Draft genome sequences of three multiantibiotic-resistant Campylobacter jejuni strains (2865, 2868, and 2871) isolated from poultry at retail outlets in Malaysia

Campylobacter jejuni is a frequent cause of human bacterial gastrointestinal foodborne disease worldwide. Antibiotic resistance in this species is of public health concern. The draft genome sequences of three multiantibiotic-resistant C. jejuni strains (2865, 2868, and 2871) isolated from poultry at retail outlets in Malaysia are presented here

Characterization of Shiga Toxigenic Escherichia coli O157 and Non-O157 Isolates from Ruminant Feces in Malaysia

Shiga toxigenic Escherichia coli (STEC) O157 and several other serogroups of non-O157 STEC are causative agents of severe disease in humans world-wide. The present study was conducted to characterize STEC O157 and non-O157 serogroups O26, O103, O111, O121, O45, and O145 in ruminants in Malaysia. A total of 136 ruminant feces samples were collected from 6 different farms in Peninsular Malaysia. Immunomagnetic beads were used to isolate E. coli O157 and non-O157 serogroups, while PCR was used for the detection and subtyping of STEC isolates. STEC O157:H7 was isolated from 6 (4%) feces samples and all isolates obtained carried stx2c,  eaeA-γ1, and ehxA. Non-O157 STEC was isolated from 2 (1.5%) feces samples with one isolate carrying stx1a, stx2a, stx2c, and ehxA and the other carrying stx1a alone. The presence of STEC O157 and non-O157 in a small percentage of ruminants in this study together with their virulence characteristics suggests that they may have limited impact on public health

Inhibition of attachment of oral bacteria to immortalized human gingival fibroblasts (HGF-1) by tea extracts and tea components

Background: Tea has been suggested to promote oral health by inhibiting bacterial attachment to the oral cavity. Most studies have focused on prevention of bacterial attachment to hard surfaces such as enamel. Findings: This study investigated the effect of five commercial tea (green, oolong, black, pu-erh and chrysanthemum) extracts and tea components (epigallocatechin gallate and gallic acid) on the attachment of five oral pathogens (Streptococcus mutans ATCC 25175, Streptococcus mutans ATCC 35668, Streptococcus mitis ATCC 49456, Streptococcus salivarius ATCC 13419 and Actinomyces naeslundii ATCC 51655) to the HGF-1 gingival cell line. Extracts of two of the teas (pu-erh and chrysanthemum) significantly (p < 0.05) reduced attachment of all the Streptococcus strains by up to 4 log CFU/well but effects of other teas and components were small. Conclusions: Pu-erh and chrysanthemum tea may have the potential to reduce attachment of oral pathogens to gingival tissue and improve the health of oral soft tissues

The Use of Interdisciplinary Approaches to Understand the Biology of Campylobacter jejuni

Funding Information: This work was supported by a scholarship grant from the University of Aberdeen and Curtin University.Peer reviewedPublisher PD

Unveiling the Mechanisms for Campylobacter jejuni Biofilm Formation Using a Stochastic Mathematical Model

Peer reviewe

Challenges of biofilm control and utilization : lessons from mathematical modelling

Funding This work was supported by a scholarship grant from the School of Natural and Computing Sciences at the University of Aberdeen and the Faculty of Health Sciences at Curtin University.Peer reviewedPostprin

Systematic review and meta‐analysis of the impact of decontamination interventions on the prevalence and concentration of Salmonella in broiler chickens during primary processing

SummarySystematic review and meta‐analysis aggregate quantitative data from different studies into unified effect size estimates with better statistical power in risk assessment model parameterisation. This study uses systematic review and meta‐analysis to estimate Salmonella decontamination during broiler slaughter from scalding to post‐chilling, with meta‐regression applied to explore modifier variables. Data from 161 studies published between 1998 and 2022 was extracted from thirty‐five articles identified in the systematic review process with meta‐analysis and meta‐regression performed using the metafor package (version 2.0‐0) in R statistical environment (version 3.6.0). The analysis revealed carcass wash (1.31 log$_{10}$ CFU/carcass reduction in odds; P < 0.01) and chilling (121.50% reduction in relative risk; P < 0.01) had significant reduction on Salmonella concentration and prevalence, respectively. Chemical additives reduced the concentration (0.98 log$_{10}$ CFU/carcass; P < 0.01) and prevalence (64.74% relative risk; P < 0.01) but the efficacy of physical methods was not conclusive. Application of decontaminants through immersion was superior (0.90 log$_{10}$ CFU/carcass; P < 0.01) to spraying (0.72 log$_{10}$ CFU/carcass; P < 0.01). Adjusting the pH sequentially of electrolysed water, acetic acid and trisodium phosphate reduced the odds of Salmonella concentration by more than 2 log cycles and the relative risk by more than 100%. The results provide trends in the concentration and prevalence of Salmonella during the broilers slaughter process with application of decontamination interventions and provide a basis for control decision‐making and quantitative microbial risk assessment

Technology-Enabled Health Care Collaboration in Pediatric Chronic Illness: Pre-post Interventional Study for Feasibility, Acceptability, and Clinical Impact of an Electronic Health Record–Linked Platform for Patient-Clinician Partnership

Background: Mobile health (mHealth) technology has the potential to support the Chronic Care Model\u27s vision of closed feedback loops and patient-clinician partnerships. Objective: This study aims to evaluate the feasibility, acceptability, and short-term impact of an electronic health record-linked mHealth platform (Orchestra) supporting patient and clinician collaboration through real-time, bidirectional data sharing. Methods: We conducted a 6-month prospective, pre-post, proof-of-concept study of Orchestra among patients and parents in the Cincinnati Children\u27s Hospital inflammatory bowel disease (IBD) and cystic fibrosis (CF) clinics. Participants and clinicians used Orchestra during and between visits to complete and view patient-reported outcome (PRO) measures and previsit plans. Surveys completed at baseline and at 3- and 6-month follow-up visits plus data from the platform were used to assess outcomes including PRO completion rates, weekly platform use, disease self-efficacy, and impact on care. Analyses included descriptive statistics; pre-post comparisons; Pearson correlations; and, if applicable, effect sizes. Results: We enrolled 92 participants (CF: n = 52 and IBD: n = 40), and 73% (67/92) completed the study. Average PRO completion was 61%, and average weekly platform use was 80%. Participants reported improvement in self-efficacy from baseline to 6 months (7.90 to 8.44; P = .006). At 6 months, most participants reported that the platform was useful (36/40, 90%) and had a positive impact on their care, including improved visit quality (33/40, 83%), visit collaboration (35/40, 88%), and visit preparation (31/40, 78%). PRO completion was positively associated with multiple indicators of care impact at 3 and 6 months. Conclusions: Use of an mHealth tool to support closed feedback loops through real-time data sharing and patient-clinician collaboration is feasible and shows indications of acceptability and promise as a strategy for improving pediatric chronic illness management

The microbial genetic diversity and succession associated with processing waters at different broiler processing stages in an abattoir in Australia

DATA AVAILABILITY STATEMENT : The data presented in this study are available upon request from the corresponding author.The high organic content of abattoir-associated process water provides an alternative for low-cost and non-invasive sample collection. This study investigated the association of microbial diversity from an abattoir processing environment with that of chicken meat. Water samples from scalders, defeathering, evisceration, carcass-washer, chillers, and post-chill carcass rinsate were collected from a large-scale abattoir in Australia. DNA was extracted using theWizard® Genomic DNA Purification Kit, and the 16S rRNA v3-v4 gene region was sequenced using Illumina MiSeq. The results revealed that the Firmicutes decreased from scalding to evisceration (72.55%) and increased with chilling (23.47%), with the Proteobacteria and Bacteroidota changing inversely. A diverse bacterial community with 24 phyla and 392 genera was recovered from the post-chill chicken, with Anoxybacillus (71.84%), Megamonas (4.18%), Gallibacterium (2.14%), Unclassified Lachnospiraceae (1.87%), and Lactobacillus (1.80%) being the abundant genera. The alpha diversity increased from scalding to chilling, while the beta diversity revealed a significant separation of clusters at different processing points (p = 0.01). The alpha- and beta-diversity revealed significant contamination during the defeathering, with a redistribution of the bacteria during the chilling. This study concluded that the genetic diversity during the defeathering is strongly associated with the extent of the post-chill contamination, and may be used to indicate the microbial quality of the chicken meat.The Australia Africa University Network- Australia Awards Africa and the University of Pretoria Postdoctoral Fellowship grants.https://www.mdpi.com/journal/pathogensam2024Biochemistry, Genetics and Microbiology (BGM)Consumer ScienceForestry and Agricultural Biotechnology Institute (FABI)SDG-02:Zero Hunge

Systematic review and meta-analysis of the impact of decontamination interventions on the prevalence and concentration of Salmonella in broiler chickens during primary processing

DATA AVAILABILITY STATEMENT: Data available in article supplementary material.SUPPORTING INFORMATION: Data S1: Supplementary data on the systematic review on decontamination interventions on the prevalence and concentration of Salmonella in broiler chickens during primary processing.Please read abstract in article.This work was partly supported by the Australia Africa University Network- Australian Awards Africa Postdoctoral fellowship and the University of Pretoria Postdoctoral Fellowship grants.https://ifst.onlinelibrary.wiley.com/journal/13652621Consumer ScienceFood ScienceSDG-02:Zero HungerSDG-03:Good heatlh and well-bein