Nutrient limitation dynamics of a coastal Cape Cod pond : seasonal trends in alkaline phosphatase activity

Submitted in partial fulfillment of the requirements for the degree of Master of Science at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution November 2000A bi-weekly seasonal study was conducted in Ashumet Pond (Cape Cod, Massachusetts). The Redfield Ratio (106C:16N:1P) and alkaline phosphatase activity (APA) were utilized in tandem as nutrient deficiency indicators (NDIs) for phytoplankton. The study objective was to evaluate the limiting nutrient status of the pond throughout the growing season. The development of a high throughput method for fluorometrically measuring APA allowed for a large quantity of pond-water samples to be analyzed. The new method utilized a cytofluor, a fluorescence multi-well plate reader, which increased sample throughput by 75% compared to a standard filter fluorometer method. The detection limit, capability to measure APA at different time intervals, and performance at sea were tested. APA measurements made using the cytofluor were comparable to those made using a standard filter fluorometer, thus indicating that the cytofluor is a suitable and preferred replacement to the fluorometer for APA measurements. The presence of alkaline phosphatase, an inducible phospho-hydrolytic enzyme, is commonly used as an NDI diagnostic for phosphate limitation. A nutrient enrichment incubation re-affirmed the use of APA as a robust indicator of phosphate limitation in phytoplankton. APA data indicate that the system experienced episodic periods of phosphate-deficiency, implying that the limiting nutrient regime was not static, but was changeable throughout the growing season. Seasonal trends in dissolved N:P and particulate C:P ratios often contradict the APA results, however, suggesting that the Redfield Ratio is an unreliable indicator of the overall nutrient limitation regime of the pond. The observed discrepancies between C:N:P and APA can be reconciled by taking into account seasonal changes in species composition, which played an important role in driving seasonal APA trends.Funding was provided by: Air Force/University of Massachusetts, Dartmouth (WHOI grant#1503770) and a WHOI Educational Fellowship

Amazon deforestation alters small stream structure, nitrogen biogeochemistry and connectivity to larger rivers

Author Posting. © The Author(s), 2010. This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution. The definitive version was published in Biogeochemistry 105 (2011): 53-74, doi:10.1007/s10533-010-9540-4.Human activities that modify land cover can alter the structure and biogeochemistry of small streams but these effects are poorly known over large regions of the humid tropics where rates of forest clearing are high. We examined how conversion of Amazon lowland tropical forest to cattle pasture influenced the physical and chemical structure, organic matter stocks and N cycling of small streams. We combined a regional ground survey of small streams with an intensive study of nutrient cycling using 15N additions in three representative streams: a second-order forest stream, a second-order pasture stream and a third-order pasture stream that were within several km of each other and on similar soils and landscape positions. Replacement of forest with pasture decreased stream habitat complexity by changing streams from run and pool channels with forest leaf detritus (50% cover) to grass-filled (63% cover) channel with runs of slow-moving water. In the survey, pasture streams consistently had lower concentrations of dissolved oxygen and nitrate (NO3-) compared with similar-sized forest streams. Stable isotope additions revealed that second-order pasture stream had a shorter NH4+ uptake length, higher uptake rates into organic matter components and a shorter 15NH4+ residence time than the second-order forest stream or the third-order pasture stream. Nitrification was significant in the forest stream (19% of the added 15NH4+) but not in the second-order pasture (0%) or third-order (6%) pasture stream. The forest stream retained 7% of added 15N in organic matter compartments and exported 53% (15NH4+ =34%; 15NO3- = 19%). In contrast, the second-order pasture stream retained 75% of added 15N, predominantly in grasses (69%) and exported only 4% as 15NH4+. The fate of tracer 15N in the third-order pasture stream more closely resembled that in the forest stream, with 5% of added N retained and 26% exported (15NH4+ = 9%; 15NO3- = 6%). These findings indicate that the widespread infilling by grass in small streams in areas deforested for pasture greatly increases the retention of inorganic N in the first- and second-order streams, which make up roughly three-fourths of total stream channel length in Amazon basin watersheds. The importance of this phenomenon and its effect on N transport to larger rivers across the larger areas of the Amazon Basin will depend on better evaluation of both the extent and the scale at which stream infilling by grass occurs, but our analysis suggests the phenomenon is widespread.This work was supported by grants from the NASA Large-Scale Biosphere and Atmosphere Experiment (NCC5-686), the National Science Foundation (DEB-0315656) and the Fundação de Ámparo à Pesquisa do Estado de São Paulo