859 research outputs found
The role of surface charge in the interaction of nanoparticles with model pulmonary surfactants
Inhaled nanoparticles traveling through the airways are able to reach the
respiratory zone of the lungs. In such event, the incoming particles first
enter in contact with the liquid lining the alveolar epithelium, the pulmonary
surfactant. The pulmonary surfactant is composed of lipids and proteins that
are assembled into large vesicular structures. The question of the nature of
the biophysicochemical interaction with the pulmonary surfactant is central to
understand how the nanoparticles can cross the air-blood barrier. Here we
explore the phase behavior of sub-100 nm particles and surfactant substitutes
in controlled conditions. Three types of surfactant mimetics, including the
exogenous substitute Curosurf, a drug administred to infants with respiratory
distress syndrome are tested together with aluminum oxide (Al2O3), silicon
dioxide (SiO2) and polymer (latex) nanoparticles. The main result here is the
observation of the spontaneous nanoparticle-vesicle aggregation induced by
Coulombic attraction. The role of the surface charges is clearly established.
We also evaluate the supported lipid bilayer formation recently predicted and
find that in the cases studied these structures do not occur. Pertaining to the
aggregate internal structure, fluorescence microscopy ascertains that the
vesicles and particles are intermixed at the nano- to microscale. With
particles acting as stickers between vesicles, it is anticipated that the
presence of inhaled nanomaterials in the alveolar spaces could significantly
modify the interfacial and bulk properties of the pulmonary surfactant and
interfere with the lung physiology.Comment: 20 pages, 6 figure
Biophysicochemical interaction of a clinical pulmonary surfactant with nano-alumina
We report on the interaction of pulmonary surfactant composed of
phospholipids and proteins with nanometric alumina (Al2O3) in the context of
lung exposure and nanotoxicity. We study the bulk properties of
phospholipid/nanoparticle dispersions and determine the nature of their
interactions. The clinical surfactant Curosurf, both native and extruded, and a
protein-free surfactant are investigated. The phase behavior of mixed
surfactant/particle dispersions was determined by optical and electron
microscopy, light scattering and zeta potential measurements. It exhibits broad
similarities with that of strongly interacting nanosystems such as polymers,
proteins or particles, and supports the hypothesis of electrostatic
complexation. At a critical stoichiometry, micron sized aggregates arising from
the association between oppositely charged vesicles and nanoparticles are
formed. Contrary to the models of lipoprotein corona or of particle wrapping,
our work shows that vesicles maintain their structural integrity and trap the
particles at their surfaces. The agglomeration of particles in surfactant phase
is a phenomenon of importance since it could change the interactions of the
particles with lung cells.Comment: 19 pages 9 figure
Binary continuous random networks
Many properties of disordered materials can be understood by looking at
idealized structural models, in which the strain is as small as is possible in
the absence of long-range order. For covalent amorphous semiconductors and
glasses, such an idealized structural model, the continuous-random network, was
introduced 70 years ago by Zachariasen. In this model, each atom is placed in a
crystal-like local environment, with perfect coordination and chemical
ordering, yet longer-range order is nonexistent. Defects, such as missing or
added bonds, or chemical mismatches, however, are not accounted for. In this
paper we explore under which conditions the idealized CRN model without defects
captures the properties of the material, and under which conditions defects are
an inherent part of the idealized model. We find that the density of defects in
tetrahedral networks does not vary smoothly with variations in the interaction
strengths, but jumps from close-to-zero to a finite density. Consequently, in
certain materials, defects do not play a role except for being thermodynamical
excitations, whereas in others they are a fundamental ingredient of the ideal
structure.Comment: Article in honor of Mike Thorpe's 60th birthday (to appear in J.
Phys: Cond Matt.
Efficient tight-binding Monte Carlo structural sampling of complex materials
While recent work towards the development of tight-binding and ab-initio
algorithms has focused on molecular dynamics, Monte Carlo methods can often
lead to better results with relatively little effort. We present here a
multi-step Monte Carlo algorithm that makes use of the possibility of quickly
evaluating local energies. For the thermalization of a 1000-atom configuration
of {\it a}-Si, this algorithm gains about an order of magnitude in speed over
standard molecular dynamics. The algorithm can easily be ported to a wide range
of materials and can be dynamically optimized for a maximum efficiency.Comment: 5 pages including 3 postscript figure
The Kinetic Activation-Relaxation Technique: A Powerful Off-lattice On-the-fly Kinetic Monte Carlo Algorithm
Many materials science phenomena, such as growth and self-organisation, are
dominated by activated diffusion processes and occur on timescales that are
well beyond the reach of standard-molecular dynamics simulations. Kinetic Monte
Carlo (KMC) schemes make it possible to overcome this limitation and achieve
experimental timescales. However, most KMC approaches proceed by discretizing
the problem in space in order to identify, from the outset, a fixed set of
barriers that are used throughout the simulations, limiting the range of
problems that can be addressed. Here, we propose a more flexible approach --
the kinetic activation-relaxation technique (k-ART) -- which lifts these
constraints. Our method is based on an off-lattice, self-learning, on-the-fly
identification and evaluation of activation barriers using ART and a
topological description of events. The validity and power of the method are
demonstrated through the study of vacancy diffusion in crystalline silicon.Comment: 5 pages, 4 figure
Energy landscape of relaxed amorphous silicon
We analyze the structure of the energy landscape of a well-relaxed 1000-atom
model of amorphous silicon using the activation-relaxation technique (ART
nouveau). Generating more than 40,000 events starting from a single minimum, we
find that activated mechanisms are local in nature, that they are distributed
uniformly throughout the model and that the activation energy is limited by the
cost of breaking one bond, independently of the complexity of the mechanism.
The overall shape of the activation-energy-barrier distribution is also
insensitive to the exact details of the configuration, indicating that
well-relaxed configurations see essentially the same environment. These results
underscore the localized nature of relaxation in this material.Comment: 8 pages, 12 figure
Traveling through potential energy landscapes of disordered materials: the activation-relaxation technique
A detailed description of the activation-relaxation technique (ART) is
presented. This method defines events in the configurational energy landscape
of disordered materials, such as a-Si, glasses and polymers, in a two-step
process: first, a configuration is activated from a local minimum to a nearby
saddle-point; next, the configuration is relaxed to a new minimum; this allows
for jumps over energy barriers much higher than what can be reached with
standard techniques. Such events can serve as basic steps in equilibrium and
kinetic Monte Carlo schemes.Comment: 7 pages, 2 postscript figure
A Dioxane Template for Highly Selective Epoxy Alcohol Cyclizations
Ladder polyether natural products are a class of natural products denoted by their high functional-group density and large number of well-defined stereocenters. They comprise the toxic component of harmful algal blooms (HABs), having significant negative economic and environmental ramifications. However, their mode of action, namely blocking various cellular ion channels, also denotes their promise as potential anticancer agents. Understanding their potential mode of biosynthesis will not only help with developing ways to limit the damage of HABs, but would also facilitate the synthesis of a range of analogs with interesting biological activity. 1,3-Dioxan-5-ol substrates display remarkable ‘enhanced template effects’ in water-promoted epoxide cyclization processes en route to the synthesis of these ladder polyether natural products. In many cases, they provide near complete endo-to-exo selectivity in the cyclization of epoxy alcohols, thereby strongly favoring the formation of tetrahydropyran (THP) over tetrahydrofuran (THF) rings. The effects of various Brønsted and Lewis acidic and basic conditions are explored to demonstrate the superior selectivity of the template over the previously reported THP-based epoxy alcohols. In addition, the consideration of other synthetic routes are also considered with the goal of gaining rapid access to a plethora of potential starting materials applicable towards the synthesis of ladder polyethers. Finally, cascade sequences with polyepoxides are investigated, further demonstrating the versatility of this new reaction template.National Institute of General Medical Sciences (U.S.) (Grant GM72566)Natural Sciences and Engineering Research Council of CanadaFonds québécois de la recherche sur la nature et les technologie
Dynamics of Lennard-Jones clusters: A characterization of the activation-relaxation technique
The potential energy surface (PES) of Lennard-Jones clusters is investigated
using the activation-relaxation technique (ART). This method defines events in
the configurational energy landscape as a two-step process: (a) a configuration
is first activated from a local minimum to a nearby saddle-point and (b) is
then relaxed to a new minimum. Although ART has been applied with success to a
wide range of materials such as a-Si, a-SiO2 and binary Lennard-Jones glasses,
questions remain regarding the biases of the technique. We address some of
these questions in a detailed study of ART-generated events in Lennard-Jones
(LJ) clusters, a system for which much is already known. In particular, we
study the distribution of saddle-points, the pathways between configurations,
and the reversibility of paths. We find that ART can identify all trajectories
with a first-order saddle point leaving a given minimum, is fully reversible,
and samples events following the Boltzmann weight at the saddle point.Comment: 8 pages, 7 figures in postscrip
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