Intermittent Antibiotic Treatment Accelerated the Development of Colitis in IL-10 Knockout Mice

Many epidemiological studies suggest an association between antibiotic exposure and the development of inflammatory bowel disease [IBD]. However, the majority of these studies are observational and still the question remains, “Does the specific antibiotic administration regimen play a role in the development of colitis?” This study aimed to compare the possible effects of continuous and intermittent antibiotic exposure on the development of colitis using a colitis-susceptible IL-10 knockout [IL-10–/–] mouse model

Orsay virus CP-δ adopts a novel β-bracelet structural fold and incorporates into virions as a head fiber

Fiber proteins are commonly found in eukaryotic and prokaryotic viruses, where they play important roles in mediating viral attachment and host cell entry. They typically form trimeric structures and are incorporated into virions via noncovalent interactions. Orsay virus, a small RNA virus which specifically infects the laboratory model nematod

Development of a Novel Reference Plasmid for Accurate Quantification of Genetically Modified Kefeng6 Rice DNA in Food and Feed Samples

Reference plasmids are an essential tool for the quantification of genetically modified (GM) events. Quantitative real-time PCR (qPCR) is the most commonly used method to characterize and quantify reference plasmids. However, the precision of this method is often limited by calibration curves, and qPCR data can be affected by matrix differences between the standards and samples. Here, we describe a digital PCR (dPCR) approach that can be used to accurately measure the novel reference plasmid pKefeng6 and quantify the unauthorized variety of GM rice Kefeng6, eliminating the issues associated with matrix effects in calibration curves. The pKefeng6 plasmid was used as a calibrant for the quantification of Kefeng6 rice by determining the copy numbers of event- (77 bp) and taxon-specific (68 bp) fragments, their ratios, and their concentrations. The plasmid was diluted to five different concentrations. The third sample (S3) was optimized for the quantification range of dPCR according to previous reports. The ratio between the two fragments was 1.005, which closely approximated the value certified by sequencing, and the concentration was found to be 792 copies/μL. This method was precise, with an RSD of ~3%. These findings demonstrate the advantages of using the dPCR method to characterize reference materials

Recombinase Polymerase Amplification (RPA) of CaMV-35S Promoter and nos Terminator for Rapid Detection of Genetically Modified Crops

Recombinase polymerase amplification (RPA) is a novel isothermal DNA amplification and detection technology that enables the amplification of DNA within 30 min at a constant temperature of 37–42 °C by simulating in vivo DNA recombination. In this study, based on the regulatory sequence of the cauliflower mosaic virus 35S (CaMV-35S) promoter and the Agrobacterium tumefaciens nopaline synthase gene (nos) terminator, which are widely incorporated in genetically modified (GM) crops, we designed two sets of RPA primers and established a real-time RPA detection method for GM crop screening and detection. This method could reliably detect as few as 100 copies of the target molecule in a sample within 15–25 min. Furthermore, the real-time RPA detection method was successfully used to amplify and detect DNA from samples of four major GM crops (maize, rice, cotton, and soybean). With this novel amplification method, the test time was significantly shortened and the reaction process was simplified; thus, this method represents an effective approach to the rapid detection of GM crops

Formation and destruction mechanism as well as major controlling factors of the Silurian shale gas overpressure in the Sichuan Basin, China

Taking the Well JY1 and Well PY1 in the Eastern Sichuan Basin as examples, the formation mechanism of shale gas overpressure was studied by using the cross plot of acoustic versus density logging data. During the processes of hydrocarbon generation and the uplifting, the pressure evolution of fluids in shale gas layers was reconstructed by fluid inclusions and PVTSIM software. The major factors controlling the evolution of shale gas overpressure were established according to the study of fracture, the timing of the uplifting, and episodes of tectonic deformation. Our results showed that the main mechanism of overpressure in the Silurian shale gas reservoirs in the Sichuan Basin was the fluid expansion, which was caused by hydrocarbon generation. Since the Yanshanian, the strata were uplifted and fluid pressure generally showed a decreasing trend. However, due to the low compression rebound ratio of shale gas reservoir rocks, poor connectivity of reservoir rocks, and low content of formation water and so on, such factors made fluid pressure decrease, but these would not be enough to make up the effects of strata erosion resulting in a further increase in fluid pressure in shale gas reservoirs during the whole uplifting processes. Since the Yanshanian, the Well PY1 zone had been reconstructed by at least three episodes of tectonic movement. The initial timing of the uplifting is 130 Ma. Compared to the former, the Well JY1 zone was firstly uplifted at 90 Ma, which was weakly reconstructed. As a result, low-angle fractures and few high resistance fractures developed in the Well JY1, while high-angle fractures and many high resistance fractures developed in the Well PY1. In totality, the factors controlling the overpressure preservation in shale gas reservoirs during the late periods include timing of late uplifting, superposition and reconstruction of stress fields, and development of high-angle fractures

A Novel Reference Plasmid for the Qualitative Detection of Genetically Modified Rice in Food and Feed

Rice is one of the most important food crops in the world. Genetically modified (GM) technology has been used in rice to confer herbicide tolerance and pathogen or insect resistance. China invests heavily in research on GM rice. By the end of 2014, at least 250 transgenic rice lines had been developed in China. To monitor the presence of GM rice in food and feed, we collected information on foreign elements from 250 transgenic rice lines and found 5 elements, including the Agrobacterium tumefaciens nopaline synthase terminator (T-NOS), the cauliflower mosaic virus 35S promoter (CaMV35S), the ubiquitin gene (Ubi), the bar gene, and the hygromycin phosphotransferase gene (Hpt), that are commonly present in GM rice. Therefore, we constructed a novel plasmid (pBJGMM001) that contains fragments of these elements and two endogenous reference genes (the sucrose phosphate synthase gene, SPS, and the phosphoenolpyruvate carboxylase gene, PEPC). pBJGMM001 can serve as a standard for detecting 96% of GM rice lines in China. The primers, amplicons, reaction mixture, and PCR program were developed based on Chinese National Standards. The protocol was validated and determined to be suitable for practical use in monitoring and identifying GM rice

A Novel Reference Plasmid for the Qualitative Detection of Genetically Modified Rice in Food and Feed

Rice is one of the most important food crops in the world. Genetically modified (GM) technology has been used in rice to confer herbicide tolerance and pathogen or insect resistance. China invests heavily in research on GM rice. By the end of 2014, at least 250 transgenic rice lines had been developed in China. To monitor the presence of GM rice in food and feed, we collected information on foreign elements from 250 transgenic rice lines and found 5 elements, including the Agrobacterium tumefaciens nopaline synthase terminator (T-NOS), the cauliflower mosaic virus 35S promoter (CaMV35S), the ubiquitin gene (Ubi), the bar gene, and the hygromycin phosphotransferase gene (Hpt), that are commonly present in GM rice. Therefore, we constructed a novel plasmid (pBJGMM001) that contains fragments of these elements and two endogenous reference genes (the sucrose phosphate synthase gene, SPS, and the phosphoenolpyruvate carboxylase gene, PEPC). pBJGMM001 can serve as a standard for detecting 96% of GM rice lines in China. The primers, amplicons, reaction mixture, and PCR program were developed based on Chinese National Standards. The protocol was validated and determined to be suitable for practical use in monitoring and identifying GM rice

Versatile asymmetric separator with dendrite-free alloy anode enables high-performance Li-S batteries

Lithium-sulfur batteries (LSBs) with extremely-high theoretical energy density (2600 Wh kg-1 ) are deemed to be the most likely energy storage system to be commercialized. However, the polysulfides shuttling and lithium (Li) metal anode failure in LSBs limit its further commercialization. Herein, a versatile asymmetric separator and a Li-rich lithium-magnesium (Li-Mg) alloy anode are applied in LSBs. The asymmetric separator is consisted of lithiated-sulfonated porous organic polymer (SPOP-Li) and Li6.75 La3 Zr1.75 Nb0.25 O12 (LLZNO) layers toward the cathode and anode, respectively. SPOP-Li serves as a polysulfides barrier and Li-ion conductor, while the LLZNO functions as an "ion redistributor". Combining with a stable Li-Mg alloy anode, the symmetric cell achieves 5300 h of Li stripping/plating and the modified LSBs exhibit a long lifespan with an ultralow fading rate of 0.03% per cycle for over 1000 cycles at 5 C. Impressively, even under a high-sulfur-loading (6.1 mg cm-2 ), an area capacity of 4.34 mAh cm-2 after 100 cycles can still be maintained, demonstrating high potential for practical application.Published versionThe authors gratefully acknowledge the financial support from National Key R & D Program of China (2021YFB2400400), the National Natural Science Foundation Committee of China (Key Project of 52131306, 52073143, Distinguished Youth Scientists Project of 51425301), State Key Lab Research Foundation (ZK201805, ZK201717), the Natural Science Foundation of Jiangsu Province (No. BK20200696, No. BK20200768, and No. 20KJB430019) and Postgraduate Research & Practice Innovation Program of Jiangsu Province (KYCX20_1072)