Generating and evaluating a novel genetic resource in wheat in diverse environments

The principal objective of the project is to develop composite cross populations of wheat based on a wide range of key parent varieties. The parents will be selected partly on past knowledge of successful performance in terms of yield, quality and disease resistance and partly on the basis of molecular ancestry to try to ensure as wide range of diversity as possible. Following parental inter-crossing in all possible combinations, progeny population samples will be exposed to a range of widely different agricultural environments and systems through several seasons of, largely, natural selection. Performance of the population samples will be compared at different stages against both the parents grown as pure stands and as physical mixtures. Our objective is to increase the sustainability and competitiveness of organic and other extensive farming systems by developing genetically diverse wheat populations that will respond rapidly to on-farm selection for improved productivity and yield. It is well established that modern varieties of wheat perform poorly under the conditions and management options encountered in organic farming systems. This is due to a number of factors including poor competition against weeds, narrow resistance against pests and disease, inability to efficiently utilise soil bound nutrients and the lack of genetic flexibility to buffer against environmental variation. To develop a conventional, new wheat breeding programme, from start to release of adapted varieties, would take many years. The approach we propose can deliver this material quickly. This will be achieved through the production of appropriate composite-cross populations of winter wheat. The research will provide material adapted to basic organic conditions that can then be further selected on-farm. This will also be of benefit to non-organic farms as the populations will posses broad resistance to pests and disease and improved competitive ability against weeds, so minimising the need for crop protection inputs. The research will deliver a unique insight into the evolution of genetically diverse wheat populations, under a diverse range of environments, which will allow the elucidation of gene x environment interactions. In addition, it will provide information on the characters of winter wheat that confer improved productivity under a diversity of environmental conditions. Samples of the resulting winter wheat composite cross populations will be placed in the gene bank at the John Innes Centre. Overall objective: To increase the sustainability and competitiveness of both non-organic and organic farming systems by developing genetically diverse wheat populations that will respond rapidly to on-farm selection for improved productivity and yield. 1. To generate six distinct, highly heterogeneous composite-cross populations of winter wheat for further development and selection. The populations will comprise; one with parental material selected for good milling potential, one with parents selected for high yield potential and one comprising both sets of parent material. Each of these populations will then be split to either include or exclude heritable male sterility. 2. To evaluate the performance and evolution of composite-cross populations over time under a diverse range of environmental conditions and identify characteristics that confer improved productivity in these environments. 3. To track the genetic changes that accompany selection, so providing a better understanding of the assemblages of traits that underlie improved productivity in diverse environments. 4. To provide genetically diverse crop material for further selection by farmers and as a resource for future publicly funded research. 5. To disseminate the results to the scientific community and industr

Understanding Physical Conditions in High Redshift Galaxies through C I Fine Structure Lines: Data and Methodology

We probe the physical conditions in high redshift galaxies, specifically, the Damped Lyman-alpha Systems (DLAs) using neutral carbon (CI) fine structure lines and molecular hydrogen (H2). We report five new detections of CI and analyze the CI in an additional 2 DLAs with previously published data. We also present one new detection of H2 in a DLA. We present a new method of analysis that simultaneously constrains \emph{both} the volume density and the temperature of the gas, as opposed to previous studies that a priori assumed a gas temperature. We use only the column density of CI measured in the fine structure states and the assumption of ionization equilibrium in order to constrain the physical conditions in the gas. We present a sample of 11 CI velocity components in 6 DLAs and compare their properties to those derived by the global CII* technique. The resulting median values for this sample are: = 69 cm^{-3}, = 50 K, and = 3.86 cm^{-3} K, with standard deviations, sigma_{n(HI)} = 134 cm^{-3}, sigma_T = 52 K, and sigma_{log(P/k)} = 3.68 cm^{-3} K. This can be compared with the integrated median values for the same DLAs : = 2.8 cm^{-3}, = 139 K, and = 2.57 cm^{-3} K, with standard deviations sigma_{n(HI)} = 3.0 cm^{-3}, sigma_T = 43 K, and sigma_{log(P/k)} = 0.22 cm^{-3} K. Interestingly, the pressures measured in these high redshift CI clouds are similar to those found in the Milky Way. We conclude that the CI gas is tracing a higher-density, higher-pressure region, possibly indicative of post-shock gas or a photodissociation region on the edge of a molecular cloud. We speculate that these clouds may be direct probes of the precursor sites of star formation in normal galaxies at high redshift.Comment: Accepted for publication in Ap

Experimental Studies of NaCs

We present experimental studies of excited electronic states of the NaCs molecule that are currently underway in our laboratory. The optical-optical double resonance method is used to obtain Doppler-free excitation spectra for several excited states. These data are being used to obtain RydbergKlein-Rees (RKR) or Inverse Perturbation Approach (IPA) potential curves for these states. We are also trying to map the bound portion of the 1(a) 3Σ + potential using resolved laser-induced fluorescence and Fourier transform spectroscopy to record transitions into the shallow well. Bound-free spectra from single ro-vibrational levels of electronically excited states to the repulsive wall of the 1(a) 3Σ + state are also being recorded. Using the previously determined excited state potentials, we can fit the repulsive wall of the 1(a) 3Σ + state to reproduce the experimental spectra using LeRoy’s BCONT program. A slightly modified version of BCONT will also be used to fit the relative transition dipole moments, µe(R), as a function of internuclear separation R, for the various bound-free electronic transitions

Time to guide: evidence for delayed attentional guidance in contextual cueing

Contextual cueing experiments show that, when displays are repeated, reaction times (RTs) to find a target decrease over time even when the observers are not aware of the repetition. Recent evidence suggests that this benefit in standard contextual cueing tasks is not likely to be due to an improvement in attentional guidance (Kunar, Flusberg, Horowitz, & Wolfe, 2007). Nevertheless, we ask whether guidance can help participants find the target in a repeated display, if they are given sufficient time to encode the display. In Experiment 1 we increased the display complexity so that it took participants longer to find the target. Here we found a larger effect of guidance than in a condition with shorter RTs. Experiment 2 gave participants prior exposure to the display context. The data again showed that with more time participants could implement guidance to help find the target, provided that there was something in the search stimuli locations to guide attention to. The data suggest that, although the benefit in a standard contextual cueing task is unlikely to be a result of guidance, guidance can play a role if it is given time to develop

Collisional Transfer of Population and Orientation in NaK

We report current work to study transfer of population and orientation in collisions of NaK molecules with argon and potassium atoms using polarization labeling (PL) and laser- induced fluorescence (LIF) spectroscopy. In the PL experiment, a circularly polarized pump laser excites a specific NaK A1Σ +(v 0=16, J 0 ) ← X1Σ +(v 00=0, J 0 ± 1) transition, creating an orientation (non-uniform MJ0 level distribution) in both levels. The linearly polarized probe laser is scanned over various 31Π(v, J 0±1) ← A1Σ +(v 0=16, J 0 ) transitions. The probe laser passes through a crossed linear polarizer before detection, and signal is recorded if the probe laser polarization has been modified by the vapor (which occurs when it comes into resonance with an oriented level). Using both spectroscopic methods, analysis of weak collisional satellite lines adjacent to these directly populated lines, as a function of argon buffer gas pressure and cell temperature, allows us to discern separately the effects collisions with argon atoms and potassium atoms have on the population and orientation of the molecule. In addition, code has been written which provides a theoretical analysis of the process, through a solution of the density matrix equations of motion for the system

Polarization Spectroscopy and Collisions in NaK

We report current work to study transfer of population and orientation in collisions of NaK molecules with argon and potassium atoms using polarization labeling (PL) and laser-induced fluorescence (LIF) spectroscopy. In the PL experiment, a circularly polarized pump laser excites a specific NaK A1Σ +(v=16, J) ← X1Σ +(v=0, J ± 1) transition, creating an orientation (non-uniform MJ level distribution) in both levels. The linear polarized probe laser is scanned over various 3 1Π(v=8, J 0 ± 1) ← A1Σ +(v=16, J 0 ) transitions. The probe laser passes through a crossed linear polarizer before detection, and signal is recorded if the probe laser polarization has been modified by the vapor (which occurs when it comes into resonance with an oriented level). In addition to strong direct transitions (J 0 = J), we also observe weak collisional satellite lines (J 0 = J ±n with n = 1, 2, 3, ...) indicating that orientation is transferred to adjacent rotational levels during a collision. An LIF experiment (with linear polarized pump and probe beams) gives information on the collisional transfer of population. From these data, cross sections for both processes can be determined. We experimentally distinguish collisions of NaK with argon atoms from collisions with alkali atoms