1,248 research outputs found
The semantic effects of verb raising and its consequences in second language grammars
This article considers whether highly proficient second language speakers of English can distinguish meaning contrasts associated with constructions where there is a raising be, and constructions where there is a non-raising thematic verb, as illustrated in the difference between (1a) and (1b): 1a. Kim is reading a novel (`event-in-progress/existential ? interpretation
Examination of equine glandular stomach lesions for bacteria, including Helicobacter spp by fluorescence in situ hybridisation
<p>Abstract</p> <p>Background</p> <p>The equine glandular stomach is commonly affected by erosion and ulceration. The aim of this study was to assess whether bacteria, including Helicobacter, could be involved in the aetiology of gastric glandular lesions seen in horses.</p> <p>Results</p> <p>Stomach lesions, as well as normal appearing mucosa were obtained from horses slaughtered for human consumption. All samples were tested for urease activity using the Pyloritek<sup>ÂŽ </sup>assay, while mucosal bacterial content was evaluated using Fluorescence <it>In Situ </it>Hybridisation. In selected sub samples, bacteria characterisation was pursued further by cloning and sequencing. Mucosal lesions were found in 36/63 stomachs and included hyperplastic rugae, polypoid structures and focal erosions. None of the samples were tested positive for urease activity or for FISH using the Helicobacter genus specific probe. In samples of lesions, as well as normal samples, clones with 99% similarities to <it>Lactobacillus salivarius </it>and <it>Sarcina ventriculi </it>were found. <it>Escherichia </it>like bacterium clones and Enterococcus clones were demonstrated in one focal erosion. Based on a phylogenetic tree these clones had 100% similarity to <it>Escherichia fergusonii and Enterococcus faecium</it>. The Enterococcus were found colonising the mucosal surface, while <it>E. fergusonii </it>organisms were also demonstrated intraepithelial.</p> <p>Conclusion</p> <p>Gastric Helicobacter spp. could not be verified as being involved in lesions of the glandular stomach of the horse. Since <it>E. fergusonii </it>has been described as an emerging pathogen in both humans and animals, the finding of this bacterium in gastric erosion warrants further clarification to whether gastric infection with this type bacterium is important for horses.</p
Multi-elemental speciation analysis of barley genotypes diering in tolerance to cadmium toxicity using SEC-ICP-MS and ESI-TOF-MS
Plants respond to Cd exposure by synthesizing heavy-metal-binding oligopeptides, called phytochelatins (PCs). These peptides reduce the activity of Cd2+ ions in the plant tissues by forming Cd chelates. The main objective of the present work was to develop an analytical technique, which allowed identication of the most prominent Cd species in plant tissue by SEC-ICP-MS and ESI-TOF-MS. An integrated part of the method development was to test the hypothesis that dierential Cd tolerance between two barley genotypes was linked to dierences in Cd speciation. Only one fraction of Cd species, ranging from 7001800 Da, was detected in the shoots of both genotypes. In the roots, two additional fractions ranging from 29004600 and 670015 000 Da were found. The Cd-rich SEC fractions were heart-cut, de-salted and demetallized using reversed-phase chromatography (RPC), followed by ESI-MS-TOF to identify the ligands. Three dierent families of PCs, viz. (gGlu-Cys)n-Gly (PCn), (gGlu-Cys)n-Ser (iso-PCn) and Cys-(gGlu-Cys)n-Gly (des-gGlu-PCn), the last lacking the N-terminal amino acid, were identied. The PCs induced by Cd toxicity also bound several essential trace elements in plants, including Zn, Cu, and Ni, whereas no Mn species were detected. Zn, Cu and Ni-species were distributed between the 7001800 Da and 670015 000 Da fractions, whereas only Cd species were found in the 29004600 Da fraction dominated by PC3 ligands. Although the total tissue concentration of Cd was similar for the two species, the tolerant barley genotype synthesized signicantly more CdPC3 species with a high Cd specicity than the intolerant genotype, clearly indicating a correlation between Cd tolerance and the CdPC speciation
Plant Biomarker Pattern, Apples grown with various availability of organic nitrogen and with or witout the use of pesticides
In the recent years there has been an increasing focus on the quality and health value of organic plant products compared with conventional products.
The use of pesticides and concentrated fertilisers in conventional agriculture implies a risk of effects on plant composition, which may affect health of the
consumer (Brandt & Mølgaard, 2001).
To determine if organically grown plant food could provide more or less benefits to health than conventional food, a first step is to investigate the differences
in the composition and relative concentration of natural compounds in the plant products.
In this project apples were grown with two levels of nitrogen availability and with or without the use of pesticides. The apples were screened for changes in the phytochemical composition and concentration.
The work is affiliated to the project "Organic food and health" supported by the Danish Research Centre for Organic Farming (DARCOF).
Biomarkers and biomarker patterns were presented in plants cultivated with low and high N and with pesticides.
One biomarker was related to:
⢠the type of N with and without pesticides
⢠pesticides at high N and type of N without pesticides
⢠pesticides at low and high N
One biomarker pattern was related to:
⢠the type of N
⢠the type of N without pesticides
⢠pesticides at low N and type of N without pesticides
⢠pesticides at high N and type of N with pesticide
Multi-element bioimaging of Arabidopsis thaliana roots
Better understanding of root function is central for development of plants with more efficient nutrient uptake and translocation. We here present a method for multi-element bioimaging at the cellular level in roots of the genetic model system Arabidopsis thaliana. Using conventional protocols for microscopy we observed that diffusible ions such as potassium (K+) and sodium (Na+) were lost during sample dehydration. Thus, we developed a protocol which preserves ions in their native, cellular environment. Briefly, fresh roots are encapsulated in paraffin, then cryo-sectioned and freeze dried. Samples are finally analyzed by Laser Ablation-Inductively Coupled Plasma-Mass Spectrometry (LA-ICP-MS), utilizing a specially designed internal standard procedure. The method can be further developed to maintain the native composition of proteins, enzymes, RNA and DNA, making it attractive in combination with other omics techniques. To demonstrate the potential of the method we analyzed a mutant of A. thaliana unable to synthesize the metal chelator nicotianamine (NA). The mutant accumulated substantially more zinc (Zn) and manganese (Mn) than the wild type in the tissues surrounding the vascular cylinder. For iron (Fe) the images looked completely different, with Fe bound mainly in the epidermis of the WT plants, but confined to the cortical cell walls of the mutant. The method offers the power of ICP-MS to be fully employed, thereby providing a basis for detailed studies of ion transport in roots. Being applicable to A. thaliana, the molecular and genetic approaches available in this system can now be fully exploited in order to gain a better mechanistic understanding of these processes
Micro-scaled high-throughput digestion of plant tissue samples for multi-elemental analysis
Quantitative multi-elemental analysis by inductively coupled plasma (ICP) spectrometry depends on a complete digestion of solid samples. However, fast and thorough sample digestion is a challenging analytical task which constitutes a bottleneck in modern multi-elemental analysis. Additional obstacles may be that sample quantities are limited and elemental concentrations low. In such cases, digestion in small volumes with minimum dilution and contamination is required in order to obtain high accuracy data.
Results
We have developed a micro-scaled microwave digestion procedure and optimized it for accurate elemental profiling of plant materials (1-20 mg dry weight). A commercially available 64-position rotor with 5 ml disposable glass vials, originally designed for microwave-based parallel organic synthesis, was used as a platform for the digestion. The novel micro-scaled method was successfully validated by the use of various certified reference materials (CRM) with matrices rich in starch, lipid or protein. When the micro-scaled digestion procedure was applied on single rice grains or small batches of Arabidopsis seeds (1 mg, corresponding to approximately 50 seeds), the obtained elemental profiles closely matched those obtained by conventional analysis using digestion in large volume vessels. Accumulated elemental contents derived from separate analyses of rice grain fractions (aleurone, embryo and endosperm) closely matched the total content obtained by analysis of the whole rice grain.
Conclusion
A high-throughput micro-scaled method has been developed which enables digestion of small quantities of plant samples for subsequent elemental profiling by ICP-spectrometry. The method constitutes a valuable tool for screening of mutants and transformants. In addition, the method facilitates studies of the distribution of essential trace elements between and within plant organs which is relevant for, e.g., breeding programmes aiming at improvement of the micronutrient density in edible plant parts. Compared to existing vial-in-vial systems, the new method developed here represents a significant methodological advancement in terms of higher capacity, reduced labour consumption, lower material costs, less contamination and, as a consequence, improved analytical accuracy following micro-scaled digestion of plant samples
Metabolism of ticagrelor in patients with acute coronary syndromes.
Š The Author(s) 2018Ticagrelor is a state-of-the-art antiplatelet agent used for the treatment of patients with acute coronary syndromes (ACS). Unlike remaining oral P2Y12 receptor inhibitors ticagrelor does not require metabolic activation to exert its antiplatelet action. Still, ticagrelor is extensively metabolized by hepatic CYP3A enzymes, and AR-C124910XX is its only active metabolite. A post hoc analysis of patient-level (nâ=â117) pharmacokinetic data pooled from two prospective studies was performed to identify clinical characteristics affecting the degree of AR-C124910XX formation during the first six hours after 180âmg ticagrelor loading dose in the setting of ACS. Both linear and multiple regression analyses indicated that ACS patients presenting with ST-elevation myocardial infarction or suffering from diabetes mellitus are more likely to have decreased rate of ticagrelor metabolism during the acute phase of ACS. Administration of morphine during ACS was found to negatively influence transformation of ticagrelor into AR-C124910XX when assessed with linear regression analysis, but not with multiple regression analysis. On the other hand, smoking appears to increase the degree of ticagrelor transformation in ACS patients. Mechanisms underlying our findings and their clinical significance warrant further research.Peer reviewedFinal Published versio
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