5,650 research outputs found
Deterministic mechanical model of T-killer cell polarization reproduces the wandering of aim between simultaneously engaged targets
T-killer cells of the immune system eliminate virus-infected and tumorous cells through direct cell-cell interactions. Reorientation of the killing apparatus inside the T cell to the T-cell interface with the target cell ensures specificity of the immune response. The killing apparatus can also oscillate next to the cell-cell interface. When two target cells are engaged by the T cell simultaneously, the killing apparatus can oscillate between the two interface areas. This oscillation is one of the most striking examples of cell movements that give the microscopist an unmechanistic impression of the cell's fidgety indecision. We have constructed a three-dimensional, numerical biomechanical model of the molecular-motor-driven microtubule cytoskeleton that positions the killing apparatus. The model demonstrates that the cortical pulling mechanism is indeed capable of orienting the killing apparatus into the functional position under a range of conditions. The model also predicts experimentally testable limitations of this commonly hypothesized mechanism of T-cell polarization. After the reorientation, the numerical solution exhibits complex, multidirectional, multiperiodic, and sustained oscillations in the absence of any external guidance or stochasticity. These computational results demonstrate that the strikingly animate wandering of aim in T-killer cells has a purely mechanical and deterministic explanation. © 2009 Kim, Maly
Ferroelectricity induced by interatomic magnetic exchange interaction
Multiferroics, where two or more ferroic order parameters coexist, is one of
the hottest fields in condensed matter physics and materials science[1-9].
However, the coexistence of magnetism and conventional ferroelectricity is
physically unfavoured[10]. Recently several remedies have been proposed, e.g.,
improper ferroelectricity induced by specific magnetic[6] or charge orders[2].
Guiding by these theories, currently most research is focused on frustrated
magnets, which usually have complicated magnetic structure and low magnetic
ordering temperature, consequently far from the practical application. Simple
collinear magnets, which can have high magnetic transition temperature, have
never been considered seriously as the candidates for multiferroics. Here, we
argue that actually simple interatomic magnetic exchange interaction already
contains a driving force for ferroelectricity, thus providing a new microscopic
mechanism for the coexistence and strong coupling between ferroelectricity and
magnetism. We demonstrate this mechanism by showing that even the simplest
antiferromagnetic (AFM) insulator MnO, can display a magnetically induced
ferroelectricity under a biaxial strain
High Energy Neutrino Astronomy: Towards Kilometer-Scale Detectors
Of all high-energy particles, only neutrinos can directly convey astronomical
information from the edge of the universe---and from deep inside the most
cataclysmic high-energy processes. Copiously produced in high-energy
collisions, travelling at the velocity of light, and not deflected by magnetic
fields, neutrinos meet the basic requirements for astronomy. Their unique
advantage arises from a fundamental property: they are affected only by the
weakest of nature's forces (but for gravity) and are therefore essentially
unabsorbed as they travel cosmological distances between their origin and us.
Many of the outstanding mysteries of astrophysics may be hidden from our sight
at all wavelengths of the electromagnetic spectrum because of absorption by
matter and radiation between us and the source. For example, the hot dense
regions that form the central engines of stars and galaxies are opaque to
photons. In other cases, such as supernova remnants, gamma ray bursters, and
active galaxies, all of which may involve compact objects or black holes at
their cores, the precise origin of the high-energy photons emerging from their
surface regions is uncertain. Therefore, data obtained through a variety of
observational windows---and especially through direct observations with
neutrinos---may be of cardinal importance. In this talk, the scientific goals
of high energy neutrino astronomy and the technical aspects of water and ice
Cherenkov detectors are examined, and future experimental possibilities,
including a kilometer-square deep ice neutrino telescope, are explored.Comment: 13 pages, Latex, 6 postscript figures, uses aipproc.sty and epsf.sty.
Talk presented at the International Symposium on High Energy Gamma Ray
Astronomy, Heidelberg, June 200
Spatial and topological organization of DNA chains induced by gene co-localization
Transcriptional activity has been shown to relate to the organization of
chromosomes in the eukaryotic nucleus and in the bacterial nucleoid. In
particular, highly transcribed genes, RNA polymerases and transcription factors
gather into discrete spatial foci called transcription factories. However, the
mechanisms underlying the formation of these foci and the resulting topological
order of the chromosome remain to be elucidated. Here we consider a
thermodynamic framework based on a worm-like chain model of chromosomes where
sparse designated sites along the DNA are able to interact whenever they are
spatially close-by. This is motivated by recurrent evidence that there exists
physical interactions between genes that operate together. Three important
results come out of this simple framework. First, the resulting formation of
transcription foci can be viewed as a micro-phase separation of the interacting
sites from the rest of the DNA. In this respect, a thermodynamic analysis
suggests transcription factors to be appropriate candidates for mediating the
physical interactions between genes. Next, numerical simulations of the polymer
reveal a rich variety of phases that are associated with different topological
orderings, each providing a way to increase the local concentrations of the
interacting sites. Finally, the numerical results show that both
one-dimensional clustering and periodic location of the binding sites along the
DNA, which have been observed in several organisms, make the spatial
co-localization of multiple families of genes particularly efficient.Comment: Figures and Supplementary Material freely available on
http://dx.doi.org/10.1371/journal.pcbi.100067
Search for Exotic Strange Quark Matter in High Energy Nuclear Reactions
We report on a search for metastable positively and negatively charged states
of strange quark matter in Au+Pb reactions at 11.6 A GeV/c in experiment E864.
We have sampled approximately six billion 10% most central Au+Pb interactions
and have observed no strangelet states (baryon number A < 100 droplets of
strange quark matter). We thus set upper limits on the production of these
exotic states at the level of 1-6 x 10^{-8} per central collision. These limits
are the best and most model independent for this colliding system. We discuss
the implications of our results on strangelet production mechanisms, and also
on the stability question of strange quark matter.Comment: 21 pages, 9 figures, to be published in Nuclear Physics A (Carl Dover
memorial edition
A Summary of the Inaugural WHO Classification of Pediatric Tumors: Transitioning from the Optical into the Molecular Era
Pediatric tumors are uncommon, yet are the leading cause of cancer-related death in childhood. Tumor types, molecular characteristics, and pathogenesis are unique, often originating from a single genetic driver event. The specific diagnostic challenges of childhood tumors led to the development of the first World Health Organization (WHO) Classification of Pediatric Tumors. The classification is rooted in a multilayered approach, incorporating morphology, IHC, and molecular characteristics. The volume is organized according to organ sites and provides a single, state-of-the-art compendium of pediatric tumor types. A special emphasis was placed on “blastomas,” which variably recapitulate the morphologic maturation of organs from which they originate
On the use of the group SO(4,2) in atomic and molecular physics
In this paper the dynamical noninvariance group SO(4,2) for a hydrogen-like
atom is derived through two different approaches. The first one is by an
established traditional ascent process starting from the symmetry group SO(3).
This approach is presented in a mathematically oriented original way with a
special emphasis on maximally superintegrable systems, N-dimensional extension
and little groups. The second approach is by a new symmetry descent process
starting from the noninvariance dynamical group Sp(8,R) for a four-dimensional
harmonic oscillator. It is based on the little known concept of a Lie algebra
under constraints and corresponds in some sense to a symmetry breaking
mechanism. This paper ends with a brief discussion of the interest of SO(4,2)
for a new group-theoretical approach to the periodic table of chemical
elements. In this connection, a general ongoing programme based on the use of a
complete set of commuting operators is briefly described. It is believed that
the present paper could be useful not only to the atomic and molecular
community but also to people working in theoretical and mathematical physics.Comment: 31 page
Investigating the association between obesity and asthma in 6- to 8-year-old Saudi children:a matched case-control study
Background: Previous studies have demonstrated an association between obesity and asthma, but there remains considerable uncertainty about whether this reflects an underlying causal relationship. Aims: To investigate the association between obesity and asthma in pre-pubertal children and to investigate the roles of airway obstruction and atopy as possible causal mechanisms. Methods: We conducted an age- and sex-matched case–control study of 1,264 6- to 8-year-old schoolchildren with and without asthma recruited from 37 randomly selected schools in Madinah, Saudi Arabia. The body mass index (BMI), waist circumference and skin fold thickness of the 632 children with asthma were compared with those of the 632 control children without asthma. Associations between obesity and asthma, adjusted for other potential risk factors, were assessed separately in boys and girls using conditional logistic regression analysis. The possible mediating roles of atopy and airway obstruction were studied by investigating the impact of incorporating data on sensitisation to common aeroallergens and measurements of lung function. Results: BMI was associated with asthma in boys (odds ratio (OR)=1.14, 95% confidence interval (CI), 1.08–1.20; adjusted OR=1.11, 95% CI, 1.03–1.19) and girls (OR=1.37, 95% CI, 1.26–1.50; adjusted OR=1.38, 95% CI, 1.23–1.56). Adjusting for forced expiratory volume in 1 s had a negligible impact on these associations, but these were attenuated following adjustment for allergic sensitisation, particularly in girls (girls: OR=1.25; 95% CI, 0.96–1.60; boys: OR=1.09, 95% CI, 0.99–1.19). Conclusions: BMI is associated with asthma in pre-pubertal Saudi boys and girls; this effect does not appear to be mediated through respiratory obstruction, but in girls this may at least partially be mediated through increased risk of allergic sensitisation
Efficiency of Organelle Capture by Microtubules as a Function of Centrosome Nucleation Capacity: General Theory and the Special Case of Polyspermia
Transport of organelles along microtubules is essential for the cell metabolism and morphogenesis. The presented analysis derives the probability that an organelle of a given size comes in contact with the microtubule aster. The question is asked how this measure of functionality of the microtubule aster is controlled by the centrosome. A quantitative model is developed to address this question. It is shown that for the given set of cellular parameters, such as size and total tubulin content, a centrosome nucleation capacity exists that maximizes the probability of the organelle capture. The developed general model is then applied to the capture of the female pronucleus by microtubules assembled on the sperm centrosome, following physiologically polyspermic fertilization. This application highlights an unintuitive reflection of nonlinearity of the nucleated polymerization of the cellular pool of tubulin. The prediction that the sperm centrosome should lower its nucleation capacity in the face of the competition from the other sperm is a stark illustration of the new optimality principle. Overall, the model calls attention to the capabilities of the centrosomal pathway of regulation of the transport-related functionality of the microtubule cytoskeleton. It establishes a quantitative and conceptual framework that can guide experiment design and interpretation
CMB Telescopes and Optical Systems
The cosmic microwave background radiation (CMB) is now firmly established as
a fundamental and essential probe of the geometry, constituents, and birth of
the Universe. The CMB is a potent observable because it can be measured with
precision and accuracy. Just as importantly, theoretical models of the Universe
can predict the characteristics of the CMB to high accuracy, and those
predictions can be directly compared to observations. There are multiple
aspects associated with making a precise measurement. In this review, we focus
on optical components for the instrumentation used to measure the CMB
polarization and temperature anisotropy. We begin with an overview of general
considerations for CMB observations and discuss common concepts used in the
community. We next consider a variety of alternatives available for a designer
of a CMB telescope. Our discussion is guided by the ground and balloon-based
instruments that have been implemented over the years. In the same vein, we
compare the arc-minute resolution Atacama Cosmology Telescope (ACT) and the
South Pole Telescope (SPT). CMB interferometers are presented briefly. We
conclude with a comparison of the four CMB satellites, Relikt, COBE, WMAP, and
Planck, to demonstrate a remarkable evolution in design, sensitivity,
resolution, and complexity over the past thirty years.Comment: To appear in: Planets, Stars and Stellar Systems (PSSS), Volume 1:
Telescopes and Instrumentatio
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