Some chemical and mineralogical aspects of plutonic rocks from the North Arm Mountain Massif, Bay Of Islands Ophiolite, Newfoundland

Whole-rock major and trace element compositions of one basalt, one diabase, and 21 rocks from the magmatic-plutonic units of the North Arm Mountain massif, Bay of Islands ophiolite, Newfoundland, were determined. Mineral compositions of a subset of the plutonic rocks were also determined. The major and trace element compositions of the basalt and diabase are similar to abyssal tholeiites, and this is consistent with the REE data of Malpas (1978) and Suen, et. al. (1979) that suggest the lavas and dikes formed from a depleted or slightly enriched abyssal tholeiitic magma. The alkaline nature of the magma proposed by several previous investigators based on major element chemistry is attributed to alteration. The major primary minerals of the plutonic rocks are approximately in chemical equilibrium with each other, and mineral zoning, where present, is normal. This indicates that the plutonic rocks formed mainly by in situ nucleation and crystallization on or near the margins of the magma chamber rather than by homogeneous nucleation and gravitational sorting. Methods of estimating the amount of trapped liquid in plutonic rocks from incompatible trace element concentrations are discussed. Textures and estimates of trapped liquid indicate many of the plutonic rocks from the area of North Arm Mountain from where the rocks in this study were collected are mesocumulates. This and the thinning of the layered units and thickening of the isotropic gabbros suggest the plutonic rocks in this area formed under conditions of faster cooling than did those to the northeast and southwest. Whole-rock and cryptic mineral variations with pseudo-stratigraphic height suggest the magma chamber was vertically zoned, with. the degree of differentiation increasing upward, but that the extent of fractionation was rather limited. Olivine Fo, plagioclase Ca#, and clinopyroxene Mg# varied by 9, 17, and 13 units, respectively, through a vertical distance of 6 km. through the transition zone and gabbroic units. Mineral compositions determined in this study and others and the gross lithologic layering suggest the general crystallization order of the North Arm parent magma was olivine (± chromite) - clinopyroxene - plagioclase - orthopyroxene. This is inconsistent with phase relations of abyssal tholeiites in which clinopyroxene crystallizes after olivine and plagioclase. No explanation is suggested. Most chemical and mineralogic features of North Arm Mountain plutonic rocks can be attributed to a combination of crystal fractionation and repeated mixing of newly injected parent magma in a large, steady-state chamber at an oceanic spreading center. This is consistent with the geologic evidence (Casey, 1980). However, other processes must be responsible for some of the minor variant mineral assemblages in the plutonic rocks

Dark sectors 2016 Workshop: community report

This report, based on the Dark Sectors workshop at SLAC in April 2016, summarizes the scientific importance of searches for dark sector dark matter and forces at masses beneath the weak-scale, the status of this broad international field, the important milestones motivating future exploration, and promising experimental opportunities to reach these milestones over the next 5-10 years

HIV Antigen Incorporation within Adenovirus Hexon Hypervariable 2 for a Novel HIV Vaccine Approach

Adenoviral (Ad) vectors have been used for a variety of vaccine applications including cancer and infectious diseases. Traditionally, Ad-based vaccines are designed to express antigens through transgene expression of a given antigen. However, in some cases these conventional Ad-based vaccines have had sub-optimal clinical results. These sub-optimal results are attributed in part to pre-existing Ad serotype 5 (Ad5) immunity. In order to circumvent the need for antigen expression via transgene incorporation, the “antigen capsid-incorporation” strategy has been developed and used for Ad-based vaccine development in the context of a few diseases. This strategy embodies the incorporation of antigenic peptides within the capsid structure of viral vectors. The major capsid protein hexon has been utilized for these capsid incorporation strategies due to hexon's natural role in the generation of anti-Ad immune response and its numerical representation within the Ad virion. Using this strategy, we have developed the means to incorporate heterologous peptide epitopes specifically within the major surface-exposed domains of the Ad capsid protein hexon. Our study herein focuses on generation of multivalent vaccine vectors presenting HIV antigens within the Ad capsid protein hexon, as well as expressing an HIV antigen as a transgene. These novel vectors utilize HVR2 as an incorporation site for a twenty-four amino acid region of the HIV membrane proximal ectodomain region (MPER), derived from HIV glycoprotein gp41 (gp41). Our study herein illustrates that our multivalent anti-HIV vectors elicit a cellular anti-HIV response. Furthermore, vaccinations with these vectors, which present HIV antigens at HVR2, elicit a HIV epitope-specific humoral immune response

Loss of PTB or Negative Regulation of Notch mRNA Reveals Distinct Zones of Notch and Actin Protein Accumulation in Drosophila Embryo

Polypyrimidine Tract Binding (PTB) protein is a regulator of mRNA processing and translation. Genetic screens and studies of wing and bristle development during the post-embryonic stages of Drosophila suggest that it is a negative regulator of the Notch pathway. How PTB regulates the Notch pathway is unknown. Our studies of Drosophila embryogenesis indicate that (1) the Notch mRNA is a potential target of PTB, (2) PTB and Notch functions in the dorso-lateral regions of the Drosophila embryo are linked to actin regulation but not their functions in the ventral region, and (3) the actin-related Notch activity in the dorso-lateral regions might require a Notch activity at or near the cell surface that is different from the nuclear Notch activity involved in cell fate specification in the ventral region. These data raise the possibility that the Drosophila embryo is divided into zones of different PTB and Notch activities based on whether or not they are linked to actin regulation. They also provide clues to the almost forgotten role of Notch in cell adhesion and reveal a role for the Notch pathway in cell fusions

Meta-analyses of genome-wide association studies for postpartum depression

Objective: Postpartum depression (PPD) is a common subtype of major depressive disorder (MDD) that is more heritable, yet is understudied in psychiatric genetics. The authors conducted meta-analyses of genome-wide association studies (GWASs) to investigate the genetic architecture of PPD. Method: Meta-analyses were conducted on 18 cohorts of European ancestry (17,339 PPD cases and 53,426 controls), one cohort of East Asian ancestry (975 cases and 3,780 controls), and one cohort of African ancestry (456 cases and 1,255 controls), totaling 18,770 PPD cases and 58,461 controls. Post-GWAS analyses included 1) single-nucleotide polymorphism (SNP)–based heritability (), 2) genetic correlations between PPD and other phenotypes, and 3) enrichment of the PPD GWAS findings in 27 human tissues and 265 cell types from the mouse central and peripheral nervous system. Results: No SNP achieved genome-wide significance in the European or the trans-ancestry meta-analyses. The of PPD was 0.14 (SE=0.02). Significant genetic correlations were estimated for PPD with MDD, bipolar disorder, anxiety disorders, posttraumatic stress disorder, insomnia, age at menarche, and polycystic ovary syndrome. Cell-type enrichment analyses implicate inhibitory neurons in the thalamus and cholinergic neurons within septal nuclei of the hypothalamus, a pattern that differs from MDD. Conclusions: While more samples are needed to reach genome-wide levels of significance, the results presented confirm PPD as a polygenic and heritable phenotype. There is also evidence that despite a high correlation with MDD, PPD may have unique genetic components. Cell enrichment results suggest GABAergic neurons, which converge on a common mechanism with the only medication approved by the U.S. Food and Drug Administration for PPD (brexanolone)

Global Assessment of Hydrogen Technologies – Tasks 3 & 4 Report Economic, Energy, and Environmental Analysis of Hydrogen Production and Delivery Options in Select Alabama Markets: Preliminary Case Studies

This report documents a set of case studies developed to estimate the cost of producing, storing, delivering, and dispensing hydrogen for light-duty vehicles for several scenarios involving metropolitan areas in Alabama. While the majority of the scenarios focused on centralized hydrogen production and pipeline delivery, alternative delivery modes were also examined. Although Alabama was used as the case study for this analysis, the results provide insights into the unique requirements for deploying hydrogen infrastructure in smaller urban and rural environments that lie outside the DOE’s high priority hydrogen deployment regions. Hydrogen production costs were estimated for three technologies – steam-methane reforming (SMR), coal gasification, and thermochemical water-splitting using advanced nuclear reactors. In all cases examined, SMR has the lowest production cost for the demands associated with metropolitan areas in Alabama. Although other production options may be less costly for larger hydrogen markets, these were not examined within the context of the case studies