3,738 research outputs found
Multiple independent origins of auto-pollination in tropical orchids (Bulbophyllum) in light of the hypothesis of selfing as an evolutionary dead end
Background: The transition from outcrossing to selfing has long been portrayed as an ‘evolutionary dead end because, first, reversals are unlikely and, second, selfing lineages suffer from higher rates of extinction owing to a reduced potential for adaptation and the accumulation of deleterious mutations. We tested these two predictions in a clade of Madagascan Bulbophyllum orchids (30 spp.), including eight species where auto-pollinating morphs (i.e., selfers, without a ‘rostellum) co-exist with their pollinator-dependent conspecifics (i.e., outcrossers, possessing a rostellum). Specifically, we addressed this issue on the basis of a time-calibrated phylogeny by means of ancestral character reconstructions and within the state-dependent evolution framework of BiSSE (Binary State Speciation and Extinction), which allowed jointly estimating rates of transition, speciation, and extinction between outcrossing and selfing. Results: The eight species capable of selfing occurred in scattered positions across the phylogeny, with two likely originating in the Pliocene (ca. 4.43.1 Ma), one in the Early Pleistocene (ca. 2.4 Ma), and five since the mid-Pleistocene (ca. 1.3 Ma). We infer that this scattered phylogenetic distribution of selfing is best described by models including up to eight independent outcrossing-to-selfing transitions and very low rates of speciation (and either moderate or zero rates of extinction) associated with selfing. Conclusions: The frequent and irreversible outcrossing-to-selfing transitions in Madagascan Bulbophyllum are clearly congruent with the first prediction of the dead end hypothesis. The inability of our study to conclusively reject or support the likewise predicted higher extinction rate in selfing lineages might be explained by a combination of methodological limitations (low statistical power of our BiSSE approach to reliably estimate extinction in small-sized trees) and evolutionary processes (insufficient time elapsed for selfers to go extinct). We suggest that, in these tropical orchids, a simple genetic basis of selfing (via loss of the ‘rostellum) is needed to explain the strikingly recurrent transitions to selfing, perhaps reflecting rapid response to parallel and novel selective environments over Late Quaternary ( 1.3 Ma) time scales.P20726-B03P17124-B0(VLID)243455
Recommended from our members
Compact differential-fed planar filtering antennas
This paper proposes novel low-profile differential-fed planar antennas with embedded sharp frequency selectively. The antennas are compact and easy to integrate with differential devices without matching baluns. The antenna design is formulated as a topology optimization problem, where requirements on impedance bandwidth, directivity, and filtering are used as the design objectives. The optimized antennas operate over the frequency band 6.0-8.5 GHz. The antennas have reflection coefficients below -15 dB, cross-polarization levels below -42 dB, a maximum gain of 6.0 ± 0.5 dB, and a uniform directivity over more than 130° beamwidth angle in the frequency band of interest. In addition, the antennas exhibit sharp roll-off between the operational band and frequencies around the 5.8GHz WiFi band and the 10 GHz X-band. One antenna has been fabricated with a good match between simulation and measurement results. © 2019 by the authors. Licensee MDPI, Basel, Switzerland
Ancestral and derived attributes of the dlx gene repertoire, cluster structure and expression patterns in an African cichlid fish
<p>Abstract</p> <p>Background</p> <p>Cichlid fishes have undergone rapid, expansive evolutionary radiations that are manifested in the diversification of their trophic morphologies, tooth patterning and coloration. Understanding the molecular mechanisms that underlie the cichlids' unique patterns of evolution requires a thorough examination of genes that pattern the neural crest, from which these diverse phenotypes are derived. Among those genes, the homeobox-containing <it>Dlx </it>gene family is of particular interest since it is involved in the patterning of the brain, jaws and teeth.</p> <p>Results</p> <p>In this study, we characterized the <it>dlx </it>genes of an African cichlid fish, <it>Astatotilapia burtoni</it>, to provide a baseline to later allow cross-species comparison within Cichlidae. We identified seven <it>dlx </it>paralogs (<it>dlx1a</it>, <it>-2a</it>, <it>-4a</it>, <it>-3b</it>, <it>-4b</it>, <it>-5a </it>and <it>-6a</it>), whose orthologies were validated with molecular phylogenetic trees. The intergenic regions of three <it>dlx </it>gene clusters (<it>dlx1a-2a</it>, <it>dlx3b-4b</it>, and <it>dlx5a-6a</it>) were amplified with long PCR. Intensive cross-species comparison revealed a number of conserved non-coding elements (CNEs) that are shared with other percomorph fishes. This analysis highlighted additional lineage-specific gains/losses of CNEs in different teleost fish lineages and a novel CNE that had previously not been identified. Our gene expression analyses revealed overlapping but distinct expression of <it>dlx </it>orthologs in the developing brain and pharyngeal arches. Notably, four of the seven <it>A. burtoni dlx </it>genes, <it>dlx2a</it>, <it>dlx3b</it>, <it>dlx4a </it>and <it>dlx5a</it>, were expressed in the developing pharyngeal teeth.</p> <p>Conclusion</p> <p>This comparative study of the <it>dlx </it>genes of <it>A. burtoni </it>has deepened our knowledge of the diversity of the <it>Dlx </it>gene family, in terms of gene repertoire, expression patterns and non-coding elements. We have identified possible cichlid lineage-specific changes, including losses of a subset of <it>dlx </it>expression domains in the pharyngeal teeth, which will be the targets of future functional studies.</p
Additions to the orchid flora of Laos and taxonomic notes on orchids of the Indo-Burma region
The following nine new additions to the orchid flora of Laos PDR are reported based on surveys in the country conducted during the period 2012–2017: Bulbophyllum alcicorne, B. meson, Coelogyne suaveolens, Cyrtosia nana, Dendrobium phuketense, Oberonia rhizoides, Phaius columnaris, Thelasis khasiana and Zeuxine longilabris. The taxonomy of a further 15 orchid taxa (Bulbophyllum guttulatum, B. moniliforme, B. sarcophyllum, B. scabratum, B. seidenfadenii, B. tipula, Cleisostoma lecongkietii, Coelogyne ovalis, Dendrobium chapaense, D. crepidatum, D. wattii, Habenaria gibsonii var. foetida, H. malintana, Luisia zeylanica and Phalaenopsis pulcherrima) native to Laos or adjacent countries is reviewed, resulting in the synonymisation of 20 names. In addition, new combinations are made for Grosourdya vietnamica, Luisia sonii and Holcoglossum gaoligongense to bring them in line with recent changes in the classification of the orchid family
Two thirds of species in a global shark fin trade hub are threatened with extinction: Conservation potential of international trade regulations for coastal sharks
One third of chondrichthyan species (sharks, rays, and chimeras) are threatened with extinction, mainly due to unsustainable fishing. Large accessible international markets for meat and luxury products like dried fins can help drive overfishing by encouraging targeted capture or retention of high-value export species. If this is common, then species in international trade could have heightened extinction risk. Here, we examined the species composition of the Hong Kong shark fin market from 2014 to 2018, finding that traded species disproportionately occur in threatened categories (70.9%) and all premium value species are threatened. A small number of cosmopolitan species dominate the trade, but noncosmopolitan coastal species are still traded at concerning levels given their limited distribution. These coastal species are not generally subject to retention prohibitions, fisheries management, or international trade regulations and without management many could become extinct. The conservation potential of international trade regulations alone for coastal chondrichthyans depends on the extent to which overfishing is driven by export markets; socioeconomic studies of coastal fishing communities are needed to make this determination. Nonetheless, adding international trade regulations for more coastal shark species that are in the fin trade could prompt broad engagement with overfishing in nations lacking effective management
Systematische Bauwerksanalyse mittels ZfP-Verfahren mit anschließenden Belastungsversuchen im Alten Polizeipräsidium in Frankfurt a. M.
Das 1911–1914 errichtete Neue Königliche Polizeipräsidium am Hohenzollernplatz wurde 1944 teilweise zerstört, wiederaufgebaut und über die fast 110-jährige Lebensdauer immer wieder verändert. Im Zuge der geplanten Revitalisierung des heutigen Kulturdenkmals sind unter anderem Eingriffe in die bestehende Tragkonstruktion vorgesehen, welche zu Änderungen der statischen Systeme sowie des Lastabtrags und der Lastweitergabe führen. In diesem Beitrag werden die Aspekte der systematischen Strukturanalyse am Objekt für eine experimentelle Tragwerksbeurteilung erläutert. Durch Voruntersuchungen mithilfe verschiedener Prüfverfahren wurden Deckentypen, deren Spannrichtungen, Aufbauten und deren Verteilung innerhalb des Gebäudes festgestellt. Anschließend wurden, unter Betrachtung der Schnittgrößenänderung aus den geplanten Eingriffen in die bestehende Deckensysteme, experimentelle Tragsicherheitsbewertungen durchgeführt
Recommended from our members
The accumulation of species and recovery of species composition along a 70 year successional gradient in a tropical secondary forest
The majority of global forests are secondary and are at different stages of succession. Assessing the dynamics of species richness and similarity, and quantifying the importance of environmental filtering, dispersal limitation and other stochastic processes are essential to understanding the mechanisms of succession for forest restoration. In this article, we explored the accumulation of species, the relative importance of spatial distance, environmental factors and stand age in determining species composition of a tropical secondary forest succession in Hong Kong. Twenty-eight plots with median age of 7, 20, 39, 61 and over 70 years in the secondary forest were established and surveyed, and the indicator species for each age class were identified. Species composition shows large variation both within and between age classes, while species richness in the old growth forest (>70 yr) was significantly lower than in the mid-age classes. Rarefied species richness showed a rapid accumulation during early succession, but species richness levelled off from 20 yrs onwards. Variation partitioning indicated that spatial distance alone explained 33% of the variation in species composition, followed by environmental distance (8%) and stand age (1%). The results of Nonmetric Multidimensional Scaling suggested that idiosyncratic successional pathways and alternative stable states might be prevalent. Our results suggested dispersal limitation was the main limiting factor in explaining the turnover of species during forest succession, while environmental filtering played a lesser role in shaping species distributions. Our results highlight the importance of active restoration in overcoming the barriers of succession in secondary vegetation in the tropics
On the Transition Rate of the Fe X RED Coronal Line
We present a lifetime measurement of the 3s 23p 5 2 Po 1/2 first excited fine-structure level of the ground state configuration in chlorine-like Fe X, which relaxes to the ground state through a magnetic dipole (M1) transition (the so-called red coronal line) with a wavelength accurately determined to 637.454(1) nm. Moreover, the Zeeman splitting of line was observed. The lifetime of 14.2(2) ms is the most precise one measured in the red wavelength region and agrees well with advanced theoretical predictions and an empirically scaled interpolation based on experimental values from the same isoelectronic sequence
Prospective cohort study using the breast cancer spheroid model as a predictor for response to neoadjuvant therapy--the SpheroNEO study
Background
Aim of this prospective study was to predict response to neoadjuvant therapy in breast cancer patients using an in vitro breast cancer spheroid model.
Methods
Three-dimensional spheroids were directly generated from fresh breast tumor biopsies of 78 patients eligible for neoadjuvant therapy. Cell survival was measured after in vitro exposure to the equivalent therapeutic agents in the breast cancer spheroid model. Treatment results in vitro were correlated with pathological complete response (pCR, i.e. ypT0 ypN0) determined at surgery.
Results
A mean cell survival of 21.8 % was found in the breast cancer spheroid model for 22 patients with pCR versus 63.8 % in 56 patients without pCR (P = .001). The area under the receiver operator characteristic curve to predict pCR was 0.86 (95 % CI: 0.77 to 0.96) for cell survival in vitro compared to 0.80 (95 % CI: 0.70 to 0.90) for a combined model of conventional factors (hormone- and HER2 receptor, and age). A cutoff at 35 % cell survival for the spheroid model was proposed. Out of the 32 patients with values below this threshold, 21 patients (65.6 %) and one patient (2.2 %) with a cell survival greater than 35 % achieved pCR respectively; (sensitivity 95.5 % (95 % CI: 0.86 to 1.00); specificity 80.4 % (95 % CI: 0.70 to 0.91)). Extent of residual disease positively correlated with increased cell survival (P = .021).
Conclusion
The breast cancer spheroid model proved to be a highly sensitive and specific predictor for pCR after neoadjuvant chemotherapy in breast cancer patients
Histological and micro-CT evidence of stigmatic rostellum receptivity promoting auto-pollination in the Madagascan orchid Bulbophyllum bicoloratum
Background: The rostellum, a projecting part of the gynostemium in orchid flowers, separates the anther(s) from the stigma and thus commonly prevents auto-pollination. Nonetheless, as a modified (usually distal) portion of the median stigma lobe, the rostellum has been frequently invoked of having re-gained a stigmatic function in rare cases of orchid auto-pollination. Here it is shown that a newly discovered selfing variant of Madagascan Bulbophyllum bicoloratum has evolved a modified rostellum allowing the penetration of pollen tubes from in situ pollinia. Methods: Gynostemium micro-morphology and anatomy of selfing and outcrossing variants of B. bicoloratum was studied by using light and scanning electron microscopy and histological sections. Pollen tube growth in the selfing variant was further observed via X-ray computed microtomography (micro-CT), providing 3D reconstructions of floral tissues at a micron scale. Findings: Selfing variants possess a suberect (‘displaced) rostellum rather than the conventional, erect type. Very early in anthesis, the pollinia of selfers are released from the anther and slide down onto the suberect rostellum, where pollen tube growth preferentially occurs through the non-vascularized, i.e. rear (adaxial) and (semi-) lateral parts. This penetrated tissue is comprised of a thin layer of elongate and loosely arranged cells, embedded in stigmatic exudates, as also observed in the stigmatic cavity of both selfing and outcrossing variants. Conclusions: Our results provide the first solid evidence of a stigmatic function for the rostellum in orchid flowers, thereby demonstrating for the first time the feasibility of the micro-CT technique for accurately visualizing pollen tube growth in flowering plants. Rostellum receptivity in B. bicoloratum probably uniquely evolved as an adaptation for reproductive assurance from an outcrossing ancestor possessing an erect (non-receptive) rostellum. These findings open up new avenues in the investigation of an organ that apparently re-gained its ‘primordial function of being penetrated by pollen tubes.P20726-B03P17124-B0(VLID)170467
- …