Seasonal nitrogen uptake and regeneration in the western coastal Arctic

Here, we present the first study to investigate the seasonal importance of amino acid-nitrogen (N) to Arctic near shore microbial communities. We measured primary productivity and the uptake of ammonium, nitrate, urea, and amino acids in two size fractions (\u3e 3 m and approximately 0.7-3 m), as well as ammonium regeneration and nitrification using N-15 and C-13 tracer approaches in the near-shore waters of the Chukchi Sea, during January, April, and August for two consecutive years. At discrete depths, nitrate comprised 46-78% of the total dissolved N pool during January and April but only 2-6% during August. Dissolved organic N (DON) concentrations increased between January and August though the carbon (C):N (mol:mol) of the DON pool declined. Of the substrates tested, amino acids supported the bulk of both N and C nutrition in both size fractions during January and April (ice-covered). Urea generally had the lowest uptake rate under ice-covered conditions; uptake of urea-C was only detectable in August. Though previous Arctic studies focused largely on nitrate, we found nitrate uptake was generally lower than other substrates tested. The sharp decline in nitrate concentration between April and August, however, indicates a drawdown of nitrate during that period. Rates of ammonium uptake were highest in August, when it was the dominant N substrate used. During all sample periods, rates of ammonium regeneration were sufficient to supply ammonium demand. Rates of nitrification varied between sample periods, however, with much higher rates seen in January and April

Extracerebral metastases determine the outcome of patients with brain metastases from renal cell carcinoma

<p>Abstract</p> <p>Background</p> <p>In the era of cytokines, patients with brain metastases (BM) from renal cell carcinoma had a significantly shorter survival than patients without. Targeted agents (TA) have improved the outcome of patients with metastatic renal cell carcinoma (mRCC) however, their impact on patients with BM is less clear. The aim of this analysis was to compare the outcome of patients with and without BM in the era of targeted agents.</p> <p>Methods</p> <p>Data from 114 consecutive patients who had access to targeted agent were analyzed for response rates (ORR), progression free survival (PFS) and overall survival (OS). All patients diagnosed with BM underwent local, BM-specific treatment before initiation of medical treatment.</p> <p>Results</p> <p>Data of 114 consecutive patients who had access to at least one type of targeted agents were analyzed. Twelve out of 114 renal cell carcinoma (RCC) patients (10.5%) were diagnosed with BM. Systemic treatment consisted of sunitinib, sorafenib, temsirolimus or bevacizumab. The median PFS was 8.7 months (95% CI 5.1 - 12.3) and 11.4 months (95% CI 8.7 - 14.1) for BM-patients and non-BM-patients, respectively (p = 0.232). The median overall survival for patients with and without BM was 13.4 (95% CI 1- 43.9) and 33.3 months (95% CI 18.6 - 47.0) (p = 0.358), respectively. No patient died from cerebral disease progression. ECOG Performance status and the time from primary tumor to metastases (TDM) were independent risk factors for short survival (HR 2.74, p = 0.001; HR: 0.552, p = 0.034).</p> <p>Conclusions</p> <p>Although extracerebral metastases determine the outcome of patients with BM, the benefit from targeted agents still appears to be limited when compared to patients without BM.</p

Nitrogen uptake by phytoplankton and bacteria during an induced Phaeocystis pouchetii bloom, measured using size fractionation and flow cytometric sorting

Uptake of inorganic and organic nitrogen (N) by phytoplankton and bacteria was investigated during a mesocosm study conducted in Raunefjord, Norway in April 2005. One mesocosm was fertilized with nitrate and phosphate at a ratio of 16:1 and maintained in the light, while one unamended light mesocosm served as a control. Dissolved nutrients, phytoplankton and bacterial biomass, and phytoplankton community composition were monitored throughout the 26 d experiment. Uptake of (15)N-labeled ammonium and nitrate, and dual-labeled ((15)N and (13)C) urea and dissolved free amino acids (DFAA) was measured for phytoplankton and bacteria using 2 methods: size fractionation into 0.2-0.8 and \u3e 0.8 pm size classes, and flow cytometric sorting based on chlorophyll autofluorescence. Prior to fertilization, dissolved inorganic N concentrations were low and comprised similar to 5% of total dissolved N. Added nitrate was completely utilized in the amended mesocosm within 10 d, stimulating a large bloom of colonial Phaeocystis pouchetii. Ammonium contributed over half of total measured N uptake by phytoplankton and bacteria in both enclosures, while nitrate and urea each supplied roughly 10 to 25%. Overall, DFAA were a negligible N source to phytoplankton but contributed 11 % to total bacterial N uptake. Bacterial uptake represented a significant portion of total uptake of all N forms, especially urea and DFAA. Comparison of the 2 methods for measuring phytoplankton versus bacterial uptake demonstrates how the use of 0.8 mu m filters can lead to significant overestimation of phytoplankton N uptake due to the retention of bacterial biomass