Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data

Freezing transitions of Brownian particles in confining potentials

8 figuresInternational audienceAbstract We study the mean first passage time (MFPT) to an absorbing target of a one-dimensional Brownian particle subject to an external potential v ( x ) in a finite domain. We focus on the cases in which the external potential is confining, of the form v ( x ) = k | x − x 0 | n / n , and where the particle’s initial position coincides with x 0 . We first consider a particle between an absorbing target at x = 0 and a reflective wall at x = c . At fixed x 0 , we show that when the target distance c exceeds a critical value, there exists a nonzero optimal stiffness k opt that minimizes the MFPT to the target. However, when c lies below the critical value, the optimal stiffness k opt vanishes. Hence, for any value of n , the optimal potential stiffness undergoes a continuous ‘freezing’ transition as the domain size is varied. On the other hand, when the reflective wall is replaced by a second absorbing target, the freezing transition in k opt becomes discontinuous. The phase diagram in the ( x 0 , n )-plane then exhibits three dynamical phases and metastability, with a ‘triple’ point at ( x 0 / c ≃ 0.171 85, n ≃ 0.395 39). For harmonic or higher order potentials ( n ⩾ 2), the MFPT always increases with k at small k , for any x 0 or domain size. These results are contrasted with problems of diffusion under optimal resetting in bounded domains

Trace Element and U–Pb Core Age for Zircons from Western Meiganga Gold Placer, Cameroon: Their Genesis and Archean-Proterozoic Sources

Trace element concentrations and U–Pb ages were obtained using Laser Ablation Split Stream Method from the core of 115 zircon grains from the western Meiganga gold placer deposit. The data was used to characterize zircon, to understand the history of crystallization and to locate source rocks within the local and regional geological settings. Zircon trace element geochemistry was used to distinguish between magmatic and metamorphic affinity. The magmatic zircons have characteristics compatible with their probable origin from granitoid, syenite, tonalite, charnockite and mafic to ultramafic rocks. The metamorphic zircons composition is compatible with growth from anatectic melts and by sub-solidus crystallization in equilibrium with garnet. The zircon ages reveal Archean, Paleoproterozoic, Mesoproterozic, and Neoproterozoic events with the principal source could mainly belong to Paleoproterozoic magmatic lineage. Some of the Paleoproterozoic magmatic zircons were probably sourced from two mica granite found within the local geology, whereas the remaining zircons have features indicating source rocks within the Congo Craton. We suggest that the geologic history of these zircons is related to crustal-scale magmatic and/or tectono-metamorphic events, possibly linked to Eburnean and Pan-African orogeny

Improving Properties of Starch-Based Adhesives with Carboxylic Acids and Enzymatically Polymerized Lignosulfonates

A novel strategy for improving wet resistance and bonding properties of starch-based adhesives using enzymatically polymerized lignosulfonates and carboxylic acids as additives was developed. Therefore, lignosulfonates were polymerized by laccase to a molecular weight of 750 kDa. Incorporation of low concentrations (up to 1% of the starch weight) of 1,2,3,4-butanetetracarboxylic acid (BTCA) led to further improvement on the properties of the adhesives, while addition of greater amounts of BTCA led to a decrease in the properties measured due to large viscosity increases. Great improvements in wet-resistance from 22 to 60 min and bonding times (from 30 to 20 s) were observed for an adhesive containing 8% enzymatically polymerized lignin and 1% BTCA. On the other hand, the addition of citric acid (CA) deteriorated the properties of the adhesives, especially when lignosulfonate was present. In conclusion, this study shows that the addition of the appropriate amount of enzymatically polymerized lignosulfonates together with carboxylic acids (namely BTCA) to starch-based adhesives is a robust strategy for improving their wet resistance and bonding times

Human tau-overexpressing mice recapitulate brainstem involvement and neuropsychiatric features of early Alzheimer’s disease

Abstract Alzheimer’s disease (AD) poses an ever-increasing public health concern as the population ages, affecting more than 6 million Americans. AD patients present with mood and sleep changes in the prodromal stages that may be partly driven by loss of monoaminergic neurons in the brainstem, but a causal relationship has not been firmly established. This is due in part to a dearth of animal models that recapitulate early AD neuropathology and symptoms. The goal of the present study was to evaluate depressive and anxiety-like behaviors in a mouse model of AD that overexpresses human wild-type tau (htau) prior to the onset of cognitive impairments and assess these behavior changes in relationship to tau pathology, neuroinflammation, and monoaminergic dysregulation in the dorsal raphe nucleus (DRN) and locus coeruleus (LC). We observed depressive-like behaviors at 4 months in both sexes and hyperlocomotion in male htau mice. Deficits in social interaction persisted at 6 months and were accompanied by an increase in anxiety-like behavior in males. The behavioral changes at 4 months coincided with a lower density of serotonergic (5-HT) neurons, downregulation of 5-HT markers, reduced excitability of 5-HT neurons, and hyperphosphorylated tau in the DRN. Inflammatory markers were also upregulated in the DRN along with protein kinases and transglutaminase 2, which may promote tau phosphorylation and aggregation. Loss of 5-HT innervation to the entorhinal cortex and dentate gyrus of the hippocampus was also observed and may have contributed to depressive-like behaviors. There was also reduced expression of noradrenergic markers in the LC along with elevated phospho-tau expression, but this did not translate to a functional change in neuronal excitability. In total, these results suggest that tau pathology in brainstem monoaminergic nuclei and the resulting loss of serotonergic and/or noradrenergic drive may underpin depressive- and anxiety-like behaviors in the early stages of AD