1,550 research outputs found
A water-soluble tetraazaperopyrene dye as strong G-quadruplex DNA binder
The interactions of the water-soluble tetraazaperopyrene dye 1 with ct-DNA, duplex-[(dAdT)12⋅(dAdT)12], duplex-[(dGdC)12⋅(dGdC)12] as well as with two G-quadruplex-forming sequences, namely the human telomeric 22AG and the promotor sequence c-myc, were investigated by means of UV/visible and fluorescence spectroscopy, isothermal titration calorimetry (ITC) and molecular docking studies. Dye 1 exhibits a high affinity for G-quadruplex structures over duplex DNA structures. Furthermore, the ligand shows promising G-quadruplex discrimination, with an affinity towards c-myc of 2×107 m−1 (i.e., Kd=50 nm), which is higher than for 22AG (4×106 m−1). The ITC data reveal that compound 1 interacts with c-myc in a stoichiometric ratio of 1:1 but also indicate the presence of two identical lower affinity secondary binding sites per quadruplex. In 22AG, there are two high affinity binding sites per quadruplex, that is, one on each side, with a further four weaker binding sites. For both quadruplex structures, the high affinity interactions between compound 1 and the quadruplex-forming nucleic acid structures are weakly endothermic. Molecular docking studies suggest an end-stacking binding mode for compound 1 interacting with quadruplex structures, and a higher affinity for the parallel conformation of c-myc than for the mixed-hybrid conformation of 22AG. In addition, docking studies also suggest that the reduced affinity for duplex DNA structures is due to the non-viability of an intercalative binding mode
Psychological correlates to dysfunctional eating patterns among morbidly obese patients accepted for bariatric surgery
Objective: To examine the relationships between dysfunctional eating patterns, personality, anxiety and depression in morbidly obese patients accepted for bariatric surgery. Design: The study used cross-sectional data collected in running a randomized controlled trial (http://clinicaltrials.gov/ct2/show/NCT01403558). Subjects: A total of 102 patients (69 women, 33 men) with a mean (SD) age of 42.6 (9.8) years and a mean BMI 43.5 (4.4) kg/m2 participated. Measurements: Measurements included the NEO PI-R (personality: neuroticism, extroversion, openness, conscientiousness and agreeableness), the TFEQ R-21 (dysfunctional eating: emotional eating (EE), uncontrolled eating (UE) and cognitive restraint of eating (CR) and the HADS (anxiety and depression). Results: The personality traits neuroticism and conscientiousness were more strongly correlated with dysfunctional eating compared with anxiety and depression. These differences were most pronounced for emotional and cognitive restraint of eating. Emotional eating occurred more often in female than male patients, a finding that was partially mediated by neuroticism but not by anxiety and depression. Conclusion: Personality traits may be important to address in the clinical management of morbidly obese patients seeking bariatric surgery as neuroticism is particularly salient in female patients displaying an emotional eating behaviour
The Detection and Location of Hydrido Ligands in High Nuclearity Osmium and Ruthenium Carbonyl Clusters: A Critical Survey
Hydrido carbonyl clusters represent powerful molecular models for the co-adsorption of carbon monoxide and hydrogen on metal surfaces, a key step in several catalytic processes. Over the past two decades a considerable number of such species have been reported in the literature. In this paper, the structural chemistry of high nuclearity osmium and ruthenium hydrido carbonyl clusters is critically reviewed. Particular emphasis is placed on the limits of the various indirect methods of hydride location in clusters, and an alternative interpretation of the results of spectroscopic studies performed for samples of some Ru and Os clusters in solution is given
Spectral Properties and Synchronization in Coupled Map Lattices
Spectral properties of Coupled Map Lattices are described. Conditions for the
stability of spatially homogeneous chaotic solutions are derived using linear
stability analysis. Global stability analysis results are also presented. The
analytical results are supplemented with numerical examples. The quadratic map
is used for the site dynamics with different coupling schemes such as global
coupling, nearest neighbor coupling, intermediate range coupling, random
coupling, small world coupling and scale free coupling.Comment: 10 pages with 15 figures (Postscript), REVTEX format. To appear in
PR
Some generic aspects of bosonic excitations in disordered systems
We consider non-interacting bosonic excitations in disordered systems,
emphasising generic features of quadratic Hamiltonians in the absence of
Goldstone modes. We discuss relationships between such Hamiltonians and the
symmetry classes established for fermionic systems. We examine the density
\rho(\omega) of excitation frequencies \omega, showing how the universal
behavior \rho(\omega) ~ \omega^4 for small \omega can be obtained both from
general arguments and by detailed calculations for one-dimensional models
Improved Fusion Reactor Designs as per Integration of Advanced Physics and Technology Systems Code Modules
Accuracy of B(E2; 0+ -> 2+) transition rates from intermediate-energy Coulomb excitation experiments
The method of intermediate-energy Coulomb excitation has been widely used to
determine absolute B(E2; 0+ -> 2+) quadrupole excitation strengths in exotic
nuclei with even numbers of protons and neutrons. Transition rates measured
with intermediate-energy Coulomb excitation are compared to their respective
adopted values and for the example of 26Mg to the B(E2; 0+ -> 2+) values
obtained with a variety of standard methods. Intermediate-energy Coulomb
excitation is found to have an accuracy comparable to those of long-established
experimental techniques.Comment: to be published in Phys. Rev.
Enhanced collectivity in 74Ni
The neutron-rich nucleus 74Ni was studied with inverse-kinematics inelastic
proton scattering using a 74Ni radioactive beam incident on a liquid hydrogen
targetat a center-of-mass energy of 80 MeV. From the measured de-excitation
gamma-rays, the population of the first 2+ state was quantified. The
angle-integrated excitation cross section was determined to be 14(4) mb. A
deformation length of delta = 1.04(16) fm was extracted in comparison with
distorted wave theory, which suggests that the enhancement of collectivity
established for 70Ni continues up to 74Ni. A comparison with results of shell
model and quasi-particle random phase approximation calculations indicates that
the magic character of Z = 28 or N = 50 is weakened in 74Ni
Is the structure of 42Si understood?
A more detailed test of the implementation of nuclear forces that drive shell
evolution in the pivotal nucleus \nuc{42}{Si} -- going beyond earlier
comparisons of excited-state energies -- is important. The two leading
shell-model effective interactions, SDPF-MU and SDPF-U-Si, both of which
reproduce the low-lying \nuc{42}{Si}() energy, but whose predictions for
other observables differ significantly, are interrogated by the population of
states in neutron-rich \nuc{42}{Si} with a one-proton removal reaction from
\nuc{43}{P} projectiles at 81~MeV/nucleon. The measured cross sections to the
individual \nuc{42}{Si} final states are compared to calculations that combine
eikonal reaction dynamics with these shell-model nuclear structure overlaps.
The differences in the two shell-model descriptions are examined and linked to
predicted low-lying excited states and shape coexistence. Based on the
present data, which are in better agreement with the SDPF-MU calculations, the
state observed at 2150(13)~keV in \nuc{42}{Si} is proposed to be the ()
level.Comment: accepted in Physical Review Letter
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