Woven Graph Codes: Asymptotic Performances and Examples

Constructions of woven graph codes based on constituent block and convolutional codes are studied. It is shown that within the random ensemble of such codes based on $s$-partite, $s$-uniform hypergraphs, where $s$ depends only on the code rate, there exist codes satisfying the Varshamov-Gilbert (VG) and the Costello lower bound on the minimum distance and the free distance, respectively. A connection between regular bipartite graphs and tailbiting codes is shown. Some examples of woven graph codes are presented. Among them an example of a rate $R_{\rm wg}=1/3$ woven graph code with $d_{\rm free}=32$ based on Heawood's bipartite graph and containing $n=7$ constituent rate $R^{c}=2/3$ convolutional codes with overall constraint lengths $\nu^{c}=5$ is given. An encoding procedure for woven graph codes with complexity proportional to the number of constituent codes and their overall constraint length $\nu^{c}$ is presented.Comment: Submitted to IEEE Trans. Inform. Theor

Enhanced Two-Channel Kondo Physics in a Quantum Box Device

We propose a design for a one-dimensional quantum box device where the charge fluctuations are described by an anisotropic two-channel Kondo model. The device consists of a quantum box in the Coulomb blockade regime, weakly coupled to a quantum wire by a single-mode point contact. The electron correlations in the wire produce strong back scattering at the contact, significantly increasing the Kondo temperature as compared to the case of non-interacting electrons. By employing boundary conformal field theory techniques we show that the differential capacitance of the box exhibits manifest two-channel Kondo scaling with temperature and gate voltage, uncontaminated by the one-dimensional electron correlations. We discuss the prospect to experimentally access the Kondo regime with this type of device.Comment: EPL style, 5 pages, 1 figure, final published versio

Corrections to scaling in entanglement entropy from boundary perturbations

We investigate the corrections to scaling of the Renyi entropies of a region of size l at the end of a semi-infinite one-dimensional system described by a conformal field theory when the corrections come from irrelevant boundary operators. The corrections from irrelevant bulk operators with scaling dimension x have been studied by Cardy and Calabrese (2010), and they found not only the expected corrections of the form l^(4-2x) but also unusual corrections that could not have been anticipated by finite-size scaling arguments alone. However, for the case of perturbations from irrelevant boundary operators we find that the only corrections that can occur to leading order are of the form l^(2-2x_b) for boundary operators with scaling dimension x_b < 3/2, and l^(-1) when x_b > 3/2. When x_b=3/2 they are of the form l^(-1)log(l). A marginally irrelevant boundary perturbation will give leading corrections going as log(l)^(-3). No unusual corrections occur when perturbing with a boundary operator.Comment: 8 pages. Minor improvements and updated references. Published versio

Systems approaches and algorithms for discovery of combinatorial therapies

Effective therapy of complex diseases requires control of highly non-linear complex networks that remain incompletely characterized. In particular, drug intervention can be seen as control of signaling in cellular networks. Identification of control parameters presents an extreme challenge due to the combinatorial explosion of control possibilities in combination therapy and to the incomplete knowledge of the systems biology of cells. In this review paper we describe the main current and proposed approaches to the design of combinatorial therapies, including the empirical methods used now by clinicians and alternative approaches suggested recently by several authors. New approaches for designing combinations arising from systems biology are described. We discuss in special detail the design of algorithms that identify optimal control parameters in cellular networks based on a quantitative characterization of control landscapes, maximizing utilization of incomplete knowledge of the state and structure of intracellular networks. The use of new technology for high-throughput measurements is key to these new approaches to combination therapy and essential for the characterization of control landscapes and implementation of the algorithms. Combinatorial optimization in medical therapy is also compared with the combinatorial optimization of engineering and materials science and similarities and differences are delineated.Comment: 25 page

The Fine-Structure of the Net-Circular Polarization in a Sunspot Penumbra

We present novel evidence for a fine structure observed in the net-circular polarization (NCP) of a sunspot penumbra based on spectropolarimetric measurements utilizing the Zeeman sensitive FeI 630.2 nm line. For the first time we detect a filamentary organized fine structure of the NCP on spatial scales that are similar to the inhomogeneities found in the penumbral flow field. We also observe an additional property of the visible NCP, a zero-crossing of the NCP in the outer parts of the center-side penumbra, which has not been recognized before. In order to interprete the observations we solve the radiative transfer equations for polarized light in a model penumbra with embedded magnetic flux tubes. We demonstrate that the observed zero-crossing of the NCP can be explained by an increased magnetic field strength inside magnetic flux tubes in the outer penumbra combined with a decreased magnetic field strength in the background field. Our results strongly support the concept of the uncombed penumbra

Searching for Voltage Graph-Based LDPC Tailbiting Codes with Large Girth

The relation between parity-check matrices of quasi-cyclic (QC) low-density parity-check (LDPC) codes and biadjacency matrices of bipartite graphs supports searching for powerful LDPC block codes. Using the principle of tailbiting, compact representations of bipartite graphs based on convolutional codes can be found. Bounds on the girth and the minimum distance of LDPC block codes constructed in such a way are discussed. Algorithms for searching iteratively for LDPC block codes with large girth and for determining their minimum distance are presented. Constructions based on all-ones matrices, Steiner Triple Systems, and QC block codes are introduced. Finally, new QC regular LDPC block codes with girth up to 24 are given.Comment: Submitted to IEEE Transactions on Information Theory in February 201

Iodine status of adolescent girls in a population changing from high to lower fish consumption

To access publisher full text version of this article. Please click on the hyperlink in Additional Links fieldObjectives:During the last decades, fish and milk consumption has decreased considerably in Iceland, especially among adolescents. As these food items are important dietary iodine (I) sources, the aim of the study was to assess the iodine status and dietary pattern of adolescent girls in a population changing from a high to lower consumption of milk and fish.Subjects/Methods:Subjects were randomly selected adolescent girls (16-20 years old, n=112). A validated Food Frequency Questionnaire (FFQ) was used to evaluate food consumption and compare it with food-based dietary guidelines for milk and dairy products (2-3 portions/day) and fish (>/=2 times/week). Urine samples were collected for measuring urinary iodine (U-I) and creatinine (Cr) and blood samples for measuring serum thyroid-stimulating hormone (TSH).Results:Milk and dairy products provided 43% and fish provided 24% of the total dietary I. More than 65% of the girls consumed fish less than twice a week, and 40% consumed less than two portions of milk and dairy products per day. The median U-I concentration was 200 mug/l and the U-I/Cr ratio 138 mug I/g Cr. High intake of milk was associated with higher urinary iodine concentration, but fish intake was not found to be directly associated with urinary iodine concentration.Conclusions:Iodine status of Icelandic adolescent girls is within the optimal range defined by the World Health Organization. It is important to monitor both iodine status and the iodine concentration of important sources of iodine, as both dietary habits and composition of food might change with time

Modulated Rashba interaction in a quantum wire: Spin and charge dynamics

It was recently shown that a spatially modulated Rashba spin-orbit coupling in a quantum wire drives a transition from a metallic to an insulating state when the wave number of the modulation becomes commensurate with the Fermi wave length of the electrons in the wire. It was suggested that the effect may be put to practical use in a future spin transistor design. In the present article we revisit the problem and present a detailed analysis of the underlying physics. First, we explore how the build-up of charge density wave correlations in the quantum wire due to the periodic gate configuration that produces the Rashba modulation influences the transition to the insulating state. The interplay between the modulations of the charge density and that of the spin-orbit coupling turns out to be quite subtle: Depending on the relative phase between the two modulations, the joint action of the Rashba interaction and charge density wave correlations may either enhance or reduce the Rashba current blockade effect. Secondly, we inquire about the role of the Dresselhaus spin-orbit coupling that is generically present in a quantum wire embedded in semiconductor heterostructure. While the Dresselhaus coupling is found to work against the current blockade of the insulating state, the effect is small in most materials. Using an effective field theory approach, we also carry out an analysis of effects from electron- electron interactions, and show how the single-particle gap in the insulating state can be extracted from the more easily accessible collective charge and spin excitation thresholds. The smallness of the single-particle gap together with the anti-phase relation between the Rashba and chemical potential modulations pose serious difficulties for realizing a Rashba-controlled current switch in an InAs-based device. Some alternative designs are discussed.Comment: 20 pages, 6 figure