Polarization-resolved sensing with tilted fiber Bragg gratings: theory and limits of detection

Polarization based sensing with tilted fiber Bragg grating (TFBG) sensors is analysed theoretically by two alternative approaches. The first method is based on tracking the grating transmission for two orthogonal states of linear polarized light that are extracted from the measured Jones matrix or Stokes vectors of the TFBG transmission spectra. The second method is based on the measurements along the system principle axes and polarization dependent loss (PDL) parameter, also calculated from measured data. It is shown that the frequent crossing of the Jones matrix eigenvalues as a function of wavelength leads to a non-physical interchange of the calculated principal axes; a method to remove this unwanted mathematical artefact and to restore the order of the system eigenvalues and the corresponding principal axes is provided. A comparison of the two approaches reveals that the PDL method provides a smaller standard deviation and therefore lower limit of detection in refractometric sensing. Furthermore, the polarization analysis of the measured spectra allows for the identification of the principal states of polarization of the sensor system and consequentially for the calculation of the transmission spectrum for any incident polarization state. The stability of the orientation of the system principal axes is also investigated as a function of wavelength

Silver Nanocubes Coated in Ceria:Core/Shell Size Effects on Light-Induced Charge Transfer

Plasmonic sensitization of semiconductors is an attractive approach to increase light-induced photocatalytic performance; one method is to use plasmonic nanostructures in core@shell geometry. The occurrence and mechanism of synergetic effects in photocatalysis of such geometries are under intense debate and proposed to occur either through light-induced charge transfer (CT) or through thermal effects. This study focuses on the relation between the dimensions of Ag@CeO2 nanocubes, the wavelength-dependent efficiency, and the mechanism of light-induced direct CT. A 4-mercaptobenzoic acid (4-MBA) linker between core and shell acts as a Raman probe for CT. For all Ag@CeO2 nanocubes, CT increases with decreasing excitation wavelength, with notable increase at and below 514 nm. This is fully explainable by CT from silver to the 4-MBA LUMO, with the increase for excitation wavelengths that exceed the Ag/4-MBA LUMO gap of 2.28 eV (543 nm). A second general trend observed is an increase in CT yield with ceria shell thickness, which is assigned to relaxation of the excited electron further into the ceria conduction band, potentially producing defects

Both Ca2+ and Zn2+ are essential for S100A12 protein oligomerization and function

Background Human S100A12 is a member of the S100 family of EF-hand calcium-modulated proteins that are associated with many diseases including cancer, chronic inflammation and neurological disorders. S100A12 is an important factor in host/parasite defenses and in the inflammatory response. Like several other S100 proteins, it binds zinc and copper in addition to calcium. Mechanisms of zinc regulation have been proposed for a number of S100 proteins e.g. S100B, S100A2, S100A7, S100A8/9. The interaction of S100 proteins with their targets is strongly dependent on cellular microenvironment. Results The aim of the study was to explore the factors that influence S100A12 oligomerization and target interaction. A comprehensive series of biochemical and biophysical experiments indicated that changes in the concentration of calcium and zinc led to changes in the oligomeric state of S100A12. Surface plasmon resonance confirmed that the presence of both calcium and zinc is essential for the interaction of S100A12 with one of its extracellular targets, RAGE – the Receptor for Advanced Glycation End products. By using a single-molecule approach we have shown that the presence of zinc in tissue culture medium favors both the oligomerization of exogenous S100A12 protein and its interaction with targets on the cell surface. Conclusion We have shown that oligomerization and target recognition by S100A12 is regulated by both zinc and calcium. Our present work highlighted the potential role of calcium-binding S100 proteins in zinc metabolism and, in particular, the role of S100A12 in the cross talk between zinc and calcium in cell signaling

Self-optimized metal coatings for fiber plasmonics by electroless deposition

We present a novel method to prepare optimized metal coatings for infrared Surface Plasmon Resonance (SPR) sensors by electroless plating. We show that Tilted Fiber Bragg grating sensors can be used to monitor in real-time the growth of gold nano-films up to 70 nm in thickness and to stop the deposition of the gold at a thickness that maximizes the SPR (near 55 nm for sensors operating in the near infrared at wavelengths around 1550 nm). The deposited films are highly uniform around the fiber circumference and in spite of some nanoscale roughness (RMS surface roughness of 5.17 nm) the underlying gratings show high quality SPR responses in water

Polarization-selective excitation of plasmonic resonances in silver nanocube random arrays by optical fiber cladding mode evanescent fields

Near-field scanning optical microscopy was used in collection mode to examine the optical field distribution on the surface of tilted fiber Bragg gratings (TFBGs) coated with a layer of randomly spaced silver nanocubes. The nanocubes disturb the periodic pattern of the near field visible light distribution arising from counterpropagating cladding modes excited by the TFBG. Spots with more than two orders of magnitude enhancement of the near field light intensity were observed around the nanocubes, as well as an average enhancement over the whole surface of about an order of magnitude relative to uncoated fibers. The near field speckle pattern associated with nanocubes showed a 180-degree periodicity with respect to the linear polarization of the input excitation light launched in the fiber core. The observed phenomena are explained in terms of the plasmonic properties of silver nanocubes. The enhancement factors measured here explain previously observed improvements in the performance of metal nanoparticle coated TFBG devices in sensing and as sources of light for surface-enhanced spectroscopy

Evaluating Molecular Mechanical Potentials for Helical Peptides and Proteins

Multiple variants of the AMBER all-atom force field were quantitatively evaluated with respect to their ability to accurately characterize helix-coil equilibria in explicit solvent simulations. Using a global distributed computing network, absolute conformational convergence was achieved for large ensembles of the capped A21 and Fs helical peptides. Further assessment of these AMBER variants was conducted via simulations of a flexible 164-residue five-helix-bundle protein, apolipophorin-III, on the 100 ns timescale. Of the contemporary potentials that had not been assessed previously, the AMBER-99SB force field showed significant helix-destabilizing tendencies, with beta bridge formation occurring in helical peptides, and unfolding of apolipophorin-III occurring on the tens of nanoseconds timescale. The AMBER-03 force field, while showing adequate helical propensities for both peptides and stabilizing apolipophorin-III, (i) predicts an unexpected decrease in helicity with ALA→ARG+ substitution, (ii) lacks experimentally observed 310 helical content, and (iii) deviates strongly from average apolipophorin-III NMR structural properties. As is observed for AMBER-99SB, AMBER-03 significantly overweighs the contribution of extended and polyproline backbone configurations to the conformational equilibrium. In contrast, the AMBER-99φ force field, which was previously shown to best reproduce experimental measurements of the helix-coil transition in model helical peptides, adequately stabilizes apolipophorin-III and yields both an average gyration radius and polar solvent exposed surface area that are in excellent agreement with the NMR ensemble

How we House : A Shared Tower to Challenge Normative Living

This thesis examines the relationships between property ownership and tenant empowerment by proposing a 15-storey housing development aimed to foster community connection located in False Creek Flats, Vancouver. This development works within the current Canadian ownership context to propose a combined housing co-operative and housing society which would provide an alternative way of living and owning. The tower counters the model of strata and freehold ownership, which isolates households. The design sets to accommodate a diverse range of households by providing various unit types with different kinds of access to shared communal spaces. The intention is to challenge normative living and owning practices by proposing a housing typology and design strategies which can facilitate community connection and equity.Applied Science, Faculty ofArchitecture and Landscape Architecture (SALA), School ofUnreviewedGraduat

Improved refractive-index sensitivity of silver-nanocube monolayers on silicon films

Suitable substrates: An improvement in the refractive-index sensitivity is observed for the quadrupolar plasmonic mode of a monolayer of 60 nm silver nanocubes deposited on a thin silicon film. Dipolar plasmonic band splitting on this high-refractive-index substrate is stronger than on a glass substrate (see picture). As a result, the quadrupolar band is easier to identify, even in high-refractive-index liquids. The work demonstrates the importance of using high-refractive-index substrates. Copyrigh

Spatially inhomogeneous enhancement of fluorescence by a monolayer of silver nanoparticles

Near-field scanning optical microscopy (NSOM) was applied to study the effect of a two-dimensional array of silver nanoparticles on the spatial distribution and magnitude of fluorescence signal enhancement for a monolayer of Rhodamine 6G (Rh6G). Twenty polyelectrolyte monolayers were deposited between the nanoparticles and the dye by a layer-by-layer deposition technique resulting in a 15-20 nm separation cushion, necessary to minimize the fluorescence signal quenching. The fluorescence signal in NSOM images was found to be distributed inhomogeneously as small (100-200 nm in diameter) fluorescent clusters with typically 5-30 times higher fluorescence intensities than a sample without nanoparticles. The position and relative intensity of the clusters was found to be dependent on the excitation wavelength, suggesting that the enhancement originates from the nanoparticle surface plasmon resonance