Selection breeding program of Nan'ao Golden Scallop Chlamys nobilis with higher nutritional values and less susceptible to stress

The Nan'ao Golden Scallop discussed in this paper is a new breed of noble scallop, Chlamys nobilis, produced by four generations of genetic breeding selections and two generations of culture demonstrations. Performed for the first time at Shantou University, the genetic breeding program was motivated by the need to reduce vulnerability and improve the adaptive capacity of noble scallops to the dynamic environment. This paper reviews the scientific evidences on aquaculture advantages of Nan'ao Golden Scallop, and identifies gaps in knowledge that require further research. From the analysis of published data, it is obvious that Nan'ao Golden Scallop is more nutritious and less susceptible to stress than common brown scallops. The high TCC of Nan'ao Golden Scallop up-regulate the expression of various immune related genes under stressful conditions. Since molluscs do not possess specific immunity, the information in this paper is very useful for improving the aquaculture performance of molluscs by selective breeding techniques

7-Ketocholesterol Induces Autophagy in Vascular Smooth Muscle Cells through Nox4 and Atg4B

Oxidized lipoproteins stimulate autophagy in advanced atherosclerotic plaques. However, the mechanisms underlying autophagy induction and the role of autophagy in atherogenesis remain to be determined. This study was designed to investigate the mechanisms by which 7-ketocholesterol (7-KC), a major component of oxidized lipoproteins, induces autophagy. This study was also designed to determine the effect of autophagy induction on apoptosis, a central event in the development of atherosclerosis. Exposure of human aortic smooth muscle cells to 7-KC increased autophagic flux. Autophagy induction was suppressed by treating the cells with either a reactive oxygen species scavenger or an antioxidant. Administration of 7-KC concomitantly up-regulated Nox4 expression, increased intracellular hydrogen peroxide levels, and inhibited autophagy-related gene 4B activity. Catalase overexpression to remove hydrogen peroxide or Nox4 knockdown with siRNA reduced intracellular hydrogen peroxide levels, restored autophagy-related gene 4B activity, and consequently attenuated 7-KC–induced autophagy. Moreover, inhibition of autophagy aggravated both endoplasmic reticulum (ER) stress and cell death in response to 7-KC. In contrast, up-regulation of autophagic activity by rapamycin had opposite effects. Finally, activation of autophagy by chronic rapamycin treatment attenuated ER stress, apoptosis, and atherosclerosis in apolipoprotein E knockout (ApoE−/−) mouse aortas. In conclusion, we demonstrate that up-regulation of autophagy is a cellular protective response that attenuates 7-KC–induced cell death in human aortic smooth muscle cells

High-Density Genetic Linkage Maps Provide Novel Insights Into ZW/ZZ Sex Determination System and Growth Performance in Mud Crab (Scylla paramamosain)

Mud crab, Scylla paramamosain is one of the most important crustacean species in global aquaculture. To determine the genetic basis of sex and growth-related traits in S. paramamosain, a high-density genetic linkage map with 16,701 single nucleotide polymorphisms (SNPs) was constructed using SLAF-seq and a full-sib family. The consensus map has 49 linkage groups, spanning 5,996.66 cM with an average marker-interval of 0.81 cM. A total of 516 SNP markers, including 8 female-specific SNPs segregated in two quantitative trait loci (QTLs) for phenotypic sex were located on LG32. The presence of female-specific SNP markers only on female linkage map, their segregation patterns and lower female: male recombination rate strongly suggest the conformation of a ZW/ZZ sex determination system in S. paramamosain. The QTLs of most (90%) growth-related traits were found within a small interval (25.18–33.74 cM) on LG46, highlighting the potential involvement of LG46 in growth. Four markers on LG46 were significantly associated with 10–16 growth-related traits. BW was only associated with marker 3846. Based on the annotation of transcriptome data, 11 and 2 candidate genes were identified within the QTL regions of sex and growth-related traits, respectively. The newly constructed high-density genetic linkage map with sex-specific SNPs, and the identified QTLs of sex- and growth-related traits serve as a valuable genetic resource and solid foundation for marker-assisted selection and genetic improvement of crustaceans

Climate change and n-3 LC-PUFA availability

Omega-3 long-chain polyunsaturated fatty acids (n-3 LC-PUFA) are essential fatty acids for the growth, development and survival of virtually all organisms. There is increasing evidence that anthropogenic climate change has a direct and indirect impact on the availability of natural n-3 LC-PUFA. However, this information is fragmented and not well organized. Therefore, this article reviewed published data from laboratory experiments, field experiments and model simulations to reveal the impact of climate change on the global supply of natural n-3 LC-PUFA and how this will limit the availability of n-3 LC-PUFA in the future food web. In general, climate change can significantly reduce the availability of natural n-3 LC-PUFA in grazing food webs in the following ways: 1) decrease the total biomass of phytoplankton and shift the plankton community structure to a smaller size, which also reduce the biomass of animals in higher trophics; 2) reduce the n-3 LC-PUFA content and/or quality (n-3: n-6 ratio) of all marine organisms; 3) reduce the transfer efficiency of n-3 LC-PUFA in grazing food web. In addition, as an anthropogenic climate adaptation measure, this review also proposed some alternative sources of n-3 LC-PUFA and determined the direction of future research. The information in this article is very useful for providing a critical analysis of the impact of climate change on the supply of natural n-3 LC-PUFA. Such information will aid to establish climate adaptation or management measures, and determine the direction of future research

Ensemble Just-In-Time Learning-Based Soft Sensor for Mooney Viscosity Prediction in an Industrial Rubber Mixing Process

The lack of online sensors for Mooney viscosity measurement has posed significant challenges for enabling efficient monitoring, control, and optimization of industrial rubber mixing process. To obtain real-time and accurate estimations of Mooney viscosity, a novel soft sensor method, referred to as multimodal perturbation- (MP-) based ensemble just-in-time learning Gaussian process regression (MP-EJITGPR), is proposed by exploiting ensemble JIT learning. This method employs perturbations on similarity measure and input variables for generating the diversity of JIT learners. Furthermore, a set of accurate and diverse JIT learners are built through an evolutionary multiobjective optimization by balancing the accuracy and diversity objectives explicitly. Moreover, all base JIT learners are combined adaptively using a finite mixture mechanism. The proposed method is applied to an industrial rubber mixing process for Mooney viscosity prediction, and the experimental results demonstrate its effectiveness and superiority over traditional soft sensor methods

Salinity gradients drove the gut and stomach microbial assemblages of mud crabs (Scylla paramamosain) in marine environments

Salinity changes have profound effects on the development, physiology, and molecular activity, as well as the associated microbiome of organisms living in marine and estuarine ecosystems. The associated microbiomes of aquatic organisms are reported to support key physiological functions such as nutrition, reproduction, behavior, and health. The mud crabs, a euryhaline crustacean species, has extra-ordinary ability to survive in a wide range of salinities. Although mud crabs are exposed to diverse salinity conditions, little is known about how these variations affect the symbiotic bacteria they harbor in each environment. This study aimed to deciphering the associated microbiome assembly of mud crabs as well elucidating the potential implications of different salinity conditions in this process. Here, we used high-throughput sequencing to examine how the assemblages of bacteria in the gut of mud crabs are shaped by different salinity gradients. A total of 57 bacterial phyla were detected with Firmicutes and Proteobacteria dominant. A greater difference of microbiome in the gut than stomach of mud crabs indicating guts were more sensitive to different salinity environments. Specific bacterial taxa were enriched in the guts of mud crabs sampled from different salinity settings. Furthermore, functional enrichment analyses also showed that only gut bacteria had significant differences of functions in different salinity levels (high salinity versus low salinity), playing critical roles of signal transduction, and cell growth and death pathways. These results suggested that the microbiota in guts of crabs are more prone to variations in the salinity. These findings provide a comprehensive understanding of the composition and plasticity of mud crabs microbiota, which could lead to innovative strategies development for boosting the aquaculture industry of mud crabs

Myo-inositol accelerates the metamorphosis from megalopa to crablet of Scylla paramamosain by modulating cuticle decomposition and reconstruction

The mud crab Scylla paramamosain is a key species in China due to its high nutritional value and great economic worth and has grown in popularity. Myo-inositol can modulate versatile physiological functions in aquatic animals. In the present study, S. paramamosain megalopa were given graded concentrations of myo-inositol (0, 1, 2, 4, and 8 ppm) by water immersion to explore how their metamorphosis would be affected. The results showed that supplementing with myo-inositol remarkably increased transformation and survival rate from megalopa to crablet by at least 1.16 and 1.26 times, respectively. To decipher the molecular mechanism of how myo-inositol increases metamorphosis and survival rate, we further performed transcriptome-based gene expression profiling of both megalopa and crablet treated with myo-inositol. The integrative transcriptome analyses predicted that the differentially expressed genes (DEGs) were significantly enriched in chitinase activity, structural constituent of cuticle, and chitin binding, which are associated with the decomposition and reconstruction of cuticle. qPCR results confirmed that myo-inositol mediated gene expression levels of the above cuticle-related pathways. Considering the importance of the cuticle in exoskeleton formation and molting, it can be concluded that myo-inositol-induced changes in the cuticle decomposition and reconstruction might have accelerated the transformation from megalopa to crablet of S. paramamosain. Besides, numerous DEGs were significantly enriched in protein digestion and absorption, amino sugar and nucleotide sugar metabolism. It implies that myo-inositol may improve survival by regulating energy or nutrient absorption. Additionally, the accelerated metamorphosis by myo-inositol may improve survival from megalopa to crablet of S. paramamosain. Overall, this study will provide the first insights into the underlying molecular mechanisms by which myo-inositol increases metamorphosis and survival

Evaluation of the Feasibility of Harvest Optimisation of Soft-Shell Mud Crab (Scylla paramamosain) from the Perspective of Nutritional Values

Soft-shell crabs have attracted consumers’ attention due to their unique taste and nutritional value. To evaluate the feasibility of harvest optimisation of soft-shell mud crabs, the proximate composition, mineral composition, and total carotenoid, amino acid, and fatty acid contents of edible parts of male and female soft-shell mud crabs at different moulting stages were determined and compared from a nutritional value perspective. The results showed that the sex and moulting stages could significantly affect the nutritional values of the edible portions of soft-shell crabs. The female or male soft-shell crabs in the postmoult Ⅰ stage had a much richer mineral element content than that in other moulting stages. The total carotenoid content in female soft-shell crabs was significantly higher than that in male crabs in all moulting stages, while male soft-shell crabs had better performance in amino acid nutrition than female soft-shell crabs. Moreover, it was found that soft-shell crabs in the postmoult Ⅱ stage had significantly higher contents of eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA), while significantly lower contents of saturated fatty acids (SFA) than those in other stages. The present study will provide a reference basis for the diversified cultivation of soft-shell crabs, and further promote the development of the mud crab industry