507 research outputs found

    Generation of Optical Chirality Patterns with Plane Waves, Evanescent Waves and Surface Plasmon Waves

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    We systematically investigate the generation of optical chirality patterns by applying the superposition of two waves in three scenarios, namely plane waves in free space, evanescent waves of totally reflected light at dielectric interface and propagating surface plasmon waves on a metallic surface. In each scenario, the general analytical solution of the optical chirality pattern is derived for different polarization states and propagating directions of the two waves. The analytical solutions are verified by numerical simulations. Spatially structured optical chirality patterns can be generated in all scenarios if the incident polarization states and propagation directions are correctly chosen. Optical chirality enhancement can be obtained from the constructive interference of free-space circularly polarized light or enhanced evanescent waves of totally reflected light. Surface plasmon waves do not provide enhanced optical chirality unless the near-field intensity enhancement is sufficiently high. The structured optical chirality patterns may find applications in chirality sorting, chiral imaging and circular dichroism spectroscopy

    Absolute Entropy and Energy of Carbon Dioxide Using the Two-Phase Thermodynamic Model

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    The two-phase thermodynamic (2PT) model is used to determine the absolute entropy and energy of carbon dioxide over a wide range of conditions from molecular dynamics trajectories. The 2PT method determines the thermodynamic properties by applying the proper statistical mechanical partition function to the normal modes of a fluid. The vibrational density of state (DoS), obtained from the Fourier transform of the velocity autocorrelation function, converges quickly, allowing the free energy, entropy, and other thermodynamic properties to be determined from short 20-ps MD trajectories. The anharmonic effects in the vibrations are accounted for by the broadening of the normal modes into bands from sampling the velocities over the trajectory. The low frequency diffusive modes, which lead to finite DoS at zero frequency, are accounted for by considering the DoS as a superposition of gas-phase and solid-phase components (two phases). The analytical decomposition of the DoS allows for an evaluation of properties contributed by different types of molecular motions. We show that this 2PT analysis leads to accurate predictions of entropy and energy of CO_2 over a wide range of conditions (from the triple point to the critical point of both the vapor and the liquid phases along the saturation line). This allows the equation of state of CO_2 to be determined, which is limited only by the accuracy of the force field. We also validated that the 2PT entropy agrees with that determined from thermodynamic integration, but 2PT requires only a fraction of the time. A complication for CO_2 is that its equilibrium configuration is linear, which would have only two rotational modes, but during the dynamics it is never exactly linear, so that there is a third mode from rotational about the axis. In this work, we show how to treat such linear molecules in the 2PT framework

    Metabolic labelling of cholesteryl glucosides in Helicobacter pylori reveals how the uptake of human lipids enhances bacterial virulence.

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    Helicobacter pylori infects approximately half of the human population and is the main cause of various gastric diseases. This pathogen is auxotrophic for cholesterol, which it converts upon uptake to various cholesteryl Ī±-glucoside derivatives, including cholesteryl 6'-acyl and 6'-phosphatidyl Ī±-glucosides (CAGs and CPGs). Owing to a lack of sensitive analytical methods, it is not known if CAGs and CPGs play distinct physiological roles or how the acyl chain component affects function. Herein we established a metabolite-labelling method for characterising these derivatives qualitatively and quantitatively with a femtomolar detection limit. The development generated an MS/MS database of CGds, allowing for profiling of all the cholesterol-derived metabolites. The subsequent analysis led to the unprecedented information that these bacteria acquire phospholipids from the membrane of epithelial cells for CAG biosynthesis. The resulting increase in longer or/and unsaturated CAG acyl chains helps to promote lipid raft formation and thus delivery of the virulence factor CagA into the host cell, supporting the idea that the host/pathogen interplay enhances bacterial virulence. These findings demonstrate an important connection between the chain length of CAGs and the bacterial pathogenicity

    Microfluidic assisted synthesis of silver nanoparticleā€“chitosan composite microparticles for antibacterial applications

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    AbstractSilver nanoparticle (Ag NP)-loaded chitosan composites have numerous biomedical applications; however, fabricating uniform composite microparticles remains challenging. This paper presents a novel microfluidic approach for single-step and in situ synthesis of Ag NP-loaded chitosan microparticles. This proposed approach enables obtaining uniform and monodisperse Ag NP-loaded chitosan microparticles measuring several hundred micrometers. In addition, the diameter of the composites can be tuned by adjusting the flow on the microfluidic chip. The composite particles containing Ag NPs were characterized using UVā€“vis spectra and scanning electron microscopy-energy dispersive X-ray spectrometry data. The characteristic peaks of Ag NPs in the UVā€“vis spectra and the element mapping or pattern revealed the formation of nanosized silver particles. The results of antibacterial tests indicated that both chitosan and composite particles showed antibacterial ability, and Ag NPs could enhance the inhibition rate and exhibited dose-dependent antibacterial ability. Because of the properties of Ag NPs and chitosan, the synthesized composite microparticles can be used in several future potential applications, such as bactericidal agents for water disinfection, antipathogens, and surface plasma resonance enhancers

    Initial Presentations Predict Mortality in Pulmonary Tuberculosis Patients - A Prospective Observational Study

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    Despite effective anti-TB treatments, tuberculosis remains a serious threat to public health and is associated with high mortality. Old age and multiple co-morbidities are known risk factors for death. The association of clinical presentations with mortality in pulmonary tuberculosis patients remains an issue of controversy.This prospective observational study enrolled newly diagnosed, culture-proven pulmonary tuberculosis patients from five medical centers and one regional hospital, which were referral hospitals of TB patients. Radiographic findings and clinical symptoms were determined at the time of diagnosis. Patients who died for any reason during the course of anti-TB treatment were defined as mortality cases and death that occurred within 30 days of initiating treatment was defined as early mortality. Clinical factors associated with overall mortality and early mortality were investigated.A total of 992 patients were enrolled and 195 (19.7%) died. Nearly one-third (62/195, 31.8%) of the deaths occurred before or within 30 days of treatment initiation. Older age (RRā€Š=ā€Š1.04, 95%CI: 1.03ā€“1.05), malignancy (RRā€Š=ā€Š2.42, 95%CI: 1.77ā€“3.31), renal insufficiency (RRā€Š=ā€Š1.77, 95%CI: 1.12ā€“2.80), presence of chronic cough (RRā€Š=ā€Š0.63, 95%CI: 0.47ā€“0.84), fever (RRā€Š=ā€Š1.45, 95%CI: 1.09ā€“1.94), and anorexia (RRā€Š=ā€Š1.49, 95%CI: 1.07ā€“2.06) were independently associated with overall mortality. Kaplan-Meier survival analysis demonstrated significantly higher mortality in patients present with fever (p<0.001), anorexia (pā€Š=ā€Š0.005), and without chronic cough (p<0.001). Among patients of mortality, those with respiratory symptoms of chronic cough (RRā€Š=ā€Š0.56, 95%CI: 0.33ā€“0.98) and dyspnea (HRā€Š=ā€Š0.51, 95%CI: 0.27ā€“0.98) were less likely to experience early mortality. The radiological features were comparable between survivors and non-survivors.In addition to demographic characteristics, clinical presentations including the presence of fever, anorexia, and the absence of chronic cough, were also independent predictors for on-treatment mortality in pulmonary tuberculosis patients
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