267 research outputs found
Ultra-Slow Vacancy-Mediated Tracer Diffusion in Two Dimensions: The Einstein Relation Verified
We study the dynamics of a charged tracer particle (TP) on a two-dimensional
lattice all sites of which except one (a vacancy) are filled with identical
neutral, hard-core particles. The particles move randomly by exchanging their
positions with the vacancy, subject to the hard-core exclusion. In case when
the charged TP experiences a bias due to external electric field ,
(which favors its jumps in the preferential direction), we determine exactly
the limiting probability distribution of the TP position in terms of
appropriate scaling variables and the leading large-N ( being the discrete
time) behavior of the TP mean displacement ; the latter is
shown to obey an anomalous, logarithmic law . On comparing our results with earlier predictions by Brummelhuis
and Hilhorst (J. Stat. Phys. {\bf 53}, 249 (1988)) for the TP diffusivity
in the unbiased case, we infer that the Einstein relation
between the TP diffusivity and the mobility holds in the leading in order, despite
the fact that both and are not constant but vanish as . We also generalize our approach to the situation with very small but
finite vacancy concentration , in which case we find a ballistic-type law
. We demonstrate that here,
again, both and , calculated in the linear in
approximation, do obey the Einstein relation.Comment: 25 pages, one figure, TeX, submitted to J. Stat. Phy
Kinetics of active surface-mediated diffusion in spherically symmetric domains
We present an exact calculation of the mean first-passage time to a target on
the surface of a 2D or 3D spherical domain, for a molecule alternating phases
of surface diffusion on the domain boundary and phases of bulk diffusion. We
generalize the results of [J. Stat. Phys. {\bf 142}, 657 (2011)] and consider a
biased diffusion in a general annulus with an arbitrary number of regularly
spaced targets on a partially reflecting surface. The presented approach is
based on an integral equation which can be solved analytically. Numerically
validated approximation schemes, which provide more tractable expressions of
the mean first-passage time are also proposed. In the framework of this minimal
model of surface-mediated reactions, we show analytically that the mean
reaction time can be minimized as a function of the desorption rate from the
surface.Comment: Published online in J. Stat. Phy
Mean first-passage times of non-Markovian random walkers in confinement
The first-passage time (FPT), defined as the time a random walker takes to
reach a target point in a confining domain, is a key quantity in the theory of
stochastic processes. Its importance comes from its crucial role to quantify
the efficiency of processes as varied as diffusion-limited reactions, target
search processes or spreading of diseases. Most methods to determine the FPT
properties in confined domains have been limited to Markovian (memoryless)
processes. However, as soon as the random walker interacts with its
environment, memory effects can not be neglected. Examples of non Markovian
dynamics include single-file diffusion in narrow channels or the motion of a
tracer particle either attached to a polymeric chain or diffusing in simple or
complex fluids such as nematics \cite{turiv2013effect}, dense soft colloids or
viscoelastic solution. Here, we introduce an analytical approach to calculate,
in the limit of a large confining volume, the mean FPT of a Gaussian
non-Markovian random walker to a target point. The non-Markovian features of
the dynamics are encompassed by determining the statistical properties of the
trajectory of the random walker in the future of the first-passage event, which
are shown to govern the FPT kinetics.This analysis is applicable to a broad
range of stochastic processes, possibly correlated at long-times. Our
theoretical predictions are confirmed by numerical simulations for several
examples of non-Markovian processes including the emblematic case of the
Fractional Brownian Motion in one or higher dimensions. These results show, on
the basis of Gaussian processes, the importance of memory effects in
first-passage statistics of non-Markovian random walkers in confinement.Comment: Submitted version. Supplementary Information can be found on the
Nature website :
http://www.nature.com/nature/journal/v534/n7607/full/nature18272.htm
Microscopic Model of Charge Carrier Transfer in Complex Media
We present a microscopic model of a charge carrier transfer under an action
of a constant electric field in a complex medium. Generalizing previous
theoretical approaches, we model the dynamical environment hindering the
carrier motion by dynamic percolation, i.e., as a medium comprising particles
which move randomly on a simple cubic lattice, constrained by hard-core
exclusion, and may spontaneously annihilate and re-appear at some prescribed
rates. We determine analytically the density profiles of the "environment"
particles, as seen from the stationary moving charge carrier, and calculate its
terminal velocity as the function of the applied field and other system
parameters. We realize that for sufficiently small external fields the force
exerted on the carrier by the "environment" particles shows a viscous-like
behavior and define an analog of the Stokes formula for such dynamic
percolative environments. The corresponding friction coefficient is also
derived.Comment: appearing in Chem. Phys. Special Issue on Molecular Charge Transfer
in Condensed Media - from Physics and Chemistry to Biology and
Nano-Engineering, edited by A.Kornyshev (Imperial College London), M.Newton
(Brookhaven Natl Lab) and J.Ulstrup (Technical University of Denmark
Windings of the 2D free Rouse chain
We study long time dynamical properties of a chain of harmonically bound
Brownian particles. This chain is allowed to wander everywhere in the plane. We
show that the scaling variables for the occupation times T_j, areas A_j and
winding angles \theta_j (j=1,...,n labels the particles) take the same general
form as in the usual Brownian motion. We also compute the asymptotic joint laws
P({T_j}), P({A_j}), P({\theta_j}) and discuss the correlations occuring in
those distributions.Comment: Latex, 17 pages, submitted to J. Phys.
Enhanced reaction kinetics in biological cells
The cell cytoskeleton is a striking example of "active" medium driven
out-of-equilibrium by ATP hydrolysis. Such activity has been shown recently to
have a spectacular impact on the mechanical and rheological properties of the
cellular medium, as well as on its transport properties : a generic tracer
particle freely diffuses as in a standard equilibrium medium, but also
intermittently binds with random interaction times to motor proteins, which
perform active ballistic excursions along cytoskeletal filaments. Here, we
propose for the first time an analytical model of transport limited reactions
in active media, and show quantitatively how active transport can enhance
reactivity for large enough tracers like vesicles. We derive analytically the
average interaction time with motor proteins which optimizes the reaction rate,
and reveal remarkable universal features of the optimal configuration. We
discuss why active transport may be beneficial in various biological examples:
cell cytoskeleton, membranes and lamellipodia, and tubular structures like
axons.Comment: 10 pages, 2 figure
Force-velocity relation and density profiles for biased diffusion in an adsorbed monolayer
In this paper, which completes our earlier short publication [Phys. Rev.
Lett. 84, 511 (2000)], we study dynamics of a hard-core tracer particle (TP)
performing a biased random walk in an adsorbed monolayer, composed of mobile
hard-core particles undergoing continuous exchanges with a vapor phase. In
terms of an approximate approach, based on the decoupling of the third-order
correlation functions, we obtain the density profiles of the monolayer
particles around the TP and derive the force-velocity relation, determining the
TP terminal velocity, V_{tr}, as the function of the magnitude of external bias
and other system's parameters. Asymptotic forms of the monolayer particles
density profiles at large separations from the TP, and behavior of V_{tr} in
the limit of small external bias are found explicitly.Comment: Latex, 31 pages, 3 figure
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