SalienTime: User-driven Selection of Salient Time Steps for Large-Scale Geospatial Data Visualization

The voluminous nature of geospatial temporal data from physical monitors and simulation models poses challenges to efficient data access, often resulting in cumbersome temporal selection experiences in web-based data portals. Thus, selecting a subset of time steps for prioritized visualization and pre-loading is highly desirable. Addressing this issue, this paper establishes a multifaceted definition of salient time steps via extensive need-finding studies with domain experts to understand their workflows. Building on this, we propose a novel approach that leverages autoencoders and dynamic programming to facilitate user-driven temporal selections. Structural features, statistical variations, and distance penalties are incorporated to make more flexible selections. User-specified priorities, spatial regions, and aggregations are used to combine different perspectives. We design and implement a web-based interface to enable efficient and context-aware selection of time steps and evaluate its efficacy and usability through case studies, quantitative evaluations, and expert interviews.Comment: In Proceedings of the CHI Conference on Human Factors in Computing Systems (CHI'24), May 11-16, 2024, Honolulu, HI, US

Low Energy Electronic Recoils and Single Electron Detection with a Liquid Xenon Proportional Scintillation Counter

Liquid xenon (LXe) is a well-studied detector medium to search for rare events in dark matter and neutrino physics. Two-phase xenon time projection chambers (TPCs) can detect electronic and nuclear recoils with energy down to kilo-electron volts (keV). In this paper, we characterize the response of a single-phase liquid xenon proportional scintillation counter (LXePSC), which produces electroluminescence directly in the liquid, to detect electronic recoils at low energies. Our design uses a thin (10 - 25 $\mu$m diameter), central anode wire in a cylindrical LXe target where ionization electrons, created from radiation particles, drift radially towards the anode, and electroluminescence is produced. Both the primary scintillation (S1) and electroluminescence (S2) are detected by photomultiplier tubes (PMTs) surrounding the LXe target. Up to 17 photons are produced per electron, obtained with a 10 $\mu$m diameter anode wire, allowing for the highly efficient detection of electronic recoils from beta decays of a tritium source down to roughly 1 keV. Single electrons, from photo-emission of the cathode wires, are observed at a gain of 1.8 photoelectrons (PE) per electron. The delayed signals following the S2 signals are dominated by single-photon-like hits, without evidence for electron signals observed in the two-phase xenon TPCs. We discuss the potential application of such a LXePSC for reactor neutrino detection via Coherent Elastic Neutrino Nucleus Scattering (CE$\nu$NS).Comment: 18 pages, 17 figure

Extended state observer-based fault-tolerant control for an unmanned surface vehicle under asynchronous injection and deception attacks

This paper explores the problem of fault-tolerant control concerning an underactuated unmanned surface vehicle affected by actuator faults and disturbances in the physical layer and multiple cyber threats (time-varying delays, injection attacks, and deception attacks) in the networked layer. Firstly, an extended state observer is designed to estimate the relative state and fault information by constructing the estimation error term based on the output information affected by injection attack and delay. Secondly, a novel fault-tolerant controller is designed to deal with random Bernoulli deception attacks and compensate for time-varying delay and actuator faults by using the estimated information and considering the probability dynamics of deception attacks. Assuming that dual-channel asynchronous independent injection and deception attacks occur on the sensor-to-observer and observer-to-controller channels. A sufficient condition for asymptotic stability of the unmanned surface vehicle is derived by using Lyapunov-Krasovskii functional within the co-design framework of fault estimation and fault-tolerant control, and ensured by eliminat-ing the equality constraint. Finally, the efficacy of the proposed algorithm is assessed through simulations of the unmanned surface vehicle under two distinct scenarios: low forward speed and high forward speed

Relativistic Artificial Molecules Realized by Two Coupled Graphene Quantum Dots

Coupled quantum dots (QDs), usually referred to as artificial molecules, are important not only in exploring fundamental physics of coupled quantum objects, but also in realizing advanced QD devices. However, previous studies have been limited to artificial molecules with nonrelativistic fermions. Here, we show that relativistic artificial molecules can be realized when two circular graphene QDs are coupled to each other. Using scanning tunneling microscopy (STM) and spectroscopy (STS), we observe the formation of bonding and antibonding states of the relativistic artificial molecule and directly visualize these states of the two coupled graphene QDs. The formation of the relativistic molecular states strongly alters distributions of massless Dirac fermions confined in the graphene QDs. Because of the relativistic nature of the molecular states, our experiment demonstrates that the degeneracy of different angular-momentum states in the relativistic artificial molecule can be further lifted by external magnetic fields. Then, both the bonding and antibonding states are split into two peaks

Pig Coat Color Manipulation by MC1R Gene Editing

Black coat color in pigs is determined by the dominant E allele at the MC1R locus. Through comparing MC1R gene sequences between recessive e and dominant ED1 alleles, we identified four missense mutations that could affect MC1R protein function for eumelanin synthesis. With the aim of devising a genetic modification method for pig coat color manipulation, we mutated the e allele in the Duroc breed to the dominant ED1 allele using CRISPR-mediated homologous recombination for the four mutation substitutions at the MC1R locus. The MC1R-modified Duroc pigs generated using the allele replacement strategy displayed uniform black coat color across the body. A genotyping assay showed that the MC1R-modified Duroc pigs had a heterozygous ED1/e allele at the MC1R locus; in addition, the pigs remained in the Duroc genetic background. Our work offers a gene editing method for pig coat color manipulation, which could value the culture of new pig varieties meeting the needs of diversified market

Asymmetric [3+2]-Cycloaddition of Morita–Baylis–Hillman Carbonates with Maleimides Catalyzed by Chiral Ferrocenylphosphines

<div><p></p><p>New chiral ferrocenylphosphines <b>LB1</b>–<b>LB9</b> were designed and prepared through simple synthetic approaches. These air-stable ferrocenylphosphines were applied to promote asymmetric [3+2]-cycloaddition of Morita–Baylis–Hillman carbonates with maleimides, among which <b>LB7</b> was shown to have good catalytic activity to afford the corresponding multifunctional cyclopentenes in up to 59% yield and up to 53% <i>ee</i> under mild reaction conditions. A plausible reaction mechanism was proposed.</p> </div

Pig Coat Color Manipulation by <i>MC1R</i> Gene Editing

Black coat color in pigs is determined by the dominant E allele at the MC1R locus. Through comparing MC1R gene sequences between recessive e and dominant ED1 alleles, we identified four missense mutations that could affect MC1R protein function for eumelanin synthesis. With the aim of devising a genetic modification method for pig coat color manipulation, we mutated the e allele in the Duroc breed to the dominant ED1 allele using CRISPR-mediated homologous recombination for the four mutation substitutions at the MC1R locus. The MC1R-modified Duroc pigs generated using the allele replacement strategy displayed uniform black coat color across the body. A genotyping assay showed that the MC1R-modified Duroc pigs had a heterozygous ED1/e allele at the MC1R locus; in addition, the pigs remained in the Duroc genetic background. Our work offers a gene editing method for pig coat color manipulation, which could value the culture of new pig varieties meeting the needs of diversified market

Efficient and Safe Editing of Porcine Endogenous Retrovirus Genomes by Multiple-Site Base-Editing Editor

Gene-modified miniature pigs serve as alternative tissue and organ donors for xenotransplantation to alleviate the shortage of human allogenic organs. However, the high copy number of porcine endogenous retrovirus (PERV) genomes integrates with the porcine genome, which has a potential risk of cross-species transmission and hinders the clinical practice of xenotransplantation. Recently, CRISPR/Cas9 has been used to inactivate PERVs. However, Cas9 also triggers severe DNA damage at multiple integrated PERV sites in the porcine genome, which induces senescence and apoptosis of porcine cells. In this study, the cytosine base editor (CBE), an efficient and safe editor that does not cause DNA double strand breaks (DSBs), was used for PERV editing to reduce cytotoxic effects. Seven sgRNAs were set to target gag and pol loci of PERVs to induce premature stop codons. We found that approximately 10% of cell clones were completely inactivated for PERVs in pig ST cells, and the plasmid that was used for editing the PERVs did not integrate into host genome and influence the karyotype of the modified cells. Our studies offer a powerful and safe strategy for further generating PERV-knockout pigs using base editors

Dose-Dependent Outcome of EBV Infection of Humanized Mice Based on Green Raji Unit (GRU) Doses

Humanized mouse models are used as comprehensive small-animal models of EBV infection. Previously, infectious doses of EBV used in vivo have been determined mainly on the basis of TD50 (50% transforming dose), which is a time-consuming process. Here, we determined infectious doses of Akata-EBV-GFP using green Raji units (GRUs), and characterized dose-dependent effects in humanized mice. We defined two outcomes in vivo, including an infection model and a lymphoma model, following inoculation with low or high doses of Akata-EBV-GFP, respectively. Inoculation with a low dose induced primary B cells to become lymphoblastoid cell lines in vitro, and caused latent infection in humanized mice. In contrast, a high dose of Akata-EBV-GFP resulted in primary B cells death in vitro, and fatal B cell lymphomas in vivo. Following infection with high doses, the frequency of CD19+ B cells decreased, whereas the percentage of CD8+ T cells increased in peripheral blood and the spleen. At such doses, a small part of activated CD8+ T cells was EBV-specific CD8+ T cells. Thus, GRUs quantitation of Akata-EBV-GFP is an effective way to quantify infectious doses to study pathologies, immune response, and to assess (in vivo) the neutralizing activity of antibodies raised by immunization against EBV