Biosecurity capacity building for the Australian avocado industry: Laurel Wilt

Ambrosia beetles share one special feature with humans, the ability to farm. These weevil-sized beetles colonize wood but rather than consuming this rather nutrient-poor material, they inoculate the tree with a particular type of fungus, which then becomes the food for the beetle larvae. Many tree species have evolved specialized chemical defences against this type of insect infestation and normally the fungal symbiont is only weakly pathogenic. However, there are some notable exceptions to this rule where perfectly healthy trees have succumbed to ambrosia beetle infestation and their fungal symbionts have acted as aggressive pathogens. One classic example occurs in the south-eastern states of the USA, where cultivated avocado and its wild relatives are afflicted by a lethal disease called laurel wilt. The culprit is the beetle Xyleborus glabratus, which transmits the fungus Raffaelea lauricola. X. glabratus is native to Asia and entered the USA as a stowaway in wooden crates. X. glabratus is considered one of the most serious biosecurity threats to the Australian avocado industry. In a pre-emptive move to prevent X. glabratus entering Australia, scientists from Brisbane have visited their counterparts in the USA to learn about laurel wilt disease. As a result of this collaboration, a diagnostic manual for laurel wilt has been produced, which will become the national standard for Australia. During preparation of this manual, new molecular diagnostic assays for both X. glabratus and R. lauricola were developed. Armed with these new assays, ambrosia beetle surveys were done in subtropical and tropical avocado production areas of the east coast of Australia and thankfully no X. glabratus found, confirming Australia’s pest-free status. However, there is no room for complacency, as two more ambrosia beetle species were discovered (Euwallacea sp. aff. fornicatus and Microperus sp.) were found on the Sunshine Coast and Atherton Tablelands in Queensland. Infestations of these beetles were associated with avocado canopy thinning and most likely yield loss. The fungal symbionts of these ambrosia beetles were isolated and shown to be new species in the genera Fusarium and Bionectria. When pure cultures of these fungi were injected into the stems of young avocado plants, large brown lesions were produced in the sapwood, confirming that these fungi were causing disease

A new badnavirus in Ribes species, its detection by PCR, and its close association with gooseberry vein banding disease

Gooseberry vein banding disease (GVBD) affects Ribes species and cultivars worldwide. It is the second most important virus-like disease in these crops after black currant reversion disease. In this paper, we describe a bacilliform virus, Gooseberry vein banding associated virus (GVBAV), which is associated closely with GVBD, and provide evidence that GVBAV is a distinct species within the genus Badnavirus. Purified GVBAV particles were ca. 120 × 30 nm in size and contained dsDNA. The sequence of a 1.5-kb DNA fragment amplified from viral genomic DNA was similar to those of a wide range of badnaviruses and contained motifs characteristic of the RNase H domain of the badnavirus open reading frame (ORF) III polyprotein. Phylogenetic analyses suggest that GVBAV is most closely related to Spiraea yellow leaf spot virus. Using sequence derived from the polymerase chain reaction (PCR)-amplified DNA fragment, virus-specific primers were designed. These primers were used in PCR to assay for GVBAV in a range of Ribes germplasm affected with GVBD, with other unrelated virus-like diseases and viruses found in Ribes, and in healthy plants. GVBAV was detected in all of 58 GVBD-affected plants from diverse sources, but not from healthy Ribes plants nor from plants infected with other viruses

Διερεύνηση Πλημυρικής Κατάκλυσης σε συνθήκες μη μόνιμης ροής με τη χρήση Λογισμικών Υδραυλικής Προσομοίωση. Εφαρμογή στον Πηνειό Θεσσαλίας.

Εθνικό Μετσόβιο Πολυτεχνείο--Μεταπτυχιακή Εργασία. Διεπιστημονικό-Διατμηματικό Πρόγραμμα Μεταπτυχιακών Σπουδών (Δ.Π.Μ.Σ.) “Επιστήμη και Τεχνολογία Υδατικών Πόρων

Detection of two poleroviruses infecting garlic (Allium sativum) in Australia

Two near complete polerovirus genomes were assembled using high throughput sequencing (HTS) data from two separate samples of garlic cultivar ‘Glenlarge’ grown in Gatton, Queensland, Australia. Whole genome sequence comparisons showed that one contig shared 96.7% nucleotide identity with phasey bean mild yellows virus (MT966032.1) and the other, 99.8% nucleotide identity with turnip yellows virus (MT586581.1). Phylogenetic analyses further revealed that the isolates fell within the PBMYV group 2 and TuYV group 2 clades, respectively. This is the first report of these poleroviruses infecting garlic

Sugarcane mosaic virus infects Stenotaphrum secundatum in Australia

This study presents the first report of sugarcane mosaic virus (SCMV) infecting Stenotaphrum secundatum (buffalo grass) in Australia, from a turf farm in the Hunter Valley, New South Wales. The plant displayed mosaic symptoms and contained flexuous, filamentous virions of 700–750 × 10–11 nm typical of members of the genus Potyvirus. Infection of the sample by SCMV was confirmed by double antibody sandwich ELISA and RT-PCR amplification of the coat protein coding region of the viral genome. In a phylogenetic analysis, the buffalo grass isolate was sister to a clade of maize-infecting isolates of SCMV from eastern Africa and was 75.8% and 79.4% identical to the exemplar isolate of SCMV at nucleotide and amino acid levels, respectively

Presence and distribution of banana bunchy top virus in Laos

Banana bunchy top virus is reported for the first time in Laos. Infected plants showed typical disease symptoms and the two complete genome sequences reported place the isolates in the Southeast Asian subgroup