Experimental Implementation of Remote State Preparation by Nuclear Magnetic Resonance

We have experimentally implemented remote state preparation (RSP) of a qubit from a hydrogen to a carbon nucleus in molecules of carbon-13 labeled chloroform $^{13}$CHCl$_{3}$ over interatomic distances using liquid-state nuclear magnetic resonance (NMR) technique. Full RSP of a special ensemble of qubits, i.e., a qubit chosen from equatorial and polar great circles on a Bloch sphere with Pati's scheme, was achieved with one cbit communication. Such a RSP scheme can be generalized to prepare a large number of qubit states and may be used in other quantum information processing and quantum computing.Comment: 10 pages,5 PS figure

Experimental realization of a highly structured search algorithm

The highly structured search algorithm proposed by Hogg[Phys.Rev.Lett. 80,2473(1998)] is implemented experimentally for the 1-SAT problem in a single search step by using nuclear magnetic resonance technique with two-qubit sample. It is the first demonstration of the Hogg's algorithm, and can be readily extended to solving 1-SAT problem for more qubits in one step if the appropriate samples possessing more qubits are experimentally feasible.Comment: RevTex, 11 pages + 3 pages of figure

Preparation of pseudo-pure states by line-selective pulses in Nuclear Magnetic Resonance

A new method of preparing the pseudo-pure state of a spin system for quantum computation in liquid nuclear magnetic resonance (NMR) was put forward and demonstrated experimentally. Applying appropriately connected line-selective pulses simultaneously and a field gradient pulse techniques we acquired straightforwardly all pseudo-pure states for two qubits in a single experiment much efficiently. The signal intensity with the pseudo-pure state prepared in this way is the same as that of temporal averaging. Our method is suitable for the system with arbitrary numbers of qubits. As an example of application, a highly structured search algorithm----Hogg's algorithm was also performed on the pseudo-pure state $\mid 00>$ prepared by our method.Comment: RevTEX,10 pages,5 PS figure

Genome-wide and single-base resolution DNA methylomes of the Pacific oyster <i>Crassostrea gigas</i> provide insight into the evolution of invertebrate CpG methylation

BACKGROUND: Studies of DNA methylomes in a wide range of eukaryotes have revealed both conserved and divergent characteristics of DNA methylation among phylogenetic groups. However, data on invertebrates particularly molluscs are limited, which hinders our understanding of the evolution of DNA methylation in metazoa. The sequencing of the Pacific oyster Crassostrea gigas genome provides an opportunity for genome-wide profiling of DNA methylation in this model mollusc. RESULTS: Homologous searches against the C. gigas genome identified functional orthologs for key genes involved in DNA methylation: DNMT1, DNMT2, DNMT3, MBD2/3 and UHRF1. Whole-genome bisulfite sequencing (BS-seq) of the oyster’s mantle tissues revealed that more than 99% methylation modification was restricted to cytosines in CpG context and methylated CpGs accumulated in the bodies of genes that were moderately expressed. Young repeat elements were another major targets of CpG methylation in oysters. Comparison with other invertebrate methylomes suggested that the 5’-end bias of gene body methylation and the negative correlation between gene body methylation and gene length were the derived features probably limited to the insect lineage. Interestingly, phylostratigraphic analysis showed that CpG methylation preferentially targeted genes originating in the common ancestor of eukaryotes rather than the oldest genes originating in the common ancestor of cellular organisms. CONCLUSIONS: Comparative analysis of the oyster DNA methylomes and that of other animal species revealed that the characteristics of DNA methylation were generally conserved during invertebrate evolution, while some unique features were derived in the insect lineage. The preference of methylation modification on genes originating in the eukaryotic ancestor rather than the oldest genes is unexpected, probably implying that the emergence of methylation regulation in these 'relatively young’ genes was critical for the origin and radiation of eukaryotes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-1119) contains supplementary material, which is available to authorized users

An interferometric complementarity experiment in a bulk Nuclear Magnetic Resonance ensemble

We have experimentally demonstrated the interferometric complementarity, which relates the distinguishability $D$ quantifying the amount of which-way (WW) information to the fringe visibility $V$ characterizing the wave feature of a quantum entity, in a bulk ensemble by Nuclear Magnetic Resonance (NMR) techniques. We primarily concern on the intermediate cases: partial fringe visibility and incomplete WW information. We propose a quantitative measure of $D$ by an alternative geometric strategy and investigate the relation between $D$ and entanglement. By measuring $D$ and $V$ independently, it turns out that the duality relation $D^{2}+V^{2}=1$ holds for pure quantum states of the markers.Comment: 13 page, 5 PS figure

Experimental Implementation of Hogg's Algorithm on a Three-Quantum-bit NMR Quantum Computer

Using nuclear magnetic resonance (NMR) techniques with three-qubit sample, we have experimentally implemented the highly structured algorithm for the 1-SAT problem proposed by Hogg. A simplified temporal averaging procedure was employed to the three-qubit spin pseudo-pure state. The algorithm was completed with only a single evaluation of structure of the problem and the solutions were found with probability 100%, which outperform both unstructured quantum and the best classical search algorithm.Comment: Revtex, 14 pages and 1 table, 4 EPS figure

Experimental Implementaton of Dense Coding Using Nuclear Magnetic Resonance

Quantum dense coding has been demonstrated experimentally in terms of quantum logic gates and circuits in quantum computation and NMR technique. Two bits of information have been transmitted through manipulating one of the maximally entangled two-state quantum pair, which is completely consistent with the original ideal of Bennett-Wiesner proposal. Although information transmission happens between spins over inter-atomic distance, the scheme of entanglement transformation and measurement can be used in other processes of quantum information and quantum computing.Comment: Some print errors have been corrected, 15 pages, RevTex, 11 figure

The oyster genome reveals stress adaptation and complexity of shell formation

The Pacific oyster Crassostrea gigas belongs to one of the most species-rich but genomically poorly explored phyla, the Mollusca. Here we report the sequencing and assembly of the oyster genome using short reads and a fosmid-pooling strategy, along with transcriptomes of development and stress response and the proteome of the shell. The oyster genome is highly polymorphic and rich in repetitive sequences, with some transposable elements still actively shaping variation. Transcriptome studies reveal an extensive set of genes responding to environmental stress. The expansion of genes coding for heat shock protein 70 and inhibitors of apoptosis is probably central to the oyster's adaptation to sessile life in the highly stressful intertidal zone. Our analyses also show that shell formation in molluscs is more complex than currently understood and involves extensive participation of cells and their exosomes. The oyster genome sequence fills a void in our understanding of the Lophotrochozoa. © 2012 Macmillan Publishers Limited. All rights reserved