34 research outputs found
Antigenic, Immunologic and Genetic Characterization of Rough Strains B.abortus RB51, B.melitensis B115 and B.melitensis B18
The lipopolysaccharide (LPS) is considered the major virulent factor in Brucella spp. Several genes have been identified involved in the synthesis of the three LPS components: lipid A, core and O-PS. Usually, Brucella strains devoid of O-PS (rough mutants) are less virulent than the wild type and do not induce undesirable interfering antibodies. Such of them proved to be protective against brucellosis in mice. Because of these favorable features, rough strains have been considered potential brucellosis vaccines. In this study, we evaluated the antigenic, immunologic and genetic characteristics of rough strains B.abortus RB51, B.melitensis B115 and B.melitensis B18. RB51 derived from B.abortus 2308 virulent strain and B115 is a natural rough strain in which the O-PS is present in the cytoplasm. B18 is a rough rifampin-resistan mutant isolated in our laboratory
Molecular characterisation of human hepatitis E virus from Italy: comparative analysis of five reverse transcription-PCR assays
Caratterizzazione di virus enterici dell’Adriatico Centrosettentrionale mediante tecniche di biologia molecolare
Molecular and biological characterization of poliovirus 3 strains isolated in adriatic seawater samples
ÐIn a previous study [Muscillo, M., Carducci, A., La Rosa, G., Cantiani, L., Marianelli, C.
(1997a) Enteric virus detection in adriatic seawater by cell culture, polymerase chain reaction and poly-
acrylamide gel electrophoresis. Water Res. 31, 1980±1984] enterovirus strains were isolated from Adria-
tic seawater and estuarine water from the Foglia River, by infecting susceptible cells with ultra®ltrated
water samples. In the present work we have studied three of those samples, in which routine reverse
transcriptase±polymerase chain reaction (RT±PCR) and sequencing analysis had identi®ed the presence
of poliovirus type 3 (P3). In order to better estimate the risk to human health of such occurrence in
bathing water (having bacteriological standards in line with the EEC directive 76/160), we set up a pro-
tocol to distinguish wild from Sabin P3 strains. Three sets of RT±PCR primers were engineered and
their predicted products were: 593 nucleotides (nt) in the 5' noncoding (5'NC) region (11±603), 350 nt
at the Vp3±Vp1 junction (2438±2787) of the capside protein genes, and 420 nt in the 2C (4209±4628)
region, which is regarded as the hotspot of recombinant polioviruses. Eight reference ATCC strains,
whose sequences were known, were also tested under the same experimental conditions in order to ver-
ify the accuracy of the RT±PCR reactions. The amplicons were directly sequenced by Big-dye2 termin-
ator sequencing using a capillary automatic sequencer. The latter two regions found the same viral
species Polio 3 in all the sample strains, with no meaningful distinction between P3/Leon/37 and P3/
Leon/12a1b, the vaccine strain. The analyses in the 5'NC region were more useful, where genetic re-
lationships and the predicted secondary structure suggested that the viruses were of vaccinal sources.
Molecular data were con®rmed by in vitro phenotypic marker tests rct/40, where all the examined
samples displayed a temperature sensitive phenotype rct/40(ÿ). Our results suggest that the 472U4C
transition alone, is not a predictive marker of reversion to neurovirulence. Finally, we conclude that the
220U constantly found in the consensus sequences of the samples can serve as a good predictor of rct/
40(ÿ) phenotype
Enteric virus detection in Adriatic seawater by cell culture, Polymerase Chain Reaction and Polyacrilamide Gel Electrophoresis assays
Abstract--Forty samples of sea and estuary water were collected from a 40 km strip along the Adriatic
coast of Italy between June 1994 and September 1995. Each sample consisted of t0 1 of water. Routine
bacteriological analyses were carried out and viral particles concentrated on cross-flow membranes; the
concentrated water samples, equally divided into two parts, were used to infect both BGM and Hep-2
cells. Lysates from all cell cultures were further tested for the presence of enteroviruses by
reverse-transcribed polymerase chain reaction (RT-PCR) and reoviruses by polyacrylamide gel
eleetrophoresis (PAGE).
The results showed widespread viral contamination of the waters tested, particularly in late summer.
Under our experimental conditions, BGM cells were more efficient than Hep-2 in recovering viruses. In
fact, enteroviruses were detected in up to 33% and reoviruses in 80% of BGM infected with seawater,
compared to 8% and 53%, respectively, for the Hep-2 cells. In estuarine samples, enteroviruses were
detected in 30% and reovirus in 54% of BGM, compared to 23% and 30% of Hep-2. Twenty nine out
of 40 samples showed the presence of infectious particles on the basis of the CPE appearance; after
identification of the isolated viruses, only 13 turned out to be specifically contaminated by enteroviruses.
Of the latter, five were below the bacteriological standards set by the Italian legislation in line with the
EEC Directive 76/160 IEEC for bathing waters
La RT-PCR e la PAGE nell'identificazione di enterovirus e Reovirus: esperienza relativa ad uno studio condotto sulle acque del Mare Adriatico
Enteric virus detection in Adriatic seawater by sequential cell culture, Polymerase Chain Reaction and Polyacrilamide Gel Electrophoresis assays.
Molecular analysis of poliovirus 3 isolated from an aerosol generated by a wastewater treatment plant
We examined three samples of lysates from cell cultures that had previously been infected by
the aerosol generated by a waste water treatment plant near Pisa. We first attempted to confirm that we
were dealing with one of the enterovirus family, using an inverse PCR analysis of the RNA extracted from
the cell lysates. This identified a single genome sequences in all the samples, which corresponded to
poliovirus 3. Sequence analyses revealed that the genotyping of poliovirus 3 was accurate for the species,
irrespective of the genomic region sequenced. Subspecies genotyping is only possible for the translated
region, and in this case, it identified the Poliovirus type 3 Leon 12alb strain as ancestor of the virus
isolated. Molecular analyses were then carried out on the wild virus in the regions VP2 (9623 bp), VP3
(922bp) and VPI (l128bp) and found various nucleotide mutations (e.g. 472T~C; 970C~C.Cys,S,;
! 3196~r, Val.t,,u; 1743r~c. Va~A~a; 1817C~X. Hys~ryr). Thermosensitivity tests at 34°C and 44°C showed a slight
reversion to the heat resistant phenotype. The need for adequate protective measures for plant staff,
together with the frequent use of treated water for irrigation, means that effective methods of aerosol borne pathogen detection and risk determination must be adopted