Determining the HI content of galaxies via intensity mapping cross-correlations

We propose an innovative method for measuring the neutral hydrogen (HI) content of an optically-selected spectroscopic sample of galaxies through cross-correlation with HI intensity mapping measurements. We show that the HI-galaxy cross-power spectrum contains an additive shot noise term which scales with the average HI brightness temperature of the optically-selected galaxies, allowing constraints to be placed on the average HI mass per galaxy. This approach can estimate the HI content of populations too faint to directly observe through their 21cm emission over a wide range of redshifts. This cross-correlation, as a function of optical luminosity or colour, can be used to derive HI-scaling relations. We demonstrate that this signal will be detectable by cross-correlating upcoming Australian SKA Pathfinder (ASKAP) observations with existing optically-selected samples. We also use semi-analytic simulations to verify that the HI mass can be successfully recovered by our technique in the range M_HI > 10^8 M_solar, in a manner independent of the underlying power spectrum shape. We conclude that this method is a powerful tool to study galaxy evolution, which only requires a single intensity mapping dataset to infer complementary HI gas information from existing optical and infra-red observations.Comment: 8 pages, 4 figures, submitted to MNRA

Intensity mapping cross-correlations II: HI halo models including shot noise

HI intensity mapping data traces the large-scale structure matter distribution using the integrated emission of neutral hydrogen gas (HI). The cross-correlation of the intensity maps with optical galaxy surveys can mitigate foreground and systematic effects, but has been shown to significantly depend on galaxy evolution parameters of the HI and the optical sample. Previously, we have shown that the shot noise of the cross-correlation scales with the HI content of the optical samples, such that the shot noise estimation infers the average HI masses of these samples. In this article, we present an adaptive framework for the cross-correlation of HI intensity maps with galaxy samples using our implementation of the halo model formalism (Murray et al 2018, in prep) which utilises the halo occupation distribution of galaxies to predict their power spectra. We compare two HI population models, tracing the spatial halo and the galaxy distribution respectively, and present their auto- and cross-power spectra with an associated galaxy sample. We find that the choice of the HI model and the distribution of the HI within the galaxy sample have minor significance for the shape of the auto- and cross-correlations, but highly impact the measured shot noise amplitude of the estimators, a finding we confirm with simulations. We demonstrate parameter estimation of the HI halo occupation models and advocate this framework for the interpretation of future experimental data, with the prospect of determining the HI masses of optical galaxy samples via the cross-correlation shot noise.Comment: 15 pages, 8 figures, 3 tables. Comments welcom

Hydrologic impacts of an alternative agricultural land use: a woody perennial polyculture

U.S. Department of the InteriorU.S. Geological SurveyOpe

Frontiers in alley cropping: Transformative solutions for temperate agriculture

Annual row crop systems dominate agriculture around the world and have considerable negative environmental impacts. Incremental improvements to the prevailing system have been the primary focus of efforts to reduce these negative impacts, though are likely insufficient in solving the ecological challenges of row crop agriculture. This dissertation explores alley cropping (AC) – an agroforestry practice integrating trees with crops – as a transformative land-use solution to mitigate climate change, restore ecosystem services, and improve agricultural profitability. Through an inventory of all field experiments of AC to date, I identify several major gaps in AC research. In particular, AC has held a narrow focus on systems that integrate only one timber tree species with one annual grain species. I explore broadening this focus and identify key considerations for the scalable implementation of woody polycultures and tree crops for food and fodder. To evaluate the direct benefits of such systems, I then assess the potential of diversified, food-producing AC to mitigate unintended nitrogen losses in a side-by-side field experiment with row crop agriculture. I show that transitioning to AC can rapidly tighten the nitrogen cycle even during establishment years. Finally, I evaluate the economic competitiveness of the most common temperate AC system – black walnut trees for timber with annual grain alley crops – against the widespread maize-soybean rotation. Even without monetization of environmental benefits, I demonstrate that AC can improve landowner profitability across a substantial portion of the Midwest US. By exploring the frontiers in temperate AC, this dissertation highlights a multifunctional, transformative land-use alternative for temperate agriculture

Enrichment of clinical trials in MCI due to AD using markers of amyloid and neurodegeneration

Objective: To investigate the effect of enriching mild cognitive impairment (MCI) clinical trials using combined markers of amyloid pathology and neurodegeneration. Methods: We evaluate an implementation of the recent National Institute for Aging–Alzheimer's Association (NIA-AA) diagnostic criteria for MCI due to Alzheimer disease (AD) as inclusion criteria in clinical trials and assess the effect of enrichment with amyloid (A+), neurodegeneration (N+), and their combination (A+N+) on the rate of clinical progression, required sample sizes, and estimates of trial time and cost. Results: Enrichment based on an individual marker (A+ or N+) substantially improves all assessed trial characteristics. Combined enrichment (A+N+) further improves these results with a reduction in required sample sizes by 45% to 60%, depending on the endpoint. Conclusions: Operationalizing the NIA-AA diagnostic criteria for clinical trial screening has the potential to substantially improve the statistical power of trials in MCI due to AD by identifying a more rapidly progressing patient population

Shift-Symmetric Configurations in Two-Dimensional Cellular Automata: Irreversibility, Insolvability, and Enumeration

The search for symmetry as an unusual yet profoundly appealing phenomenon, and the origin of regular, repeating configuration patterns have long been a central focus of complexity science and physics. To better grasp and understand symmetry of configurations in decentralized toroidal architectures, we employ group-theoretic methods, which allow us to identify and enumerate these inputs, and argue about irreversible system behaviors with undesired effects on many computational problems. The concept of so-called configuration shift-symmetry is applied to two-dimensional cellular automata as an ideal model of computation. Regardless of the transition function, the results show the universal insolvability of crucial distributed tasks, such as leader election, pattern recognition, hashing, and encryption. By using compact enumeration formulas and bounding the number of shift-symmetric configurations for a given lattice size, we efficiently calculate the probability of a configuration being shift-symmetric for a uniform or density-uniform distribution. Further, we devise an algorithm detecting the presence of shift-symmetry in a configuration. Given the resource constraints, the enumeration and probability formulas can directly help to lower the minimal expected error and provide recommendations for system's size and initialization. Besides cellular automata, the shift-symmetry analysis can be used to study the non-linear behavior in various synchronous rule-based systems that include inference engines, Boolean networks, neural networks, and systolic arrays.Comment: 22 pages, 9 figures, 2 appendice

Lack of clustering in low-redshift 21-cm intensity maps cross-correlated with 2dF galaxy densities

We report results from 21-cm intensity maps acquired from the Parkes radio telescope and cross-correlated with galaxy maps from the 2dF galaxy survey. The data span the redshift range $0.057<z<0.098$ and cover approximately 1,300 square degrees over two long fields. Cross correlation is detected at a significance of $5.18\sigma$. The amplitude of the cross-power spectrum is low relative to the expected dark matter power spectrum, assuming a neutral hydrogen (HI) bias and mass density equal to measurements from the ALFALFA survey. The decrement is pronounced and statistically significant at small scales. At $k\sim1.5$ $h \mathrm{Mpc^{-1}}$, the cross power spectrum is more than a factor of 6 lower than expected, with a significance of $14.8\,\sigma$. This decrement indicates either a lack of clustering of neutral hydrogen (HI), a small correlation coefficient between optical galaxies and HI, or some combination of the two. Separating 2dF into red and blue galaxies, we find that red galaxies are much more weakly correlated with HI on $k\sim1.5$ $h \mathrm{Mpc^{-1}}$ scales, suggesting that HI is more associated with blue star-forming galaxies and tends to avoid red galaxies.Comment: 12 pages, 3 figures; fixed typo in meta-data title and paper author

Carbohydrate and protein contents of grain dusts in relation to dust morphology.

Grain dusts contain a variety of materials which are potentially hazardous to the health of workers in the grain industry. Because the characterization of grain dusts is incomplete, we are defining the botanical, chemical, and microbial contents of several grain dusts collected from grain elevators in the Duluth-Superior regions of the U.S. Here, we report certain of the carbohydrate and protein contents of dusts in relation to dust morphology. Examination of the gross morphologies of the dusts revealed that, except for corn, each dust contained either husk or pericarp (seed coat in the case of flax) fragments in addition to respirable particles. When viewed with the light microscope, the fragments appeared as elongated, pointed structures. The possibility that certain of the fragments within corn, settled, and spring wheat were derived from cell walls was suggested by the detection of pentoses following colorimetric assay of neutralized 2 N trifluoroacetic acid hydrolyzates of these dusts. The presence of pentoses together with the occurrence of proteins within water washings of grain dusts suggests that glycoproteins may be present within the dusts. With scanning electron microscopy, each dust was found to consist of a distinct assortment of particles in addition to respirable particles. Small husk fragments and "trichome-like" objects were common to all but corn dust