3 research outputs found
Efficient brain age prediction from 3D MRI volumes using 2D projections
Using 3D CNNs on high resolution medical volumes is very computationally
demanding, especially for large datasets like the UK Biobank which aims to scan
100,000 subjects. Here we demonstrate that using 2D CNNs on a few 2D
projections (representing mean and standard deviation across axial, sagittal
and coronal slices) of the 3D volumes leads to reasonable test accuracy when
predicting the age from brain volumes. Using our approach, one training epoch
with 20,324 subjects takes 20 - 50 seconds using a single GPU, which two orders
of magnitude faster compared to a small 3D CNN. These results are important for
researchers who do not have access to expensive GPU hardware for 3D CNNs
The next-generation ARC middleware
The Advanced Resource Connector (ARC) is a light-weight, non-intrusive, simple yet powerful Grid middleware capable of connecting highly heterogeneous computing and storage resources. ARC aims at providing general purpose, flexible, collaborative computing environments suitable for a range of uses, both in science and business. The server side offers the fundamental job execution management, information and data capabilities required for a Grid. Users are provided with an easy to install and use client which provides a basic toolbox for job- and data management. The KnowARC project developed the next-generation ARC middleware, implemented as Web Services with the aim of standard-compliant interoperability