing agents, which had been previously shown to be attributed to anion secretion, were enhanced in both CAPAN-1 and CFPAC-1 cells by PKC inhibitors, staurosporine, calphostin C or chelerythrine. On the contrary, a PKC activator, phorbol 12-myristate 13-acetate (PMA), was found to suppress the agonist-induced ISC in CFPAC-1 cells and the ionomycin-induced ISC in CAPAN-1 cells. An inactive form of PMA, 4αd-phorbol 12,13-didecanote (4αD), was found to exert insignificant effect on the agonist-induced ISC, indicating a specific effect of PMA. Our data suggest a role of PKC in modulating agonist-induced Ca2+-dependent anion secretion by pancreatic duct cells. Therapeutic strategy to augment Ca2+-activated anion secretion by cystic fibrosis pancreatic duct cells may be achieved by inhibition or down-regulation of PKC

Low-Background gamma counting at the Kimballton Underground Research Facility

The next generation of low-background physics experiments will require the use of materials with unprecedented radio-purity. A gamma-counting facility at the Kimballton Underground Research Facility (KURF) has been commissioned to perform initial screening of materials for radioactivity primarily from nuclides in the 238U and 232Th decay chains, 40K and cosmic-ray induced isotopes. The facility consists of two commercial low-background high purity germanium (HPGe) detectors. A continuum background reduction better than a factor of 10 was achieved by going underground. This paper describes the facility, detector systems, analysis techniques and selected assay results.Comment: 7 pages, 7 figures. Submitted to NIM

A Theory of a Spot

We present a simple inflationary scenario that can produce arbitrarily large spherical underdense or overdense regions embedded in a standard Lambda cold dark matter paradigm, which we refer to as bubbles. We analyze the effect such bubbles would have on the Cosmic Microwave Background (CMB). For super-horizon sized bubble in the vicinity of the last scattering surface, a signal is imprinted onto CMB via a combination of Sach-Wolfe and an early integrated Sach-Wolfe (ISW) effects. Smaller, sub-horizon sized bubbles at lower redshifts (during matter domination and later) can imprint secondary anisotropies on the CMB via Rees-Sciama, late-time ISW and Ostriker-Vishniac effects. Our scenario, and arguably most similar inflationary models, produce bubbles which are over/underdense in potential: in density such bubbles are characterized by having a distinct wall with the interior staying at the cosmic mean density. We show that such models can potentially, with only moderate fine tuning, explain the \emph{cold spot}, a non-Gaussian feature identified in the Wilkinson Microwave Anisotropy Probe (WMAP) data by several authors. However, more detailed comparisons with current and future CMB data are necessary to confirm (or rule out) this scenario.Comment: 19 pages, 19 figures, added references and explanations, JCAP in pres

Generalized Buneman pruning for inferring the most parsimonious multi-state phylogeny

Accurate reconstruction of phylogenies remains a key challenge in evolutionary biology. Most biologically plausible formulations of the problem are formally NP-hard, with no known efficient solution. The standard in practice are fast heuristic methods that are empirically known to work very well in general, but can yield results arbitrarily far from optimal. Practical exact methods, which yield exponential worst-case running times but generally much better times in practice, provide an important alternative. We report progress in this direction by introducing a provably optimal method for the weighted multi-state maximum parsimony phylogeny problem. The method is based on generalizing the notion of the Buneman graph, a construction key to efficient exact methods for binary sequences, so as to apply to sequences with arbitrary finite numbers of states with arbitrary state transition weights. We implement an integer linear programming (ILP) method for the multi-state problem using this generalized Buneman graph and demonstrate that the resulting method is able to solve data sets that are intractable by prior exact methods in run times comparable with popular heuristics. Our work provides the first method for provably optimal maximum parsimony phylogeny inference that is practical for multi-state data sets of more than a few characters.Comment: 15 page

Shear viscosity of hot scalar field theory in the real-time formalism

Within the closed time path formalism a general nonperturbative expression is derived which resums through the Bethe-Salpter equation all leading order contributions to the shear viscosity in hot scalar field theory. Using a previously derived generalized fluctuation-dissipation theorem for nonlinear response functions in the real-time formalism, it is shown that the Bethe-Salpeter equation decouples in the so-called (r,a) basis. The general result is applied to scalar field theory with pure lambda*phi**4 and mixed g*phi**3+lambda*phi**4 interactions. In both cases our calculation confirms the leading order expression for the shear viscosity previously obtained in the imaginary time formalism.Comment: Expanded introduction and conclusions. Several references and a footnote added. Fig.5 and its discussion in the text modified to avoid double counting. Signs in Eqs. (45) and (53) correcte

Ago-2-Mediated Slicer Activity Is Essential for Anti-Flaviviral Efficacy of RNAi

RNA interference can be mediated by fully complementary siRNA or partially complementary miRNA. siRNAs are widely used to suppress viral replication and the fully complementary siRNA bound Ago-2 in the RISC is known to degrade the target RNA. Although other argonaute proteins lacking slicer activity can also bind oligonucleotides with both si and miRNA structures, whether they can also contribute to antiviral effects is not entirely clear. We tested si and miRNA structured oligos for target repression in dual luciferase assays as well as for inhibition of Dengue and West Nile virus replication in ES cells expressing individual Ago proteins. In luciferase assays, both fully complementary and partially complementary oligos effectively repressed their targets in all individual Ago expressing cell lines, although the efficacy with fully complementary oligos was higher in Ago-2+ cells. However, partially complementary oligos had no effect on virus replication in any cell line, while fully complementary siRNAs were highly effective in Ago-2 expressing, but not in cells expressing other Ago proteins. This occurred irrespective of whether the target sequences were located in the coding region or 3′UTR of the virus. We conclude that Ago-2 slicer activity is essential for anti-viral efficacy of siRNAs and miRNA-mediated translational repression/transcript destabilization is too weak to suppress the abundantly expressed flaviviral proteins

Novel family- and genus-specific DNA markers in Mugilidae

In this study, we identified novel family- and genus-specific DNA markers in Mugilidae fish. Genomic DNA was isolated from the blood of fish of 15 families and eighty (80) random primers were used for random amplified polymorphic DNA (RAPD) fingerprinting. When the primer OPAV04 was employed, a novel specific PCR product was observed in the Mugilidae family. In addition, another novel specific PCR product was also observed in the Liza genus while using primer OPAV10. Sequencing analysis revealed that the novel family- and genus-specific DNA fragments were 857 and 419 bp, respectively, and no similar sequences were found in GenBank. Two primers sets were designed based on the family- and genus-specific sequences to confirm the RAPD results and the 571 and 187 bp predicted bands were successfully amplified by PCR. Intriguingly, these two novel specific DNA markers were also effectively used for terrestrial and aquatic animal discrimination. Therefore, the novel family- and genus-specific DNA markers identified in this study can be used as an effective tool for rapid and accurate determination of the Mugilidae family and Liza genus, and even for cross-species identification

How do cities approach policy innovation and policy learning? A study of 30 policies in Northern Europe and North America

This paper reports on a study of current practice in policy transfer, and ways in which its effectiveness can be increased. A literature review identifies important factors in examining the transfer of policies. Results of interviews in eleven cities in Northern Europe and North America investigate these factors further. The principal motivations for policy transfer were strategic need and curiosity. Local officials and politicians dominated the process of initiating policy transfer, and local officials were also the leading players in transferring experience. A range of information sources are used in the search process but human interaction was the most important source of learning for two main reasons. First, there is too much information available through the Internet and the search techniques are not seen to be wholly effective in identifying the necessary information. Secondly, the information available on websites, portals and even good practice guides is not seen to be of mixed quality with risks of focussing only on successful implementation and therefore subject to some bias. Officials therefore rely on their trusted networks of peers for lessons as here they can access the ‘real implementation’ story and the unwritten lessons. Organisations which have a culture that is supportive of learning from elsewhere had strong and broad networks of external contacts and resourced their development whilst others are more insular or inward looking and reluctant to invest in policy lessons from elsewhere. Solutions to the problems identified in the evidence base are proposed