2,199 research outputs found
Current Distribution and random matrix ensembles for an integrable asymmetric fragmentation process
We calculate the time-evolution of a discrete-time fragmentation process in
which clusters of particles break up and reassemble and move stochastically
with size-dependent rates. In the continuous-time limit the process turns into
the totally asymmetric simple exclusion process (only pieces of size 1 break
off a given cluster). We express the exact solution of master equation for the
process in terms of a determinant which can be derived using the Bethe ansatz.
From this determinant we compute the distribution of the current across an
arbitrary bond which after appropriate scaling is given by the distribution of
the largest eigenvalue of the Gaussian unitary ensemble of random matrices.
This result confirms universality of the scaling form of the current
distribution in the KPZ universality class and suggests that there is a link
between integrable particle systems and random matrix ensembles.Comment: 11 page
Noise in laser speckle correlation and imaging techniques
We study the noise of the intensity variance and of the intensity correlation
and structure functions measured in light scattering from a random medium in
the case when these quantities are obtained by averaging over a finite number N
of pixels of a digital camera. We show that the noise scales as 1/N in all
cases and that it is sensitive to correlations of signals corresponding to
adjacent pixels as well as to the effective time averaging (due to the finite
sampling time) and spatial averaging (due to the finite pixel size). Our
results provide a guide to estimation of noise level in such applications as
the multi-speckle dynamic light scattering, time-resolved correlation
spectroscopy, speckle visibility spectroscopy, laser speckle imaging etc.Comment: submitted 14 May 201
Wide bandwidth integrated 1-4 GHz feed development for VLBI and SKA
Wide-band single pixel feeds such as the wide-band Eleven feed developed in Europe through Onsala Space Observatory/Chalmers are rapidly increasing in maturity. Compared to the traditional octave bandwidth feeds, wide bandwidth feeds, such as the Eleven feed, will create the possibility of significantly larger instantaneous frequency coverage observations with existing radio telescopes, such as those used in the VLBI networks, and for future radio telescopes, such as the Square Kilometre Array. This Project is supported by RadioNet3, Developments In VLBI Astronomy (DIVA)
Predicting Secondary Structures, Contact Numbers, and Residue-wise Contact Orders of Native Protein Structure from Amino Acid Sequence by Critical Random Networks
Prediction of one-dimensional protein structures such as secondary structures
and contact numbers is useful for the three-dimensional structure prediction
and important for the understanding of sequence-structure relationship. Here we
present a new machine-learning method, critical random networks (CRNs), for
predicting one-dimensional structures, and apply it, with position-specific
scoring matrices, to the prediction of secondary structures (SS), contact
numbers (CN), and residue-wise contact orders (RWCO). The present method
achieves, on average, accuracy of 77.8% for SS, correlation coefficients
of 0.726 and 0.601 for CN and RWCO, respectively. The accuracy of the SS
prediction is comparable to other state-of-the-art methods, and that of the CN
prediction is a significant improvement over previous methods. We give a
detailed formulation of critical random networks-based prediction scheme, and
examine the context-dependence of prediction accuracies. In order to study the
nonlinear and multi-body effects, we compare the CRNs-based method with a
purely linear method based on position-specific scoring matrices. Although not
superior to the CRNs-based method, the surprisingly good accuracy achieved by
the linear method highlights the difficulty in extracting structural features
of higher order from amino acid sequence beyond that provided by the
position-specific scoring matrices.Comment: 20 pages, 1 figure, 5 tables; minor revision; accepted for
publication in BIOPHYSIC
Clonal diversity and genealogical relationships of gibel carp in four hatcheries
To conserve and utilize the genetic pool of gynogenetic gibel carp (Carassius auratus gibelio), the Fangzheng and Qihe stock hatcheries have been established in China. However, little information is available on the amount of genetic variation within and between these populations. In this study, clonal diversity in 101 fish from these two stock hatcheries and 35 fish from two other hatcheries in Wuhan and Pengze respectively was analysed for variation in serum transferrin. Thirteen clones were found in Fangzheng and Qihe, of which 12 were novel. Six clones were specific to Fangzheng and three specific to Qihe, whereas four were shared among the Fangzheng and Qihe fish. To obtain more knowledge on genetic diversity and genealogical relationships within gibel carp, the complete mitochondrial DNA (mtDNA) control region (similar to 920 bp) was sequenced in 64 individuals representing all 14 clones identified in the four hatcheries. Differences in the mtDNA sequences varied remarkably among hatcheries, with the Fangzheng and Qihe lines demonstrating high diversity and Wuhan and Pengze showing no variation. The Fangzheng and Qihe lines might represent two distinct matrilineal sources. One of the Qihe samples carried the haplotype shared by a most widely cultivated Fangzheng clone, indicating that a Fangzheng clone escaped from cultivated ponds and moved into the Qihe hatchery. Four Fangzheng samples clustered within the lineage formed mainly by Qihe samples, most likely reflecting historical gene flow from Qihe to Fangzheng. It is suggested that clones in Wuhan originated from Fangzheng, consistent with their introduction history, supporting the hypothesis that gibel carp in Pengze were domesticated from individuals in the Fangzheng hatchery.To conserve and utilize the genetic pool of gynogenetic gibel carp (Carassius auratus gibelio), the Fangzheng and Qihe stock hatcheries have been established in China. However, little information is available on the amount of genetic variation within and between these populations. In this study, clonal diversity in 101 fish from these two stock hatcheries and 35 fish from two other hatcheries in Wuhan and Pengze respectively was analysed for variation in serum transferrin. Thirteen clones were found in Fangzheng and Qihe, of which 12 were novel. Six clones were specific to Fangzheng and three specific to Qihe, whereas four were shared among the Fangzheng and Qihe fish. To obtain more knowledge on genetic diversity and genealogical relationships within gibel carp, the complete mitochondrial DNA (mtDNA) control region (similar to 920 bp) was sequenced in 64 individuals representing all 14 clones identified in the four hatcheries. Differences in the mtDNA sequences varied remarkably among hatcheries, with the Fangzheng and Qihe lines demonstrating high diversity and Wuhan and Pengze showing no variation. The Fangzheng and Qihe lines might represent two distinct matrilineal sources. One of the Qihe samples carried the haplotype shared by a most widely cultivated Fangzheng clone, indicating that a Fangzheng clone escaped from cultivated ponds and moved into the Qihe hatchery. Four Fangzheng samples clustered within the lineage formed mainly by Qihe samples, most likely reflecting historical gene flow from Qihe to Fangzheng. It is suggested that clones in Wuhan originated from Fangzheng, consistent with their introduction history, supporting the hypothesis that gibel carp in Pengze were domesticated from individuals in the Fangzheng hatchery
A sufficient criterion for integrability of stochastic many-body dynamics and quantum spin chains
We propose a dynamical matrix product ansatz describing the stochastic
dynamics of two species of particles with excluded-volume interaction and the
quantum mechanics of the associated quantum spin chains respectively. Analyzing
consistency of the time-dependent algebra which is obtained from the action of
the corresponding Markov generator, we obtain sufficient conditions on the
hopping rates for identifing the integrable models. From the dynamical algebra
we construct the quadratic algebra of Zamolodchikov type, associativity of
which is a Yang Baxter equation. The Bethe ansatz equations for the spectra are
obtained directly from the dynamical matrix product ansatz.Comment: 19 pages Late
The spin-1/2 XXZ Heisenberg chain, the quantum algebra U_q[sl(2)], and duality transformations for minimal models
The finite-size scaling spectra of the spin-1/2 XXZ Heisenberg chain with
toroidal boundary conditions and an even number of sites provide a projection
mechanism yielding the spectra of models with a central charge c<1 including
the unitary and non-unitary minimal series. Taking into account the
half-integer angular momentum sectors - which correspond to chains with an odd
number of sites - in many cases leads to new spinor operators appearing in the
projected systems. These new sectors in the XXZ chain correspond to a new type
of frustration lines in the projected minimal models. The corresponding new
boundary conditions in the Hamiltonian limit are investigated for the Ising
model and the 3-state Potts model and are shown to be related to duality
transformations which are an additional symmetry at their self-dual critical
point. By different ways of projecting systems we find models with the same
central charge sharing the same operator content and modular invariant
partition function which however differ in the distribution of operators into
sectors and hence in the physical meaning of the operators involved. Related to
the projection mechanism in the continuum there are remarkable symmetry
properties of the finite XXZ chain. The observed degeneracies in the energy and
momentum spectra are shown to be the consequence of intertwining relations
involving U_q[sl(2)] quantum algebra transformations.Comment: This is a preprint version (37 pages, LaTeX) of an article published
back in 1993. It has been made available here because there has been recent
interest in conformal twisted boundary conditions. The "duality-twisted"
boundary conditions discussed in this paper are particular examples of such
boundary conditions for quantum spin chains, so there might be some renewed
interest in these result
Convection in colloidal suspensions with particle-concentration-dependent viscosity
The onset of thermal convection in a horizontal layer of a colloidal
suspension is investigated in terms of a continuum model for binary-fluid
mixtures where the viscosity depends on the local concentration of colloidal
particles. With an increasing difference between the viscosity at the warmer
and the colder boundary the threshold of convection is reduced in the range of
positive values of the separation ratio psi with the onset of stationary
convection as well as in the range of negative values of psi with an
oscillatory Hopf bifurcation. Additionally the convection rolls are shifted
downwards with respect to the center of the horizontal layer for stationary
convection (psi>0) and upwards for the Hopf bifurcation (psi<0).Comment: 8 pages, 6 figures, submitted to European Physical Journal
Template-Free Synthesis and Enhanced Photocatalytic Performance of Uniform BiOCl Flower-Like Microspheres
Preparation of uniform BiOCl flower-like microspheres was facilely accomplished through a simple protocol involving regulation of pH value in aqueous with sodium hydroxide in the presence of n-propanol. The as-prepared samples were characterized by a collection of techniques, such as X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), energy dispersive X-ray spectroscopy (EDX), UV-vis diffuse reflectance spectroscopy (UV-vis DRS), and nitrogen adsorption-desorption isotherms. Based upon the SEM analyses, uniform microspheres could be formed with coexistence of some fragments of BiOCl nanosheets without n-propanol. The addition of appropriate amount of n-propanol was beneficial to provide BiOCl samples containing only flower-like microspheres, which were further subjected to the photocatalytic measurements towards Rhodamine B in aqueous under visible light irradiation and exhibited the best catalytic performance among all samples tested. In addition, the photocatalytic process was confirmed to undergo through a photosensitization pathway, in which superoxide radicals (center dot O-2(-)) played critical roles
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