Dataset for Effect of matrix solidification on the structure formation in electromagnetic suspensions

Dataset from numerical simulations describing the structure formation in suspensions with electromagnetically active particles in an external field, as described in detail in the paper Konstantinos Manikas, Markus Hütter, Patrick D. Anderson: Effect of matrix solidification on the structure formation in electromagnetic suspensions. Appl. Phys. A, 128: 709 (11 pages), 2022. DOI: 10.1007/s00339-022-05844-y WWW: https://doi.org/10.1007/s00339-022-05844-y which should be cited whenever this dataset is used. The data compiled here is the basis for figures 4, 5, and 6 in that paper

Source data for the publication: Curved Surfaces Induce Metachronal Motion of Microscopic Magnetic Cilia

This data set contains the source data of the publication: Cui, Z., Islam, T. ul, Wang, Y. & Toonder, J.M.J. den (2024). Curved surfaces induce metachronal motion of microscopic magnetic cilia. ACS Appl. Mater. Interfaces. https://doi.org/10.1021/acsami.4c06884. In this paper, we present a novel elegant method that induces metachronal motion of arrays of identical microscopic magnetic artificial cilia by applying a simple rotating uniform magnetic field. The key idea of our method is to place arrays of cilia on surfaces with a specially designed curvature. This results in consecutive cilia experiencing different magnetic field directions at each point in time, inducing a phase lag in their motion, thereby causing collective wave-like motion. We characterize the local flow patterns generated by the motion of the cilia, revealing the formation of vortical patterns. The data are experimentally obtained with methods described in the publication

Unraveling the interaction between singlet state atomic oxygen and water: toward the formation of oxywater and hydrogen peroxide

We provide example input files to perform simulations of our article "Unraveling the interaction between singlet state atomic oxygen O(1D) and water: toward the formation of oxywater and hydrogen peroxide"

Source data for the publication: On-demand microfluidic mixing by actuating integrated magnetic microwalls

This data set contains the source data of the publication: Stef Broeren, Inês Figueiredo Pereira, Tongsheng Wang, Jaap den Toonder, Ye Wang. On-demand microfluidic mixing by actuating integrated magnetic microwalls. Lab on a Chip 2023,23, 1524-1530. DOI https://doi.org/10.1039/D2LC01168A. We demonstrated an on-demand micromixer based on the actuation of magnetic microwalls. The data are experimentally obtained with methods described in the publication

Source data for the publication: Miniaturized metachronal magnetic artificial cilia

This data set contains the source data of the publication: Cui, Z., Wang, Y., Zhang, S., Wang, T. & Toonder, J.M.J. den (2023). Self-cleaning surfaces realized by biologically sized magnetic artificial cilia. PNAS 2023, Vol. 120, No. 35, e2304519120. https://doi.org/10.1073/pnas.2304519120. In this study, we introduce a concept that generates metachronal motion of magnetic artificial cilia (MAC), even though the MAC are all identical, and the applied external magnetic field is uniform. This is achieved by integrating a paramagnetic substructure in the substrate underneath the MAC. Uniquely, we can create both symplectic and antiplectic metachrony by changing the relative positions of MAC and substructure. We demonstrate the flow generation of the two metachronal motions in both high and low Reynolds number conditions. The data are experimentally obtained with methods described in the publication

Source data for the publication: Enhancement of microalgae growth using magnetic artificial cilia

This data set contains the source data of the publication: Verburg, T. H. C. M., Schaap, A. M., Zhang, S., den Toonder, J. M. J., & Wang, Y. (2021). Enhancement of microalgae growth using magnetic artificial cilia. Biotechnology and Bioengineering. https://doi.org/10.1002/bit.27756. In this study, we fabricated magnetic artificial cilia (MAC) and implemented them in millimeter scale culture wells and conducted growth experiments with Scenedesmus subspicatus while actuating the MAC in a rotating magnetic field to create flow and mixing. In addition, surface of MAC was made hydrophilic using plasma treatment and its effect on growth was compared with untreated, hydrophobic MAC. The experiments showed that the growth was enhanced by ten and two times with hydrophobic and hydrophilic MAC, respectively, compared with control groups which contain no MAC. The data are experimentally obtained with methods described in the publication

Microfluidic Models of Metastasis: In vitro approaches to study the tumor microenvironment - supplementary design and video files

Design files of microfluidic and peripheral devices designed in the PhD thesis "Microfluidic Models of Metastasis: In vitro approaches to study the tumor microenvironment" of Jelle J.F. Sleeboom, and 10 experimental videos. A catalogue record of the thesis is available from the Eindhoven University of Technology Library. ISBN: 978-90-386-5104-

Polytope Division Method

Code to perform the Polytope Division Method

Data underlying the publication "Notch signaling regulates strain-mediated phenotypic switching of vascular smooth muscle cells"

The data and resulting publication show the role of Notch signaling in regulating strain-mediated phenotypic switching of vascular smooth muscle cells. The dataset consists of custom-built scripts for strain analysis, stretch quantification data, immunofluorescence staining and real-time polymerase chain reaction data

Source data for the publication: Nanomagnetic Elastomers for Realizing Highly Responsive Micro- and Nanosystems

This data set contains the source data of the publication: Venkataramanachar, B.B., Li, J., Islam, T.U., Wang, Y. and den Toonder, J.M.J, 2023. Nanomagnetic Elastomers for Realizing Highly Responsive Micro-and Nanosystems. Nano Letters, 23(20), pp.9203-9211.https://doi.org/10.1021/acs.nanolett.3c00819. In this study, a material preparation process is reported that yields a library of nanomagnetic elastomers with high magnetic particle concentrations suitable for fabricating highly compliant submicron magnetic structures. The data are experimentally obtained with methods described in the publication