6,739 research outputs found
Stress and Strain in Flat Piling of Disks
We have created a flat piling of disks in a numerical experiment using the
Distinct Element Method (DEM) by depositing them under gravity. In the
resulting pile, we then measured increments in stress and strain that were
associated with a small decrease in gravity. We first describe the stress in
terms of the strain using isotropic elasticity theory. Then, from a
micro-mechanical view point, we calculate the relation between the stress and
strain using the mean strain assumption. We compare the predicted values of
Young's modulus and Poisson's ratio with those that were measured in the
numerical experiment.Comment: 9 pages, 1 table, 8 figures, and 2 pages for captions of figure
The effects of grain shape and frustration in a granular column near jamming
We investigate the full phase diagram of a column of grains near jamming, as
a function of varying levels of frustration. Frustration is modelled by the
effect of two opposing fields on a grain, due respectively to grains above and
below it. The resulting four dynamical regimes (ballistic, logarithmic,
activated and glassy) are characterised by means of the jamming time of
zero-temperature dynamics, and of the statistics of attractors reached by the
latter. Shape effects are most pronounced in the cases of strong and weak
frustration, and essentially disappear around a mean-field point.Comment: 17 pages, 19 figure
Kondo effect in a one dimensional d-wave superconductor
We derive a solvable resonant-level type model, to describe an impurity spin
coupled to zero-energy bound states localized at the edge of a one dimensional
d-wave superconductor. This results in a two-channel Kondo effect with a quite
unusual low-temperature thermodynamics. For instance, the local impurity
susceptibility yields a finite maximum at zero temperature (but no
logarithmic-divergence) due to the splitting of the impurity in two Majorana
fermions. Moreover, we make comparisons with the Kondo effect occurring in a
two dimensional d-wave superconductor.Comment: 9 pages, final version; To be published in Europhysics Letter
Potential diagnostic and prognostic values of detecting promoter hypermethylation in the serum of patients with gastric cancer
While there is no reliable serum biomarker for the diagnosis and monitoring of patients with gastric cancer, we tested the potential diagnostic and prognostic values of detecting methylation changes in the serum of gastric cancer patients. DNA was extracted from the pretherapeutic serum of 60 patients with confirmed gastric adenocarcinoma and 22 age-matched noncancer controls. Promoter hypermethylation in 10 tumour-related genes (APC, E-cadherin, GSTP1, hMLH1, MGMT, p15, p16, SOCS1, TIMP3 and TGF-beta RII) was determined by quantitative methylation-specific PCR (MethyLight). Preferential methylation in the serum DNA of gastric cancer patients was noted in APC (17%), E-cadherin (13%), hMLH1 (41%) and TIMP3 (17%) genes. Moreover, patients with stages III/IV diseases tended to have higher concentrations of methylated APC (P=0.08), TIMP3 (P=0.005) and hMLH1 (P=0.03) in the serum. In all, 33 cancers (55%) had methylation detected in the serum in at least one of these four markers, while three normal subjects had methylation detected in the serum (specificity 86%). The combined use of APC and E-cadherin methylation markers identified a subgroup of cancer patients with worse prognosis (median survival 3.3 vs 16.1 months, P=0.006). These results suggest that the detection of DNA methylation in the serum may carry both diagnostic and therapeutic values in gastric cancer patients
Association between cyclo-oxygenase-2 overexpression and missense p53 mutations in gastric cancer
Wild-type p53 competitively binds to the promoter region of COX-2 in vitro and inhibits its transcription. We examined the association between p53 mutation and COX-2 expression in gastric cancer. COX-2 over-expression was seen in 19 (48.7%) cases. These tumours had more lymph-node metastasis (P = 0.048) and tended to have a poorer survival (P = 0.07). Missense mutations of p53 were detected in 20 (51.3%) patients and had a significantly stronger COX-2 expression than tumours without p53 mutation (P = 0.016). Our results suggest a link between p53 mutation and COX-2 overexpression in gastric cancer. © 2001 Cancer Research Campaign http://www.bjcancer.co
Gate-Controlled Ionization and Screening of Cobalt Adatoms on a Graphene Surface
We describe scanning tunneling spectroscopy (STS) measurements performed on
individual cobalt (Co) atoms deposited onto backgated graphene devices. We find
that Co adatoms on graphene can be ionized by either the application of a
global backgate voltage or by the application of a local electric field from a
scanning tunneling microscope (STM) tip. Large screening clouds are observed to
form around Co adatoms ionized in this way, and we observe that some intrinsic
graphene defects display a similar behavior. Our results provide new insight
into charged impurity scattering in graphene, as well as the possibility of
using graphene devices as chemical sensors.Comment: 19 pages, 4 figure
A culture-independent and culture-dependent study of the bacteria community from the bedrock soil interface
In nutrient limited soils, minerals constitute a major reservoir of bio-essential elements. Consequently, the release of nutritive elements during weathering is crucial. Bacteria have been shown to enhance weathering rates; however, there has been limited work that has focused on the bacterial weathering of bedrock or parent rock, which are the major sources of minerals, in nutrient limiting soils. In this study, both a culture-independent and culture-dependent approach was used to study the bacterial community at the interface between basaltic bedrock and nutrient limiting soil in Cadiar Idris region of Snowdonia National Park, United Kingdom. High throughput sequencing method, Ion Torrent, was used to characterise the bacterial community, which generated over 250,000 sequences. Taxonomical assignment demonstrated that approximately 50% (125,000 sequences) of the community consisted of the orders Actinomycetales, Burkholderiales, Clostridales, Bacillales, Rhizobiales and Acidobacterium, with unclassified sequences representing 44% ± 1.46% (110,000 ± 3650). Bacteria belonging to the genera Serratia, Pseudomonas, Bacillus, Paenibacillus, Chromobacterium, Janthinobacterium, Burkholderia and Arthrobacter, were isolated from the sample site. All of the isolates were able to grow in a minimal growth medium, which contained glucose, ammonium chloride with basalt as the sole source of bio-essential elements. Seventy percent of the isolates significantly enhanced basalt dissolution (p < 0.05). The rate of dissolution correlated to the production of oxalic acid and acidification of the growth medium. The findings of this work suggest that at the interface between bedrock and soil heterotrophic members of the bacterial community can enhance weathering, an essential part of biogeochemical cycling in nutrient limiting soil
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